Mining the Web for the patterns in the Real World

Ever since I first discovered it, I loved the idea of the Moodgrapher and I wish it continued to be developed (not all the functions work any more). What it does is plot, in various ways, changes in “moods” as reported by users of LiveJournal.
For instance, you can see the spike of “ecstatic” on the evening of November 4th, when Obama’s victory became official:
ecstatic-old.ploticus.moodgraph.jpg
Or you can track cyclic trends – here is “awake”:
awake.graph.jpg
I wish the tools could be refined even better, for instance narrowing down the time to just an hour or two or broadening it to months or years.
It would be also nice to narrow it by geography – imagine looking at various happy and unhappy moods displayed on LJ over the course of two hours after the Obama victory announcement narrowed down to country, state, county, precinct or even neighborhood, then comparing this with the official votes? We could figure out, for instance, if conservatives or liberals tend to use LJ more, or to use mood sign on LJ more, or if there are places in the country in which the electoral results are more emotional, perhaps correlated to the narrowness of results or to presence of advertising.
Of course, one can also use Google for similar kinds of tracking. For instance, one can use it to track seasonal events:
hummingbirds%20vs.%20orioles.jpg
Again, it would be nice to be able to set the precise time limits to just an hour or to many years, as well as to restrict them to geographic locations – especially for the appearance of migratory birds and such cases.
Anyone know any more tricks like these, stuff that can be used to track natural or social phenomena by tracking how the Internet responds to them?

Nudity? On this blog?

Paul Sunstone: Why Bother to Promote A Healthy Attitude Towards Nudity?

On the other hand, there are at least two, broad reasons for somewhat caring how nudity is viewed (shameless pun intended). First, the notion that nudity is scandalous, immoral, and even dangerous contributes to all sorts of socio-political absurdities.
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Perhaps another reason we should be a little concerned about how nudity is thought of are the many studies that suggest a more healthy attitude towards nudity has profound benefits — especially for women. Here are the results of just three such studies:

The Millionth Comment Winner is….

….drumroll….
Peggy Kolm! You can find Peggy on Biology in Science Fiction and Women in Science blogs.
The prize is a trip to NYCity, a brunch with bloggers, museum trips, lab tours and a big SciBlings-made gift basket.
Congratulations!

What’s New in Life Science Research

Scienceblogs.com is…

…hosting a limited-run group blog called What’s New in Life Science Research, which will cover four separate topics in biotechnology: stem cells, cloning, biodefense, and genetically modified organisms. The blog is sponsored by Invitrogen, but like the Shell-sponsored Next Generation Energy blog, the bloggers (including our own Janet Stemwedel and Mike the Mad Biologist) will have complete editorial control over the content of their posts – we will merely provide questions about each topic to guide the conversation.

Go forth and comment….

What goes around comes around

For instance, the Earth going around the Sun instead of vice versa. Or Copernicus starting the Scientific Revolution which eventually brought about the technology – DNA fingerprinting – that could be used to positively identify Copernicus’ remains.

Self-Censorship in Science Museums

From Museum 2.0, a marvelous blog I discovered last night:
Self-Censorship for Museum Professionals:

There are lots of things visitors can’t do in museums. But what about the things that museum professionals can’t (or feel they can’t) do? This week at the ASTC conference, Kathy McLean, Tom Rockwell, Eric Siegel and I presented a session called “You Can’t Do That in Museums!” in which we explored the peculiarities of self-censorship in the creation of museum exhibitions.
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1. Self-censorship is different in different museum types. In science and technology centers, there are some “can’t”s that are alive and well in other museums. For example, “Nazi science” came up several times as a “can’t”–but the Holocaust Museum’s Deadly Medicine exhibition was a successful project that didn’t bring the walls down. And while narrative-based museums have long dispensed with the concept that museums present a neutral point of view, science centers still feel that their trustworthiness rests on their objectivity. This is not to say that science centers are more censored than art or history museums–every kind of museum has its own hang-ups. Imagine an art museum that allowed patrons to bang on the exhibits the way you can in a science center.
2. Focusing on youth audiences can lead to heavy and sometimes inappropriate self-censorship. Our desire to “protect kids”–which reflects twenty years of clamping down (at least in the U.S.) on kids’ freedom–keeps science and technology museums from hard topics and edgy presentation styles. As Eric said at one point, “kids–our target audience–are living in a world of things they choose to consume that is so full of sex, so full of irony, so full of subjectivity, and when they come to the museum it is one of the few places in the world they don’t see that stuff. And so my question is, why are we keeping them away? Why aren’t we developing our audiences?”
3. Science is political, and science museums have a hard time grappling with that fact. Tom compared public perception of racial intelligence to that of sexual orientation, commenting that over the last thirty years, the left has advocated to have racial intelligence categorized as nurture and sexual orientation categorized as nature. The right advocates for the opposite. The way we think about science–and possibly the way we do it–is connected to our political leanings.
4. Museum professionals don’t have the tools to make wise decisions about when and why to self-censor. Many people mentioned the intelligent design/evolution debate, raising examples of angry homeschoolers and religious groups. Few were able to articulate a response policy that wasn’t based entirely on the volume of the ire raised. If you do offend, ask yourself–who do you offend and why? Do they have a valid claim or not? Do they represent a major constituency or not? One woman shared an anecdote about a label at a zoo that suggested that humans are crowding out elephants. She was pleased to receive angry letters about the label. It let her know that people were reading it and cared.
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Over 100 participants contributed post-its to the comfort map (shown at right) with examples in the categories of “safe,” “iffy,” and “no way.” As you can see, most of the examples were in the iffy category–the hazy borders of our comfort. To that end, I have captured the examples on the post-its in five categories, separating the “iffy” layer into three categories (creatively named 1, 2, 3). Here are the words that came up on the comfort zone map:

Read the whole thing….

Scientists Papercraft Models

Go here to find out how to make paper Darwin, Einstein, Sagan and more….

Ideas for Change in America

Change.org/ideas (not the official Change.gov) is a place where people can post ideas for the Obama administration and readers can, Digg-like, vote the ideas up and down. This is how it works:

What is Ideas for Change in America?
Ideas for Change in America is a citizen-driven project that aims to identify and create momentum around the best ideas for how the Obama Administration and 111th Congress can turn the broad call for “change” across the country into specific policies.
The project is nonpartisan, and invites all political points of view. It is not connected to the Obama campaign or the Obama Administration.
Who’s behind it?
Ideas for Change in America is a project of Change.org, an online community and media network for social issues, in partnership with more than three dozen leading organizations, including MySpace, techPresident, the Sunlight Foundation, Netroots Nation, Declare Yourself, Student PIRGs, Voto Latino, HeadCount, and Change Congress.
How does it work?
Anyone can submit an idea and comment and vote on others. The top 10 rated ideas will be presented to the Obama Administration on Inauguration Day, January 20, 2009 as the “Top 10 Ideas for America.” We will then launch a national campaign behind each idea and mobilize the collective energy of the millions of members of Change.org, MySpace, and partner organizations to ensure that each winning idea gets the full consideration of the Obama Administration and Members of Congress.
How are the top ideas determined?
The “Top 10 Ideas for America” will be determined through two rounds of voting. In the first round, ideas will compete against other ideas in the same issue category. The first round will end on December 31, 2008, and the top 3 rated ideas from each category will make it into the second round. The second round of voting will begin on Monday, January 5, and each qualifying idea will compete against the qualifying ideas from all other categories. Second round voting will end on Thursday, January 15.
What happens after voting?
Our work does not end with the voting process or the delivery of the top 10 ideas to the Obama Administration on Inauguration Day. That is rather the end of the beginning. Instead of passively hoping the administration accepts each top idea, we will select a formal nonprofit sponsor for each idea to help create a nationwide movement to lobby the administration and Congress to turn the idea into real policy.
What should my idea be about?
Ideas can be about anything that you would like to see the Obama Administration or Congress change in America. We have established more than 30 causes, but you can include in the “other” category for something that doesn’t quite fit any of these.
Does my idea have to be original?
No. While we encourage you to take an original approach, you may submit an idea originally conceived by someone else. However, we encourage you to cite original source of the idea if known, and you may not directly copy text from an idea posted by another user.

There are some interesting and even good ideas there already, so look around and vote.
I really like this idea by Jay Rosen:

Pick one or two problems at a time that are well-suited to the “open call” method
“Your ideas can help change the future of the country,” says the front page of change.gov. The Obama Administration cannot make good on its promise to solicit solutions from the American people by pretending that all problems are equally treatable that way, or allowing a vague pledge like that to sit there without creative action on it. And so: Obama and his advisors should select one or two problems at a time that are particularly well-suited to “open source” solutions, where ideas and suggestions can come from anywhere. They would then have to find the tools and a practical method for gathering, sifting, condensing and forwarding all that intelligence to the right people. Then it could be compared to solutions emerging in the more traditional–and bureaucratic–way.
An example might be throwing open to the tech community the problem of replacing the FBI’s obsolete Automated Case Support system with new software, an effort that collapsed in 2005 and cost the taxpayers hundreds of millions of dollars. Whether my FBI example is the right kind of challenge or not–and maybe it isn’t–the point is there are some problems where an “open call” is more likely to produce a useful and smart result. The Obama White House should make some smart, strategic choices to carefully frame and highlight one or two (no more than three!) such initiatives for a limited period of time to see if this method generates alternatives that may not have come to light through other means.

This idea is currently in 7th Place in Government Reform and needs 11 more votes to make it into the second round. Perhaps you can help it get there….by going here and voting.

The Open Laboratory 2008 – less than a week left!

You have only 6 days left to dig through your Archives for your best posts since December 20th 2007 and submit them. Submit one, or two, or several – no problem. Or ask your readers to submit for you.
Only submissions received through this form are valid.
Then take a look at your favourite bloggers and pick some of their best posts – don’t worry, we can deal with duplicate entries. Do not forget new and up-coming blogs – they may not know about the anthology – and submit their stuff as well.
As we did last year, we encourage you to also send in original poems and cartoons.
Keep in mind that the posts will be printed in a book! A post that relies heavily on links, long quotes, copyrighted pictures, movies, etc., will not translate well into print.
The deadline is December 1st, 2008. at midnight EST – just six days to go!
Below are submissions so far. Check them out and get inspired. If you see that one of your posts is at an old URL and you have since moved, re-submit with the new URL (perhaps re-post it if necessary).
Posting URLs in the comments does not work. Go down to the bottom of this post (or to the sidebar of this blog) and click on the “Submit to OpenLab2008” button. Or click here.

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Today’s carnivals

Grand Rounds 5:10 are up on Canadian Medicine
The 59th edition of Encephalon is up on Ionian Enchantment

My picks from ScienceDaily

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Clock Quotes

The printing press is either the greatest blessing or the greatest curse of modern times, sometimes one forgets which it is.
– James Matthew Barrie

New and Exciting in PLoS this week

There are new articles published tonight in PLoS Biology, PLoS Medicine, PLoS ONE and PLoS Neglected Tropical Diseases – here are my picks:

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This pork is tough! (video)


[From]

Science Communicators of North Carolina social tonight

Science Communicators of North Carolina:

Connect with SCONC in a cool Co-Working Environment!
Monday, November 24 at 6:30 p.m.
Join your fellow SCONC members for a casual evening in Carrboro on Nov. 24. Headlining this month’s meeting — remotely — will be SCONC’s ambassador to Norway. Tour the area’s first co-working venture (and a great place for freelance folks!) – Carrboro Creative Co-working. Details: www.carrborocoworking.com

Thomas Jefferson’s handwriting

Can be yours:
jefferson%20handwriting.GIF
[Excerpt from here]

The Birthday of the Origin

349px-origin_of_species_title_page.jpgThe Origin originated on this day exactly 150-minus-1 years ago.

Future of Journalism?

Jeff Jarvis systematically lays down the possible future of journalism (read carefully the entire thing):

It’s fair to expect me to put forward scenarios for the future of news. In a sense, that’s all I ever do here, but there’s no one permalink summarizing my apparently endless prognostication. So here is a snapshot of – a strawman for – where I think particularly local news might go. What follows is just a long – I’m sorry – summary of what I’ve written here over time and an extension of the one model I think we need to expand coming out of the conference, where one lesson I took away is that news – on both the content and business side – will no longer be controlled by a single company but will be collaborative.

And if you are a recently laid-off journalist, call Anil Dash and he’ll help you become a New Journalist:

The TypePad Journalist Bailout Program offers recently terminated bloggers and journalists a free pro account (worth $150 annually) on the company’s popular blogging platform. In addition to the free yearly membership, the 20 to 30 journalists who are accepted will receive professional tech support, placement on the company’s blog aggregation site, Blogs.com, and automatic enrollment in the company’s advertising revenue-sharing program.

My picks from ScienceDaily

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Today’s carnivals

Carnival of Space #80 is up on Starts With A Bang!
Carnivalesque 45 – a blog carnival of Ancient and Medieval findings – is up on The Cranky Professor
Friday Ark #218 is up on Modulator

Clock Quotes

I had been practicing for the Depression a long time. I wasn’t involved with loss. I didn’t have money to lose, but in common with millions I did dislike hunger and cold.
– John Steinbeck

Obama’s Transition

As you all know, I was not an Obamamaniac. I never thought that he was a super-Progressive. But I am liking what I am seeing right now.
A lot of Progressive bloggers are screaming bloody murder how Obama has abandoned them by not appointing the Progressives to various cabinet posts. Hello? He’s Obama, not Kucinich. But anyway, what Progressives can he appoint – give me names?
What I remember most from reading The True Believer many years ago was not that revolutions are bad, but the take-home message that a revolution has different ‘types’ of people and that most people are not temperamentally suited to perform more than one role in a revolution.
There are leaders of the revolution: charismatic figures with oratory gifts. There are intellectuals who provide the ideology and the platform for the revolution. And then there are diplomatic types, the quiet bureaucrats who actually know how to govern once the revolution wins. The trouble with most revolutions in history is that the charismatic leaders became installed as new rulers, while not being temperamentally suited for that role.
Yes, I think the 2008 election was a revolution of sorts. But not a revolution that many Progressives were thinking it was. It was a replacement of “we-make-reality” rule with a reality-based governance. It is also a replacement of us.vs.them mindset with a kind of a post-partisan mindset.
Obama is not the most charismatic or the best orator that Dems could have found. But he is good enough to have inspired so many – enough to win. He is not the super-intellectual to write his own book on ideology, but he is good enough to recognize good ideas when he sees them, to be thoughtful and deliberate about them, and to project intellect. This gives us confidence and is another reason why many of us supported him and voted for him.
But his greatest strength is the “third type” that Hoffer describes – the technocrat/diplomat who knows how to get people to work for him instead of against him, a competent guy who will know how to govern.
So, his early picks for various positions are brilliant. Why?
What Obama needs is to pass tons and tons of legislation very fast in order to rescue the economy, roll back all the idiotic things Republicans did over the past 28 (and especially past 8) years, and get it all working soon enough for the average citizens to notice improvements in their own lives so he and other Dems can get re-elected in four years (and then use the second 4 years to do more, including perhaps some stuff that Progressives will really like).
In order to pass so many pieces of legislation, some of it quite extraordinary (the big upheaval of the health care industry, for instance), he needs to have the least possible opposition. He needs to have no opposition from his own party, weak opposition from the remnants of the GOP on the Hill, and the opposition by the media limited to the Limbaughs&Co. laughed at by everyone somewhere out in the desert.
So, he is keeping his friends close, and his enemies closer. Building the broadest possible coalition.
Emanuel Rahm. For a guy that some folks think is a Moslem – not that there is anything wrong with that – to pick an Israeli for Chief of Stuff is brilliant. Completely eliminates any criticism that Obama might be anything less than strongly pro-Israel, which is important for some Americans very much. Yet, Rahm is no gung-ho Likudnik at all – if anything, he can have a strong and authoritative voice in telling Israel what to do and what not to dare do.
Rahm is also known as a master arm-twister and a brilliant executor in Congress. People on both sides of the aisle like him and respect him. If you forget to pay on time, Rahm will break your knee-caps. If you were Obama, would you rather have this guy working for you in making sure your proposals become law, or would you rather have him outside your circle, plotting opposition to some of your ideas and perhaps running for President against you in four years? Of course you adopt him.
Joe Lieberman. With Begich beating Stevens, likely Franken beating Coleman and perhaps even Martin ousting Chambliss, Obama is tantalizingly close to having a veto-proof Senate. He needs Lieberman. Is it better to have him on your side, or working for the enemy?
With his highly public “pardon”, Obama got Joe by the balls. Joementum knows how to do one thing and one thing only – do what is good for himself. The only way he can politically survive is if he becomes the loudest Obama’s lapdog and yapdog ever, pushing harder than anyone for every little piece of Obama’s proposals. Obama’s got Joe’s vote on every bill, or else…an easy win by the Obama-picked primary opponent in 4 years.
Hillary Clinton. I voted for Obama in the primaries not because I liked him better, but because I did not want the old Clintonite foreign policy folks in power. I did not want to see the likes of Christopher, Albright, Cohen or Clark deciding foreign policy. But as Sec of State, Hillary pushes Obama’s foreign policy, not her own. Whose foreign policy was enacted last time around – Bush’s or Powell’s? She is well known and respected both in Washington and around the world and her hubby can lend a hand when needed.
Would you rather have a powerhouse like Clinton and her folks working for you or being kept outside your circle plotting revenge? And at the time when there is no appetite for wars at home, and when the cost of war is draining an economy that is already in the hole, there is nothing a hawk can do – there will be no way they can foment another war any time soon. But their hawkish reputation can be useful in negotiations with various shady types around the world.
All sorts of other people from the old Clinton White House. Note that most of the people Obama is picking were youngsters when Bill was President. They, unlike any of the new Progressive revolutionaries, have actually knowledge and experience in government, know how to get things done, and can hit the ground running. But most importantly, they are an extremely frustrated bunch – they were wide-eyed liberals back in the 90s and they could not get any of their ideas turned into law. Gingrich blocked them. Clinton himself gave in to Gingrich on a lot of fronts. These guys, wiser and older now, want revenge and more than anything want the opportunity to actually do what they always wanted to do. But this time, they have a Democratic congress to work with and no triangulating semi-conservative President to obey.
The new Progressives will probably get positions a little lower – training for the future. They have ideas, but no experience enacting them into policy and law. They are the future, but it would be a mistake to immediately give them power – they just don’t know how to deal with the Congress yet as they have never done it. Suggesting folks like Michael Pollan is irresponsible – he can be an advisor somewhere down the line, but his past advocacy does not make him fit for actual governing and Washington-navigation.
Reality-based Republicans. The Scowcroft protegees. Gates.. Yes, these folks exist. If Obama co-opts them, many other Republicans (both voters and congressmen) will gladly go along with Obama’s policies. This leaves only the nutters to run the GOP and nutters in Congress in opposition making fools of themselves by voting against popular legislation (and risking losing their seats in subsequent elections).
This makes the GOP irrelevant. Stuff gets done because it is deemed to be the best solution for the problem, not due to ideology. And all true conservative ideas have been tried and demonstrated to be wrong over the past 28 years – in economics, health care, foreign policy, everything (which is why McCain could not utter a word about any policy – he knew that was a loser as the GOP ideas are now all dead).
So, by coopting potential opponents, neutralizing congressional GOP, and neutering or defanging the media critics, Obama will have the opportunity to get stuff done. Quietly, with no drama.
Where his opposition will come, both from the Left and the Right, will not be from other political parties so much as from individual citizens who get engaged. And that mindset will take some time to kick in. My kids are post-partisan and non-ideological, looking for rational solutions for problems. I like to think of myself that way, but I know I am not – I am partisan and I actually enjoy the us.vs.them battles. I need to learn to bite my tongue and see the Big Picture. Many of us will have to learn that….

Public Intellectuals R Us – Discuss….

Daniel Drezner: Public Intellectual 2.0:

“…..The pessimism about public intellectuals is reflected in attitudes about how the rise of the Internet in general, and blogs in particular, affects intellectual output. Alan Wolfe claims that “the way we argue now has been shaped by cable news and Weblogs; it’s all ‘gotcha’ commentary and attributions of bad faith. No emotion can be too angry and no exaggeration too incredible.” David Frum complains that “the blogosphere takes on the scale and reality of an alternative world whose controversies and feuds are … absorbing.” David Brooks laments, “People in the 1950s used to earnestly debate the role of the intellectual in modern politics. But the Lionel Trilling authority figure has been displaced by the mass class of blog-writing culture producers.”
But these critics fail to recognize how the growth of blogs and other forms of online writing has partially reversed a trend that many cultural critics have decried — what Russell Jacoby called the “professionalization and academization” of public intellectuals. In fact, the growth of the blogosphere breaks down — or at least erodes — the barriers erected by a professionalized academy.
Most of the obituaries for the public intellectual suffer from the cognitive bias and conceptual fuzziness that come from comparing the annals of history to the present day……
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….The proliferation of blogs reverses those trends in several ways. Blogs have facilitated the rise of a new class of nonacademic intellectuals. Writing a successful blog has provided a launching pad for aspiring writers to obtain jobs from general-interest magazines. The premier general-interest magazines and journals in the country either sponsor individual bloggers or have developed their own in-house blogs.
For academics aspiring to be public intellectuals, blogs allow networks to develop that cross the disciplinary and hierarchical strictures of academe. Provided one can write jargon-free prose, a blog can attract readers from all walks of life — including, most importantly, people beyond the ivory tower. (The distribution of traffic and links in the blogosphere is highly skewed, and academics and magazine writers make up a fair number of the most popular bloggers.) Indeed, because of the informal and accessible nature of the blog format, citizens will tend to view academic bloggers that they encounter online as more accessible than would be the case in a face-to-face interaction, increasing the likelihood of a fruitful exchange of views about culture, criticism, and politics with individuals whom academics might not otherwise meet. Furthermore, as a longtime blogger, I can attest that such interactions permit one to play with ideas in a way that is ill suited for more-academic publishing venues. A blog functions like an intellectual fishing net, catching and preserving the embryonic ideas that merit further time and effort.
Perhaps the most-useful function of bloggers, however, is when they engage in the quality control of other public intellectuals. Posner believes that public intellectuals are in decline because there is no market discipline for poor quality. Even if public intellectuals royally screw up, he argues, the mass public is sufficiently uninterested and disengaged for it not to matter. Bloggers are changing that dynamic, however. If Michael Ignatieff, Paul Krugman, or William Kristol pen substandard essays, blogs have and will provide a wide spectrum of critical feedback…..”

Robert Cottrell: Isaiah, chapter 100:

…….The term “public intellectual” gained currency 20 years ago, describing a writer or academic who commanded public notice, especially when accepted as an authority in many fields. There was nothing new about such “brand-extension” in the humanities. Like Plato, Goethe or Berlin, writers and philosophers had long drifted in and out of public view, holding forth on life in general. But when nuclear weapons, environmentalism and genetics began to perturb Western public opinion in the 1960s, so more scientists followed Albert Einstein out of the academy and into the public arena. Richard Feynman, James Watson and Jacob Bronowski produced bestselling books without diluting their reputations. Freeman Dyson and Steven Weinberg wrote regularly for the New York Review of Books. Noam Chomsky’s left-wing politics eclipsed his scholarly work in linguistics……….
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……But the rise of blogs has greatly enlarged and confused the market. A disparager would say that anybody can be a blogger, and anything can be a blog: is this not proof of low standards? And yet, top bloggers include academics and commentators whose work would qualify them as public intellectuals by any traditional measure–for example, Tyler Cowen, Daniel Drezner, James Fallows, Steven Levitt, Lawrence Lessig and Andrew Sullivan. Indeed, it seems fair to say that if you have the quick wit and the pithy turn of phrase traditionally needed to succeed as a public intellectual, then you are one of nature’s bloggers. If you cannot quite imagine Berlin posting to Twitter, then think how well he would put, say, Hannah Arendt in her place, on bloggingheads.tv……
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….Whatever their provenance, the public intellectuals of 2009 will want to be fluent in the obvious issues of the moment: environment and energy, market turmoil, China, Russia, Islam. On that basis it looks like another good year for established stars such as Thomas Friedman, Martin Wolf, Bjorn Lomborg and Minxin Pei. But a rising generation of bloggers is terrifyingly young and bright: expect to hear more from Ezra Klein, Megan McArdle, Will Wilkinson and Matthew Yglesias.

Daniel Drezner: Trapped in a recursive loop on public intellectuals:

Of course, the really funny thing about this is that Klein, McArdle, Wilkinson and Yglesias all dwarf my traffic flows.

My picks from ScienceDaily

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Advice for potential graduate students

I wish every single laboratory web-page contained a disclaimer like this one:

We currently have room in the lab for more graduate students. Before you apply to this lab or any other, there are a few things to keep in mind. First, be realistic about graduate school. Graduate school in biology is not a sure path to success. Many students assume that they will eventually get a job just like their advisor’s. However, the average professor at a research university has three students at a time for about 5 years each. So, over a career of 30 years, this professor has about 18 students. Since the total number of positions has been pretty constant, these 18 people are competing for one spot. So go to grad school assuming that you might not end up at a research university, but instead a teaching college, or a government or industry job. All of these are great jobs, but it’s important to think of all this before you go to school.
Second, choose your advisor wisely. Not only does this person potentially have total control over your graduate career for five or more years, but he/she will also be writing recommendation letters for you for another 5-10 years after that. Also, your advisor will shadow you for the rest of your life. People will always think of you as so-and-so’s student and assume that you two are somewhat alike. Finally, in many ways you will turn into your advisor. Advisors teach very little, but instead provide a role model. Consciously and unconsciously, you will imitate your advisor. You may find this hard to believe now, but fifteen years from now, when you find yourself lining up the tools in your lab cabinets just like your advisor did, you’ll see. My student Alison once said that choosing an advisor is like choosing a spouse after one date. Find out all you can on this date.
Finally, have your fun now. Five years is a long time when you are 23 years old. By the end of graduate school, you will be older, slower, and possibly married and/or a parent. So if you always wanted to walk across Nepal, do it now. Also, do not go to a high-powered lab that you hate assuming that this will promise you long-term happiness. Deferred gratification has its limits. Do something that you have passion for, work in a lab you like, in a place you like, before life starts throwing its many curve balls. Your career will mostly take care of itself, but you can’t get your youth back.
If, after reading this, you want to apply to this lab, we would love to hear from you.

Hmmmmm, Nepal sounds good…..

Art of Star Wars

Start here, then keep clicking on the ‘plus’ sign on the right to see everything. Interesting…

Now we know where Lorax is lurking

Macedonians plant six million trees in single day:

Thousands of Macedonians took to the hills and forests on Wednesday to plant six million trees in a single day as part of a mass reforestation drive in the Balkan country.
The main aim of the campaign was to replant Macedonia’s forests after extensive wild fires over the past two summers, and organizers trumpeted the scheme’s environmental benefits at a time of global warming.
“Our goal is to make Macedonia “greener” and make people more aware of the needs of this planet,” said Macedonian opera singer Boris Trajanov, who initiated the project.
Thousands of people were bused to the planting sites, including more than 1,000 soldiers who planted some 200,000 seedlings at 14 sites.
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“If Macedonia, a country of two million people, can plant six million trees, we can only imagine how many trees can be planted in other, bigger countries,” he said.

Are more US students looking at studying in Canada?

This article made me think about this – it showcases two local examples, and it contains this statement:

Mary Gratch, the academic counselor for the junior and senior classes at CHS [Carrboro High School], was a counselor at Chapel Hill High School for 16 years before CHS opened. She said that about two of her students apply to Canadian universities every year.
“It’s a small number, but it kind of consistently happens,” she said. “In terms of people selecting schools, it’s the United States or Canada typically.”

But I am wondering if there are any trends occurring – do more (or less) students consider studying in Canada now than, let’s say, five or ten years ago?

Bruce Lee plays ping-pong (video)

With nunchacks, of course:

Darwin’s Legacy: Evolution’s Impact on Science and Culture

This is in March and close enough – Wilmington, NC – for me to go:

UNCW’s Evolution Learning Community will be hosting “Darwin’s Legacy: Evolution’s Impact on Science and Culture,” a multidisciplinary student conference on March 19-21, 2009.
The conference will be a unique opportunity for undergraduate and graduate students in the natural sciences, social sciences, humanities and arts who are conducting research or creative endeavors related to evolution to present their research, investigate graduate study opportunities, network, enhance their resumes, and enrich the body of knowledge surrounding evolution.

Blogger meet-up, anyone?

Cool photo manipulations

lobster2.jpg
From here:

Platinum is a Brazilian image manipulation studio which uses combination of photography, illustration, 3D and CGI to “make the impossible become reality”.

My picks from ScienceDaily

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Clock Quotes

Only within the moment of time represented by the present century has one species – man – acquired significant power to alter the nature of his world.
– Rachel Carson

Finally succumbed….

….to Twitter

Carrboro Creative Coworking Opening Party

This is where I was last night…. it was great fun, lots of people, lots of enthusiasm. Congratulations to Brian for pulling it off!

Dreamy Belgrade…

From, via…..

How rumors spread….

NYTimes:

Eliminating daylight time would thus accord with President-elect Barack Obama’s stated goals of conserving resources, saving money, promoting energy security and reducing climate change.

Eugene Sandhu:

In order to conserve energy, President-elect Barak Obama should eliminate daylight saving time.

Boing Boing:

President-elect Obama wants to get rid of daylight saving time in the United States to conserve energy.

The game of broken telephones? Or lack of reading comprehension, or just wishful thinking? I though we were the Reality-Based Community.
More….

The Ayers interview

Last week, Terry Gross interviewed William Ayers on Fresh Air on NPR – you can listen to the podcast here.
James Fallows and Dave Winer have completely opposite reactions to the interview. What do you think?

The Open Laboratory 2008 – in the final of all final stretches!

We are in the final strecth! The submissions have been trickling in all year, and a little bit more frequently recently, and many more over the past couple of weeks, so, if you have not done it yet, it is high time now to dig through your Archives for your best posts since December 20th 2007 and submit them. Submit one, or two, or several – no problem. Or ask your readers to submit for you.
Only submissions received through this form are valid.
Then take a look at your favourite bloggers and pick some of their best posts – don’t worry, we can deal with duplicate entries. Do not forget new and up-coming blogs – they may not know about the anthology – and submit their stuff as well.
As we did last year, we encourage you to also send in original poems and cartoons.
Keep in mind that the posts will be printed in a book! A post that relies heavily on links, long quotes, copyrighted pictures, movies, etc., will not translate well into print.
The deadline is December 1st, 2008. – just two weeks to go!
Below are submissions so far. Check them out and get inspired. If you see that one of your posts is at an old URL and you have since moved, re-submit with the new URL (perhaps re-post it if necessary).
Posting URLs in the comments does not work. Go down to the bottom of this post (or to the sidebar of this blog) and click on the “Submit to OpenLab2008” button. Or click here.

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Endless time….

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viaviaviaviavia, originally from here.

Clock Quotes

There is nothing you can say in answer to a compliment. I have been complimented myself a great many times, and they always embarrass me – I always feel that they have not said enough.
– Mark Twain

Virtual journey with Darwin

Check out the new NHM’s interactive Voyage of the Beagle:
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[Hat-tip, of course, to Karen]

My picks from ScienceDaily

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Clock Quotes

While theoretically and technically television may be feasible, commercially and financially I consider it an impossibility, a development of which we need waste little time dreaming.
– Lee De Forest

New and Exciting in PLoS this week

So, let’s see what’s new in PLoS Genetics, PLoS Computational Biology, PLoS Pathogens, PLoS ONE and PLoS Neglected Tropical Diseases this week. As always, you should rate the articles, post notes and comments and send trackbacks when you blog about the papers. Here are my own picks for the week – you go and look for your own favourites:

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Good Bye, Yugo

The last of the old Yugo cars rolled off the production line today.

Here is some history of it. Yugo cars, known abroad, never came even close to Zastava 750 for its emotional meaning for Yugoslavs. Hey, I learned to drive in one of those:

Nature + good photographer = Art

This image came from the website of Eshel Ben-Jacob a Professor of Physics and artist. You can see more fascinating science-related images on the Seed Portfolio page – there are bacterial colonies growing into strange shapes, amazing flight patterns of birds, close-ups of hairy insects, etc, well worth your time.
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It happens, sometimes….

Politicians persuaded to save Canada boreal forest:

Politicians actually listened when experts told them to protect Canada’s boreal forest, a potent weapon against global warming, and the plan for this vast green area could work on some of the world’s other vital places, scientists told Reuters.
—————
Jeremy Kerr, a biogeographer at the University of Ottawa, said he and other scientists were surprised and delighted that Canadian politicians have been persuaded by science.

More info…

‘….the potential future of an open, transparent peer review process. …’

Garrett Lisi’s Exceptional Approach to Everything:

When Lisi published his physics paper, “An Exceptionally Simple Theory of Everything,” to an online archive last year, it created a media buzz about his lifestyle and an onslaught of support and skepticism about his model. Although the verdict is still out on whether Lisi’s theory will prove predicatively accurate, the means by which he released and vetted his research point to a larger trend in the scientific community.
Barriers to data are falling, a cross-disciplinary community of commenters is replacing journal-selected peer reviewers, and “information to the people!” is becoming the raison d’être of the science information superhighway. The movement, combined with an evolving image of the contemporary scientist, is redefining how society interacts with science.
—————-snip—————-
Why did you choose not to submit your paper to a traditional peer-reviewed journal?
I think peer review is important, but the journal-operated system is severely broken. I suspected this paper would get some attention, and I chose not to support any academic journal by submitting it. Under the current system, authors (who aren’t paid) give ownership of their papers to journals that have reviewers (who aren’t paid) approve them before publishing the papers and charging exorbitant fees to view them. These reviewers don’t always do a great job, and the journals aren’t providing much value in exchange for their fees. This old system persists because academic career advancement often depends on which journals scientists can get their papers into, and it comes at a high cost – in money, time, and stress. I think a better peer-review system could evolve from reviewers with good reputations picking the papers they find interesting out of an open pool, such as the physics arXiv, and commenting on them. This is essentially what happened with my paper, which received a lot of attention from physics bloggers – it’s been an example of open, collaborative peer review.
What is the alternative to the way problems in physics are typically approached?
I don’t think there is a typical way physics is being done; there’s a great deal of variation. But there does seem to be more pressure on young researchers than there should be, especially on post-docs and new professors. Science shouldn’t be a grind to publish more papers and advance a career – we’re supposed to be doing this because we love it and find it fascinating. High-quality work and interesting projects should be valued, not just a lengthy publication record. And since science helps society, I think society should be better to scientists and support them in doing the research they want, rather than requiring them to jump through so many hoops.
—————–snip——————–
How will “open science” and other new ways of sharing information transform science?
I think we’re in the midst of a gradual revolution, following the rise of the Internet. The success of the physics arXiv – where physicists post freely available versions of their papers – has made it possible for anyone to access the literature from anywhere. This let me move to Maui 10 years ago and stay in touch with the field. Now an NIH mandate, requiring that publicly funded papers be posted to PubMed, will produce the same liberating effect in other fields. The net is also affecting the way scientists work directly, with wikis and blogs used for discussions, collaborations, and individual note keeping. These new tools, along with online social networks, allow geographically independent researchers to keep in perpetual, productive contact. Since theoretical researchers are no longer anchored to one location, I’ve been working on creating Science Hostels – micro-institutes in beautiful places where scientists could live and work, while having a bit of fun, and keeping more of a balance in their lives.

Read the whole thing….

ScienceOnline’09 – important information for international participants

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Eva Amsen uncovered some important information for the international travelers into the USA: International travel info – Science Online ’09:

For those of you who are traveling to the Science Online ’09 conference from Europe, Australia, NZ, South Korea, Singapore, or on a passport from one of those parts of the world, this is of importance:
As of January 12 2009, travelers using the Visa Waiver Program to enter the US (that is when you don’t need to apply for a visa but you get one of those green forms to fill out at the border) will need to register online before their trip.
I had a look at the registration website and you need a ticket before you register. It says it takes 72 hours to process, but since the week of the conference is the first week that the system is mandatory, I would play it safe and get it done earlier. The questions are the exact same ones as normally appear on the green form so it will only take a minute or so to fill out.
Again, this only concerns you if your passport is from one of these countries.

Please check before you fly in, please.