ClockQuotes

As if you could kill time without injuring eternity.
– Henry David Thoreau

A Clock Around The Blog Around The Clock….

Perhaps you did not like the shirt. Or do not care for the mug. But if you qualify for one of the prizes by donating to a Scienceblogs challenge on DonorsChoose, you may get a much more appropriate piece – a wall clock:
ABATC%20clock.jpg

My Picks from ScienceDaily

Testosterone Turns Male Junco Birds Into Blustery Hunks — And Bad Dads:

The ability to ramp up testosterone production appears to drive male dark-eyed juncos to find and win mates, but it comes with an evolutionary cost. Big fluctuations in testosterone may also cause males to lose interest in parenting their own young, scientists have learned.

Blind To Beauty: How And Where Do We Process Attractiveness?:

Beauty may be in the eye of the beholder, but according to research conducted by a UBC medical student, eye candy fails to find a sweet tooth in patients with a rare disorder.

After Drought, Diversity Dries Up And Ponds All Look The Same:

An ecologist at Washington University in St. Louis has discovered that after ponds dry up through drought in a region, when they revive, the community of species in each pond tends to be very similar to one another, like so many suburban houses made of ticky tacky.

A Gene Divided Reveals The Details Of Natural Selection:

In a molecular tour de force, researchers at the University of Wisconsin-Madison have provided an exquisitely detailed picture of natural selection as it occurs at the genetic level.

New and Exciting from PLoS Biology and Medicine: Sleep in zebrafish, Open Access and Observational Studies

Monday – the day for checking in PLoS Biology and PLoS Medicine for the newest published articles. And there is some good stuff:
Characterization of Sleep in Zebrafish and Insomnia in Hypocretin Receptor Mutants

Sleep disorders are common and poorly understood. Further, how and why the brain generates sleep is the object of intense speculations. In this study, we demonstrate that a bony fish used for genetic studies sleeps and that a molecule, hypocretin, involved in causing narcolepsy, is conserved. In humans, narcolepsy is a sleep disorder associated with sleepiness, abnormal dreaming, and paralysis and insomnia. We generated a mutant fish in which the hypocretin system was disrupted. Intriguingly, this fish sleep mutant does not display sleepiness or paralysis but has a 30% reduction of its sleep time at night and a 60% decrease in sleep bout length compared with non-mutant fish. We also studied the relationships between the hypocretin system and other sleep regulatory brain systems in zebrafish and found differences in expression patterns in the brain that may explain the differences in behavior. Our study illustrates how a sleep regulatory system may have evolved across vertebrate phylogeny. Zebrafish, a powerful genetic model that has the advantage of transparency to study neuronal networks in vivo, can be used to study sleep.

Also check the accompanying synopsis: Let Sleeping Zebrafish Lie: A New Model for Sleep Studies:

Although the function of sleep is hotly debated, one thing is clear–we, and most other animals, cannot do without it. In a new study, Yokogawa et al. describe how zebrafish sleep, finding both striking similarities to mammalian sleep and its regulation and intriguing differences.

Also, on the 4th birthday of PLoS Biology, a good editorial: When Is Open Access Not Open Access?

Since 2003, when PLoS Biology was launched, there has been a spectacular growth in “open-access” journals. The Directory of Open Access Journals (http://www.doaj.org/), hosted by Lund University Libraries, lists 2,816 open-access journals as this article goes to press (and probably more by the time you read this). Authors also have various “open-access” options within existing subscription journals offered by traditional publishers (e.g., Blackwell, Springer, Oxford University Press, and many others). In return for a fee to the publisher, an author’s individual article is made freely available and (sometimes) deposited in PubMed Central (PMC). But, as open access grows in prominence, so too has confusion about what open access means, particularly with regard to unrestricted use of content–which true open access allows. This confusion is being promulgated by journal publishers at the expense of authors and funding agencies wanting to support open access.

And check these two important articles on observatinal studies in epidemiology:
The Strengthening the Reporting of Observational Studies in Epidemiology (STROBE) Statement: Guidelines for Reporting Observational Studies
Strengthening the Reporting of Observational Studies in Epidemiology (STROBE): Explanation and Elaboration

Today’s Carnivals

Oekologie #10 is up on Laelaps.
Boneyard #7 is up on Microecos
Mendel’s Garden: Halloween Edition is up on Discovering Biology in a Digital World
The Accretionary Wedge #2 is up on All of My Faults Are Stress Related
Four Stone Hearth XXV – 1st Anniversary Edition – is up on Remote Central
Grand Rounds Vol 4:4 are up on NY Emergency Medicine
Carnival Of The Green #99 is up on Ethical Junction

Nothing beats the Hands-On experience!

Just watching someone give a talk is often not enough to remember it later. As they say, a picture is worth a thousand words. And certainly, seeing is believing. But, this presentation is impossible to forget, even if one would rather not remember it so vividly. Oh, and it was absolutely NSFW!
Obligatory Reading of the Day.

Science Blogging in Second Life

Yes, I’ll try to be there in about an hour, if the system stops freezing on me, or if I do not get delayed by copulating with a furry kangaroo or something…
Bertalan is live-blogging the event!

How Global Warming Disrupts Biological Communities – a Chronobiological Perspective

Clocks, Migration and the Effects of Global WarmingSince today is the Blog Action Day and I am swamped at work, I decided to republish one of my old posts concerning the environment (under the fold).

Continue reading

Science Blogging Conference – who is coming? (Local Bloggers 1)

2008NCSBClogo200.pngThere are 96 days until the Science Blogging Conference. The wiki is looking good, the Program is shaping up nicely, and there is more and more blog and media coverage already. There are already 89 registered participants and if you do not register soon, it may be too late once you decide to do so (we’ll cap at about 230). Between now and the conference, I am highlighting some of the people who will be there, for you to meet in person if you register in time.
Ivory-Bill.jpgRob Gluck covers a very narrow niche – only the news and views about the Ivory-Billed Woodpacker.

seaturtle.jpgOlive Ridley covers the environment, India, and turtles.

In order to meet them, you know what you have to do: register! Registration is free. Check the map for nearby hotels. And sign up for the Friday dinner.

ClockQuotes

In olden times sacrifices were made at the altar, a custom which is still continued.
– Helen Rowland

A Global Slant On Nobel Prizes

So far this week, my blogging had a distinctly local slant on Nobel Prizes, so now I want to do something different. Quite a lot of people have noticed how many science prizes this year went to Europeans. Read the excellent treatments by Katherine Sharpe, Abel Pharmboy, Steinn Sigurosson, Chad Orzel and PZ Myers to see the range of ideas and opinions on this.
I want to add just a couple of brief points…
If you look at the list of winners of Nobels for Literature, you will notice that they come from all over the world.
If you look at the Peace Prizes, they are also from all over, though U.S. recepients are quite frequent probably due to the fact that the US, as a country with a huge military which it is quite willing to use, is in the position to affect where and when the wars start and where and when they end. Often those decisions are disastrous, but sometimes they are a force for good and the US leaders behind those decisions deserve the prize.
The science prizes are mainly going to Americans and Europeans. This, in my mind, is not due to inherent superiority of scientists in these places, but due to difficulties facing scientists elsewhere. Especially for disciplines awarded by the Nobel committee – physics, chemistry, biomedical research – there is a necessity for quite a lot of space, money, infrastructure, equipment, state support, national science tradition, institutional memory, network of qualified collaborators and access to literature, none of which is readily available to scientists in developing countries. If the prizes were awarded for mathematics, non-medical areas of biology or archeology, for instance, I bet there would be many more recipients from other places, as at least some areas of such research can be done by individuals with minimal need for support, infrastructure and funds.
Let’s start with literature. If your library cannot afford subscriptions to any journals, as just subscription to Science and Nature exceeds entire annual operating budget, your research will be based on 40-year old hand-me-down textbooks, not on last week’s cutting-edge papers, thus your research is outdated and perhaps flawed even before you start doing it! Forget Nobel – you are doomed to mediocrity no matter how brilliant you may be. You know my solution to this problem: Open Access.
There are about 180 countries in the world (depends who is counting).
There are three science prizes every year, with potentially a total of nine recepients.
In an ideal world, each country would expect, on average (180/9 = 20) to have a science Nobel laureate once every 20 years. This would not mean that US science has gone down the drain, but that science has really became global as it should be. I can’t wait for this to happen.

How To Cite a Blog Post Properly in your List of References

A couple of years ago, a blog post of mine appeared in the List of References of a paper. Unfortunately, the form in which it was cited was this:
#16 Zivkovic B. Clock tutorial #6: To entrain or not to entrain, that is the question. (2005); Available at: http://circadiana.blogspot.com.
As you can see, it is far from specific. The actual URL of the post is http://circadiana.blogspot.com/2005/02/clock-tutorial-6-to-entrain-or-not-to.html. When I reposted it here I added on the bottom what I thought would be the Proper Reference to this post:
Zivkovic, BD (2005/2006) Clock Tutorial #6: To Entrain Or Not To Entrain, That Is The Question. A Blog Around The Clock, http://scienceblogs.com/clock/2006/08/clock_tutorial_6_to_entrain_or.php
I even contacted the authors about this, but nothing was done to fix it.
As that post was for a long time the only example of a cited blog-post, it was kinda OK (except for me alone). But now that the practice is spreading, some uniformity is neccessary and authors/editors need to be informed about it. Now, The NLM Style Guide for Authors, Editors, and Publishers has added the official rules for citing blog posts (via Medgadget):
Sample Citation and Introduction to Citing Blogs
Citation Rules with Examples for Blogs
Examples of Citations to Blogs
Bookmark those and remember to use them!
Update: Now that I took a second look and removed my perceptual blind-spots, prompted by a commenter, I see that they are actully not including correct permalinks in their references. I will contact them and you should, too.

No drafts on tap due to the draught?

The last time we met at the Tar Heel Tavern was on April 2nd. After that, the inspiration dried out and no Tarheel-brewed amber-colored liquid was flowing for months. With the grass wilting everywhere around us, it was easy to just give up and stop watering one’s blogging flowers with creative juices which were in such short supply. Even slippery slopes are not slippery when not wet. And thirst for knowledge is hard to sustain in the presence of real thirst. But, a long series of bad, bad puns aside, it is time to re-start the carnival, open up the taps and let it all flow! In two weeks, the 111st edition of the Tar Heel Tavern will convene at Mistersugar and, you probably guessed by now, the theme is the Drought!

Write an entry about water, rain, lakes, water conservation, drought, North Carolina development policy or other related topic, post it to your own blog, and send a message with your entry’s permalink to zuiker+TTHT@gmail.com by 6pm on Friday, October 26, 2007.

If you need help with inspiration, pick up the newest issue of Natural History Magazine which is full of articles about Water written from many different angles: from physics to biology to policy. You have two weeks. And if you write it tomorrow, your post can serve a double-duty as your Blog Action Day contribution.
Oh, and let’s see if we can get Tar Heel Tavern back into a regular schedule, so let us know if you want to host future editions.

Blog Action Day – Environment

Tomorrow, Monday, October 15th, many blogs (14,081 at this moment) will participate in the Environment-themed Blog Action Day.

On October 15th, bloggers around the web will unite to put a single important issue on everyone’s mind – the environment. Every blogger will post about the environment in their own way and relating to their own topic. Our aim is to get everyone talking towards a better future.
Blog Action Day is about MASS participation. That means we need you! Here are 3 ways to participate:
* Post on your blog relating to the environment on Blog Action Day
* Donate your day’s earnings to an environmental charity
* Promote Blog Action Day around the web

Will you?
Bloggers Unite - Blog Action Day

Barbeque Journalism

Jeffrey Feldman nails it:

Every journalist working in America should print out that passage in extra-large font and tape it next to the bathroom mirror. Better yet, they should put the passage on a chain and wear it around their necks.

Obligatory Reading of the Day!

My Picks from ScienceDaily

Humans Perceive Others’ Fear Faster Than Other Emotions:

You may not be fully dressed without a smile, but a look of horror will make a faster first impression. Vanderbilt University researchers have discovered that the brain becomes aware of fearful faces more quickly than those showing other emotions.

Pasturing Cows Convert Soil To A Source Of Methane, Potent Greenhouse Gas:

The cow as a killer of the climate: This inglorious role of our four-legged friends, peaceful in itself, is well-enough recognised, because, with their digestion, the animals produce methane, which is expelled continuously. Now, however, a team of German scientists from the Institute of Soil Ecology of the GSF – National Research Center for Environment and Health (Helmholtz Association of German Research Centres) and Czech colleagues at the Budweis Academy of Science have been able to show that bovine animals can also boost the production of this climate gas in soil.

Portable Diagnostic System For Foot-and-mouth Disease And Avian Flu Designed:

Smiths Detection is to launch a portable detection system that will enable veterinarians to carry out on-site diagnosis of animal diseases such as foot-and-mouth and avian flu. This new technology means vets will be able to diagnose diseases in livestock and birds in the field in less than 90 minutes rather than having to send samples for laboratory analysis.

Red Wine And Grape Juice Help Defend Against Food-borne Diseases, Study Suggests:

Red wine is known to have multiple health benefits. Researchers at the University of Missouri-Columbia have found that red wine may also protect humans from common food-borne diseases.

Want Antioxidants? Have You Eaten Micro-algae Lately?:

Some consumers want more than just their traditional nourishment requirements met. Micro-algae (eaten by humans in pre-Columbian America) are more than just nutritive. Spirulina microalgae could be a good source of antioxidants due to the presence of carotenoids deriving from chlorophyll, and provide bacterial growth inhibiting action because of certain fatty acids. Microalgae have turned out to be a potential alternative to the use of synthetic sources for these ingredients.

Buying And Selling Habitats To Help Wildlife:

Tradable permits are all the rage in environmental policy. They are already used internationally to reduce carbon emissions and improve air quality. A group of economists and ecologists from the UK, the Netherlands and Germany, are working together to find out whether such schemes could work for wildlife too. So far, it looks promising, but probably only for cultural landscapes like farmland.

Science Blogging Conference – who is coming? (Blogue Science-Presse)

2008NCSBClogo200.pngThere are 97 days until the Science Blogging Conference. The wiki is looking good, the Program is shaping up nicely, and there is more and more blog and media coverage already. There are already 89 registered participants and if you do not register soon, it may be too late once you decide to do so (we’ll cap at about 230). Between now and the conference, I am highlighting some of the people who will be there, for you to meet in person if you register in time.
Blogue%20Science-Presse%20banner.jpgPascal Lapointe and Josée Nadia Drouin work for Montreal-based Agence Science-Presse, where they are building a platform with a series of French-language science blogs, called Science! On Blogue, largely modeled after the super-successful Seed Scienceblogs.com, of course!
In order to meet them, you know what you have to do: register! Registration is free.

ClockQuotes

Life is short and we have never too much time for gladdening the hearts of those who are traveling the dark journey with us. Oh be swift to love, make haste to be kind.
– Henri-Frederic Amiel

Busted!

I started teaching my BIO101 Lab this morning again. But this was the first: two of the students said: “Hey Mr.Z, we looked around the Web and learned a lot about you – A Blog Around The Clock, The Magic School Bus and now we have all the dirt on you!”
It was bound to happen – and it was fun, actually, a good ice-breaker for the beginning of the new class. Perhaps they will post comments here (please do). And I also pointed them to my classroom blog, as they are also taking the lecture portion with another faculty member at the same time.

The Pharyngula mutating genre meme

I got tagged with this cool meme, demonstrating evolution in cyberspace:

There are a set of questions below that are all of the form, “The best [subgenre] in [genre] is…”. Copy the questions, and before answering them, you may modify them in a limited way, carrying out no more than two of these operations:
* You can leave them exactly as is.
* You can delete any one question.
* You can mutate either the genre, medium, or subgenre of any one question. For instance, you could change “The best time travel novel in SF/Fantasy is…” to “The best time travel novel in Westerns is…”, or “The best time travel movie in SF/Fantasy is…”, or “The best romance novel in SF/Fantasy is…”.
* You can add a completely new question of your choice to the end of the list, as long as it is still in the form “The best [subgenre] in [genre] is…”.
* You must have at least one question in your set, or you’ve gone extinct, and you must be able to answer it yourself, or you’re not viable.
Then answer your possibly mutant set of questions. Please do include a link back to the blog you got them from, to simplify tracing the ancestry, and include these instructions.
Finally, pass it along to any number of your fellow bloggers. Remember, though, your success as a Darwinian replicator is going to be measured by the propagation of your variants, which is going to be a function of both the interest your well-honed questions generate and the number of successful attempts at reproducing them.

My great-grandparent is Pharyngula.
My grandparent is Metamagician and the Hellfire Club.
My parent is Flying Trilobite
The best time travel novel in SF/Fantasy is:
To Say Nothing Of The Dog” by Connie Willis
The best scary movie in scientific dystopias is:
“Soylent Green”
The best sexy song in rock is:
“Fever” in many renditions.
The best cult novel in ex-Yugoslav fiction is:
Rabies by Borislav Pekic
Let not this lineage go extinct! I am asking the following to go forth and multiply:
Sheril
Kate
John
Danica
Anne-Marie
Eric
Sarah
Melissa
My children (so far):
Anne-Marie
Sheril
John
Kate
Melissa
Eric

Science Blogging Conference – who is coming? (SciBlings 2)

2008NCSBClogo200.pngThere are 98 days until the Science Blogging Conference. The wiki is looking good, the Program is shaping up nicely, and there is more and more blog and media coverage already. There are already 85 registered participants and if you do not register soon, it may be too late once you decide to do so (we’ll cap at about 230). Between now and the conference, I am highlighting some of the people who will be there, for you to meet in person if you register in time.
microphone07.gifA lot of SciBlings are planning to come this year, representing a wide range of interests and blogging styles, from the ecology of Jeremy Bruno, through neuroscience of Evil Monkey to evolutionary genetics of RPM. As is now a tradition when SciBlings meet, I expect them to sing karaoke at the end of the day….
In order to sing with them, you know what you have to do: register! Registration is free.

ClockQuotes

Wherever anything lives, there is, open somewhere, a register in which time is being inscribed.
– Henri Bergson

Jesus Loves You!

No comment:

Thanks, Rick, for this enlightening piece….

New and Exciting in PLoS Community Journals – Neanderthals

As always on Fridays, there are new articles published in PLoS Computational Biology, PLoS Genetics and PLoS Pathogens. Look around to see what’s new. My pick for this week:
Inconsistencies in Neanderthal Genomic DNA Sequences:

One of the enduring questions in human evolution is the relationship of fossil groups, such as Neanderthals, with people alive today. Were Neanderthals direct ancestors of contemporary humans or an evolutionary side branch that eventually died out? Two recent papers describing the sequencing of Neanderthal nuclear DNA from fossil bone held promise for finally answering this question. However, the two studies came to very different conclusions regarding the ancestral role of Neanderthals. In this paper, we reanalyzed the data from the two original studies. We found that the two studies are inconsistent with each other, which implies that the data from at least one of the studies is probably incorrect. The likely culprit is contamination with modern human DNA, which we believe compromised the findings of one of the original Neanderthal DNA studies.

My Picks from ScienceDaily

New Hearing Mechanism Discovered:

MIT researchers have discovered a hearing mechanism that fundamentally changes the current understanding of inner ear function. This new mechanism could help explain the ear’s remarkable ability to sense and discriminate sounds. Its discovery could eventually lead to improved systems for restoring hearing.

People Are Programmed To Love Chocolate, Study Finds:

For the first time, scientists have linked the all-too-human preference for a food — chocolate — to a specific, chemical signature that may be programmed into the metabolic system and is detectable by laboratory tests. The signature reads ‘chocolate lover’ in some people and indifference to the popular sweet in others, the researchers say.

Green Algae: The Nexus Of Plant-Animal Ancestry:

Genes of a tiny, single-celled green alga called Chlamydomonas reinhardtii may contain scores more data about the common ancestry of plants and animals than the richest paleontological dig. This work is described in an article in Science.

Frozen Sperm Worked For White Rhino:

Scientists from the Leibniz Institute for Zoo and Wildlife Research in Berlin successfully inseminated a rhino with formerly frozen sperm. This world-first artificial insemination of a white rhino with frozen rhino sperm took place in Budapest Zoo.

Spread Of Endogenous Retrovirus K Is Similar In The DNA Of Humans And Rhesus Monkeys:

According to paleontologic and molecular studies, the chimpanzee (Pan troglodytes) is the closer relative to the humans (Homo sapiens) and that both lineages had a common ancestor at 5 to 7 million years ago.

Benefits Of 80 Million Years Without Sex:

Scientists have discovered how a microscopic organism has benefited from nearly 80 million years without sex. Bdelloid rotifers are asexual organisms, meaning that they reproduce without males. Without sex, these animals lack many of the ways in which sexual animals adapt over generations to survive in their natural environment.

New on…science blogs

Jonathan Eisen, Rosie Redfield and Douglas Theobald destroy the especially egregious example of bad media reporting on the “function of appendix” paper.
Kate does not dance around the issue when discussing a study on the relationship between lapdancers’ earnings and where they are in their monthly cycles.
Anne-Marie went into the caves and spent the day sexing bats
Did T.rex give us a finger? Two? Three?
The neurology of Alice in Wonderland – so cool!
In praise of yeast.
The Economy of Prestige (see: Nobel Prizes).
Math, Science and Art: Fibonacci Numbers, the Cochlea, and Poetry.
What is cryptozoology?
How to eat a cephalopod.
The coolest interactive Periodic Table ever!
Al Gore’s so-called ‘errors’.

A Local Slant On Nobel Prizes, Again.

Smithies is not the only winner of this year’s Nobel Prize with a local connection.
The Nobel Prize for Peace was awarded this morning and one of the recepients is the Intergovernmental Panel on Climate Change (IPCC). The chair of IPCC is Dr. Rajendra Kumar Pachauri, a triple alumnus and former professor at my alma mater North Carolina State University:

Pachauri, chair of the Intergovernmental Panel on Climate Change (IPCC), obtained all three of his graduate degrees from NC State, including a master’s degree in industrial engineering in 1972, and doctorates in industrial engineering and economics. He also served at NC State as an assistant professor (August 1974 – May 1975) and visiting faculty member (summer 1976 and 1977) in the Department of Economics.

Oh, and unless you just woke up from The Long Sleep, you probably heard that the other recepient sharing the prize is some fella by the name of Al Gore. Ever heard of him? Apparently, he is the only person in history to get both a Nobel and an Oscar (is that true?). Next for him: an Olympic Gold medal and then he’ll have everything. Except Pulitzer, Emmy and winning the American Idol…oh, and the U.S.Presidency – darn, that’s the one he should have won some seven years ago.

Five-times-five – celebrate the 5th birthday of Creative Commons

Alma Swan and Lawrence Lessig remind us that Creative Commons is celebrating its 5th birthday this December.
Alma writes:

Creative Commons (CC) is celebrating its 5th birthday. Lawrence Lessig has written to all supporters describing its ‘dramatic’ growth during the last quinquennium and yet acknowledging that as CC works to strengthen the underpinnings of participatory culture ‘others are working equally hard to make sure culture remains proprietary’. Although this way of putting it is rather starkly black and white, and there remains a need for proper protection of creative rights in a number of circumstances, there is no doubt that CC has tapped into the new world view of many people, including creators of works of all kinds, that there is great worth (and satisfaction) in opening up and sharing what they produce, at a personal level as well as for humanity as a whole.
Lawrence asks that people help CC celebrate the past 5 years, and plant the seeds for the next five, by helping to grow the commons in 5 ways:
– use 5 CC-licensed works
– license 5 new works
– spread the word and send CC your story of why you support it
– introduce 5 new people to Creative Commons
– increase your previous gift to CC by 50% to help sustain its operations for 2008
The Calendar-for-Open-Access that I have just produced carries a Creative Commons BY-NC-SA licence (attribution-noncommercial-sharealike). I want as many people as possible to print it out and enjoy it next year. You can find it by following the link on our website.
There has been some demand for professionally printed copies, so I am about to place an order with the printer but I need to know the final numbers. If you would like one, I will mail it to you in a card envelope by airmail. Please let me know by email (aswan AT keyperspectives.co.uk) and I will tell you the final price. The cost will be about US$15, €11 or £7, and it could be less if the print run is big enough. These prices are selling at cost – I’ve built no profit into them – but I’ve rounded up to the nearest dollar/euro/pound for simplicity. The extra cents and pennies will be sent to Creative Commons along with my donation for 2008.

So, five times five! Let’s do it!
Support CC - 2007

DonorsChoose Update 3

The DonorsChoose fundraiser is in full swing here on Scienceblogs.com. As always, Janet’s blog is the Information Center for the drive, and you can also check Dave’s graphs as well.
As you know, Seed Media Group is matching $15,000 of your donations. The Scienceblogs.com Overlords have also announced some additional prizes!
* 21 “Seed Hearts Threadless” tee shirts
* 21 ScienceBlogs mugs
* 21 subscriptions to Seed magazine
* 9 copies of “The Best American Science Writing 2007”
These prizes will be divided into three thirds and each third will be given on one of the next three weeks for that week’s donors. In the end, all of the donors from the entire month will be eligible for the big prize:
* 1 fresh, new iPod nano
To be eligible for prizes, you need to donate to any of the scienceblogs challenges and turn in your receipts at: scienceblogs@gmail.com.
And if you donate through my challenge (currently 40% funded) and send me yoru receipts, you will be eligible for additional prizes, for instance this t-shirt sporting the beautiful banner of my blog:
ABATC%20T-shirt.jpg

The Blogging Scholarship – Vote For Shelley!

A few days ago, I told you about this year’s $10,000 scholarship for student bloggers. A few days later, the voting has been vigorous (and the competition somewhat heated!), and Shelley is currently in second place. You can help her get to the top by voting for her if you have not done so already. And certainly go and check out her wonderful blog!

Today’s Carnivals

The new edition of the Carnival of Space is up on Space For Commerce, by Brian Dunbar
Friday Ark #160 is up on Modulator

Science Blogging Conference – who is coming? (Nature Network Bloggers)

2008NCSBClogo200.pngThere are 98 days until the Science Blogging Conference. The wiki is looking good, the Program is shaping up nicely, and there is more and more blog and media coverage already. There are already 85 registered participants and if you do not register soon, it may be too late once you decide to do so (we’ll cap at about 230). Between now and the conference, I am highlighting some of the people who will be there, for you to meet in person if you register in time.
Anna%20K.jpg
Anna Kushnir is a science blogger on Nature Network. Apart from her science blog Lab Life, she also runs a food blog Sunday Night Dinner. We have first met at Scifoo (where this picture is from), and more recently here in Durham for the foodblogging event. She is organizing a Future of Scientific Publishing conference in Boston in a couple of weeks, so we’ll get to meet again!
Euan%20Edie.jpg
Euan Adie works at Nature in the web publishing department, designing all the neat Science 2.0 applications there, as well as blogging on Flags and Lollipops, Nascent and FnL. We have also met at Scifoo (as well as for a couple of minutes when he visited PLoS in July).
In order to meet them, you know what you have to do: register! Registration is free.

ClockQuotes

Love can sometimes be like magic. But magic can sometimes … just be an illusion.
– Javan

My Picks from ScienceDaily

Herding Aphids: How ‘Farmer’ Ants Keep Control Of Their Food:

Chemicals on ants’ feet tranquilise and subdue colonies of aphids, keeping them close-by as a ready source of food, says new research. The study throws new light on the complex relationship between ants and the colonies of aphids whose sugary secretions the ants eat.

Discovery Of Retinal Cell Type Ends 40-year Search:

A research team combining high-energy physicists from the University of California, Santa Cruz, and neuroscientists from the Salk Institute in La Jolla, Calif., has discovered a type of retinal cell that may help monkeys, apes, and humans see motion.

Ticks Don’t Come Out In The Wash:

Before venturing into tick-infested territory, you used a topical repellent on exposed skin and outer clothing. When you returned, you did a body check and threw your clothes in the wash. But clean clothes may not be tick-free clothes. When he found a live lone star tick (Amblyomma americanum) on the agitator of his washing machine, Agricultural Research Service (ARS) entomologist John Carroll decided to find out how tough ticks are. So he bagged up nymphs from two species–the lone star tick and the deer tick, (Ixodes scapularis), the creature that transmits Lyme disease–and put them in the washing machine.

In Biology, Polarization Is A Good Thing:

Using a molecular cellular compass, individual cells in complex organisms know which way is up or down, in epithelial cells known as apical-basal polarity. Determining the orientation is essential for an individual cell to perform it’s designated tasks. Now it appears that the same compass also defines the direction of cells when migrating by establishing a morphological back and a front.

Japanese Jews sing and dance!

What is this? A Tevye day on science blogs? Attila mentions him. Jason mentions him. I guess, I’ve been remiss for a while and should do something about it now.
Well, I just discovered that big chunks of the movie can be found on YouTube, but the greatest clip is this one, “Tradition” in Japanese:

How much does pharmaceutical industry control what appears in medical literature?

Ghosts, drugs, and blogs:

By its hidden nature, it is obviously a challenge to determine the exact prevalence of “ghost management,” defined by Sismondo as the phenomenon in which “pharmaceutical companies and their agents control or shape multiple steps in the research, analysis, writing, and publication of articles.”

Of course they fight against Open Access Publishing – too much sunshine scares them and would make them scurry away in panic…

Blogrolling for Today

The Oyster’s Garter


SLA’s Biomedical and Life Sciences Division blog


Interactive Publishing


New@Norris Library


T. rex eats fish…

Science Blogging Conference – who is coming? (Public Scientific Data)

2008NCSBClogo200.pngThere are 99 days until the Science Blogging Conference. The wiki is looking good, the Program is shaping up nicely, and there is more and more blog and media coverage already. There are already 85 registered participants and if you do not register soon, it may be too late once you decide to do so (we’ll cap at about 230). Between now and the conference, I am highlighting some of the people who will be there, for you to meet in person if you register in time.
Xan Gregg is local. He works for SAS (in the JMP division – a statistics software I have used a little bit back in the day) and he also blogs on Forth Go, mainly about programing and the representation of data.
Jean-Claude Bradley is a professor of chemistry at Drexel University. The biggest proponents of Open Notebook Science, he and the members of his lab make all of their daily lab work immediatelly public on their wiki. Check his blog and the Drexel Island in Second Life.
dock-beforeafter.JPG
At the Conference, Xan and Jean-Claude will lead a session on Public Scientific Data, i.e., posting, displaying, using and re-using scientific data online. Register today and participate in their session.

Knowledge-Able Citizen

The other day, Kate organized a talk by Sheila Jasanoff about science communication and subsequently summarized the talk on her blog. You need to read the whole thing, but the main point is that there is a difference between a one-to-many communication of usual science communication (the ‘public service model’), including science education, policy speaches, etc., more often than not presented by non-scientists, e.g., journalists, politicians, etc. and the many-to-many interactive engaging of scientists with the public in a two-way communication (the ‘public sphere model’):

Thus, perhaps the issue is not how we package science, but how we engage the public to think critically about the science. While packaging can be done carefully and with reference to specific audiences, Jasanoff maintained that packaging fails to energize the ideals of the public, which would represent the most forward-thinking approach, and thus may represent apathy or acquiescence. Only after conveying the deeper importance of science will the public lend its energy and support to the scientific enterprise, as, in Jasanoff’s words, “all human-created work is worth reflecting on.”

In a follow-up post Kate elaborates on the idea from her own perspective:

But scientific literacy stems from much more than this initial info-bite. I have rarely had someone who, after I’ve spouted some sort of scientific semi-nonsense, hasn’t asked me insightful questions and pushed to understand more about it. Whether a scientist or non-scientist, most people have an innate curiousity that drives us to understand our surroundings, who we are, how we work – all the major fundamental questions driving science itself. When kids are little, this curiosity is wonderfully unaffected, but as we age, we either grow more jaded, more insecure, more over-scheduled, more whatever that causes us to restrict that curiosity, securing it away with an airtight cap. So, to me, Jasanoff’s argument on behalf of the Knowledge-Able Citizen rings true – society is composed of people very much capable of knowledge, of curiousity, and of understanding. And, if many of those are willing to engage with science, given the opportunity and the time, it seems that the most effective way to communicate science is by nurturing that curiosity, encouraging critical scientific thinking, and engaging the public more deeply in thought-provoking, challenging issues. The seeds of it are already there.

ClockQuotes

Sometimes a scream is better than a thesis.
– Ralph Waldo Emerson

My Picks from ScienceDaily

Tiny Crow Camera Spies On Clever Birds:

A new technique developed by Oxford University zoologists enables researchers to ‘hitch a ride’ with wild birds and witness their natural and undisturbed behaviour. The scientists developed miniaturised video cameras with integrated radio-tags that can be carried by wild, free-flying birds. Using this new ‘video-tracking’ technology, they spied on the behaviour of New Caledonian crows, a species renowned for its sophisticated use of tools, recording behaviours never seen before.

Diet With A Little Meat Uses Less Land Than Many Vegetarian Diets:

A low-fat vegetarian diet is very efficient in terms of how much land is needed to support it. But adding some dairy products and a limited amount of meat may actually increase this efficiency, Cornell researchers suggest.

Early Apes Walked Upright 15 Million Years Earlier Than Previously Thought, Evolutionary Biologist Argues:

An extraordinary advance in human origins research reveals evidence of the emergence of the upright human body plan over 15 million years earlier than most experts have believed. More dramatically, the study confirms preliminary evidence that many early hominoid apes were most likely upright bipedal walkers sharing the basic body form of modern humans.

Difference Between Fish And Humans: Century-old Developmental Question Answered:

Embryologists at UCL (University College London) have helped solve an evolutionary riddle that has been puzzling scientists for over a century. They have identified a key mechanism in the initial stages of an embryo’s development that helps differentiate more highly evolved species, including humans, from less evolved species, such as fish. The findings of the research, funded by the Biotechnology and Biological Sciences Research Council (BBSRC), were published online by the journal Nature.

Today’s Carnivals

Tangled Bank #90 is up on The Other 95%
International Carnival of Pozitivities #16 is up on Ogre’s Politics and Views
The 140th Carnival of Education is up on The Tempered Radical
Carnival of The Liberals #49 is up on Tangled Up in Blue Guy
Carnival of Homeschooling #93 is up on Apollos Academy

Science Blogging Conference – who is coming? (Blogging Science Librarians)

2008NCSBClogo200.pngThere are 100 days until the Science Blogging Conference. The wiki is looking good, the Program is shaping up nicely, and there is more and more blog and media coverage already. There are already 83 registered participants and if you do not register soon, it may be too late once you decide to do so (we’ll cap at about 230). Between now and the conference, I will be highlighting some of the people who will be there, for you to meet in person if you register in time.
books1.gifChristina Pikas is a science librarian at The Johns Hopkins University Applied Physics Laboratory. She blogs on Christina’s LIS Rant and she can tell you how wonderful last year’s conference was.
John Dupuis is the Head of the Steacie Science & Engineering Library at York University in Toronto and, as you know, he runs the wonderful blog Confessions of a Science Librarian.

ClockQuotes

There are times when one would like to hang the whole human race and finish the farce.
– Mark Twain

With Arctic Ice Gone, Walruses go South to Alaska’s Beaches

Melting Sea Ice Forcing Walruses Ashore:

Thousands of walrus have appeared on Alaska’s northwest coast in what conservationists are calling a dramatic consequence of global warming melting the Arctic sea ice.
Alaska’s walrus, especially breeding females, in summer and fall are usually found on the Arctic ice pack. But the lowest summer ice cap on record put sea ice far north of the outer continental shelf, the shallow, life-rich shelf of ocean bottom in the Bering and Chukchi seas.

[Via Russ Williams]

New and Exciting in PLoS ONE

As usual on Tuesday nights, lots of cool stuff got published on PLoS ONE today. Here are some of my picks, but you should check all 30 of them (so, this week I am correct – there are now 1000+ articles on PLoS ONE):
Large-Scale Mitochondrial DNA Analysis of the Domestic Goat Reveals Six Haplogroups with High Diversity:

Studying the genetic diversity of domesticated animals can provide insights into their domestication, and even the history of human migration. In this paper Pompanon and colleagues study mitochondrial DNA diversity of the domestic goat from 2430 animals from widespread Old World geographic origins. The researchers find a very high degree of mitochondrial diversity amongst goats, but suggest that even with such a large dataset, little can be concluded about the origin of goat domestication.

The Environmental Dependence of Inbreeding Depression in a Wild Bird Population:

Evolutionary genetic theory suggests that if related individuals breed, their offspring are likely to be less “fit” (or evolutionarily successful) than outbred offspring, because of the increased chance of inheriting two copies of a harmful recessive gene. The authors of this paper analysed the interaction between environment and inbreeding on individual fitness in a population of great tits. Their results suggest that in wild populations, the interaction between inbreeding and environment on fitness may be considerable.

Wnt and TGF-β Expression in the Sponge Amphimedon queenslandica and the Origin of Metazoan Embryonic Patterning:

The origin of metazoan development and differentiation was contingent upon the evolution of cell adhesion, communication and cooperation mechanisms. While components of many of the major cell signalling pathways have been identified in a range of sponges (phylum Porifera), their roles in development have not been investigated and remain largely unknown. Here, we take the first steps toward reconstructing the developmental signalling systems used in the last common ancestor to living sponges and eumetazoans by studying the expression of genes encoding Wnt and TGF-β signalling ligands during the embryonic development of a sponge.
Using resources generated in the recent sponge Amphimedon queenslandica (Demospongiae) genome project, we have recovered genes encoding Wnt and TGF-β signalling ligands that are critical in patterning metazoan embryos. Both genes are expressed from the earliest stages of Amphimedon embryonic development in highly dynamic patterns. At the time when the Amphimedon embryos begin to display anterior-posterior polarity, Wnt expression becomes localised to the posterior pole and this expression continues until the swimming larva stage. In contrast, TGF-β expression is highest at the anterior pole. As in complex animals, sponge Wnt and TGF-β expression patterns intersect later in development during the patterning of a sub-community of cells that form a simple tissue-like structure, the pigment ring. Throughout development, Wnt and TGF-β are expressed radially along the anterior-posterior axis.
We infer from the expression of Wnt and TGF-β in Amphimedon that the ancestor that gave rise to sponges, cnidarians and bilaterians had already evolved the capacity to direct the formation of relatively sophisticated body plans, with axes and tissues. The radially symmetrical expression patterns of Wnt and TGF-β along the anterior-posterior axis of sponge embryos and larvae suggest that these signalling pathways contributed to establishing axial polarity in the very first metazoans.

Maladaptation and the Paradox of Robustness in Evolution:

Organisms use a variety of mechanisms to protect themselves against perturbations. For example, repair mechanisms fix damage, feedback loops keep homeostatic systems at their setpoints, and biochemical filters distinguish signal from noise. Such buffering mechanisms are often discussed in terms of robustness, which may be measured by reduced sensitivity of performance to perturbations.
I use a mathematical model to analyze the evolutionary dynamics of robustness in order to understand aspects of organismal design by natural selection. I focus on two characters: one character performs an adaptive task; the other character buffers the performance of the first character against perturbations. Increased perturbations favor enhanced buffering and robustness, which in turn decreases sensitivity and reduces the intensity of natural selection on the adaptive character. Reduced selective pressure on the adaptive character often leads to a less costly, lower performance trait.
The paradox of robustness arises from evolutionary dynamics: enhanced robustness causes an evolutionary reduction in the adaptive performance of the target character, leading to a degree of maladaptation compared to what could be achieved by natural selection in the absence of robustness mechanisms. Over evolutionary time, buffering traits may become layered on top of each other, while the underlying adaptive traits become replaced by cheaper, lower performance components. The paradox of robustness has widespread implications for understanding organismal design.

Homeotic Evolution in the Mammalia: Diversification of Therian Axial Seriation and the Morphogenetic Basis of Human Origins:

Despite the rising interest in homeotic genes, little has been known about the course and pattern of evolution of homeotic traits across the mammalian radiation. An array of emerging and diversifying homeotic gradients revealed by this study appear to generate new body plans and drive evolution at a large scale.
This study identifies and evaluates a set of homeotic gradients across 250 extant and fossil mammalian species and their antecedents over a period of 220 million years. These traits are generally expressed as co-linear gradients along the body axis rather than as distinct segmental identities. Relative position or occurrence sequence vary independently and are subject to polarity reversal and mirroring. Five major gradient modification sets are identified: (1)-quantitative changes of primary segmental identity pattern that appeared at the origin of the tetrapods ; (2)-frame shift relation of costal and vertebral identity which diversifies from the time of amniote origins; (3)-duplication, mirroring, splitting and diversification of the neomorphic laminar process first commencing at the dawn of mammals; (4)-emergence of homologically variable lumbar lateral processes upon commencement of the radiation of therian mammals and ; (5)-inflexions and transpositions of the relative position of the horizontal septum of the body and the neuraxis at the emergence of various orders of therian mammals. Convergent functional changes under homeotic control include laminar articular engagement with septo-neural transposition and ventrally arrayed lumbar transverse process support systems.
Clusters of homeotic transformations mark the emergence point of mammals in the Triassic and the radiation of therians in the Cretaceous. A cluster of homeotic changes in the Miocene hominoid Morotopithecus that are still seen in humans supports establishment of a new “hominiform” clade and suggests a homeotic origin for the human upright body plan.

Nullomers: Really a Matter of Natural Selection?:

Nullomers are short DNA sequences that are absent from the genomes of humans and other species. Assuming that nullomers are the signatures of natural selection against deleterious sequences in humans, the use of nullomers in drug target identification, pesticide development, environmental monitoring, and forensic applications has been envisioned.
Here, we show that the hypermutability of CpG dinucleotides, rather than the natural selection against the nullomer sequences, is likely the reason for the phenomenal event of short sequence motifs becoming nullomers. Furthermore, many reported human nullomers differ by only one nucleotide, which reinforces the role of mutation in the evolution of the constellation of nullomers in populations and species. The known nullomers in chimpanzee, cow, dog, and mouse genomes show patterns that are consistent with those seen in humans.
The role of mutations, instead of selection, in generating nullomers cast doubt on the utility of nullomers in many envisioned applications, because of their dependence on the role of lethal selection on the origin of nullomers.

Demographic Histories of ERV-K in Humans, Chimpanzees and Rhesus Monkeys:

We detected 19 complete endogenous retroviruses of the K family in the genome of rhesus monkey (Macaca mulatta; RhERV-K) and 12 full length elements in the genome of the common chimpanzee (Pan troglodytes; CERV-K). These sequences were compared with 55 human HERV-K and 20 CERV-K reported previously, producing a total data set of 106 full-length ERV-K genomes. Overall, 61% of the human elements compared to 21% of the chimpanzee and 47% of rhesus elements had estimated integration times less than 4.5 million years before present (MYBP), with an average integration times of 7.8 MYBP, 13.4 MYBP and 10.3 MYBP for HERV-K, CERV-K and RhERV-K, respectively. By excluding those ERV-K sequences generated by chromosomal duplication, we used 63 of the 106 elements to compare the population dynamics of ERV-K among species. This analysis indicated that both HERV-K and RhERV-K had similar demographic histories, including markedly smaller effective population sizes, compared to CERV-K. We propose that these differing ERV-K dynamics reflect underlying differences in the evolutionary ecology of the host species, such that host ecology and demography represent important determinants of ERV-K dynamics.

SIRNA-Directed In Vivo Silencing of Androgen Receptor Inhibits the Growth of Castration-Resistant Prostate Carcinomas:

Prostate carcinomas are initially dependent on androgens, and castration or androgen antagonists inhibit their growth. After some time though, tumors become resistant and recur with a poor prognosis. The majority of resistant tumors still expresses a functional androgen receptor (AR), frequently amplified or mutated.
To test the hypothesis that AR is not only expressed, but is still a key therapeutic target in advanced carcinomas, we injected siRNA targeting AR into mice bearing exponentially growing castration-resistant tumors. Quantification of siRNA into tumors and mouse tissues demonstrated their efficient uptake. This uptake silenced AR in the prostate, testes and tumors. AR silencing in tumors strongly inhibited their growth, and importantly, also markedly repressed the VEGF production and angiogenesis.
Our results demonstrate that carcinomas resistant to hormonal manipulations still depend on the expression of the androgen receptor for their development in vivo. The siRNA-directed silencing of AR, which allows targeting overexpressed as well as mutated isoforms, triggers a strong antitumoral and antiangiogenic effect. siRNA-directed silencing of this key gene in advanced and resistant prostate tumors opens promising new therapeutic perspectives and tools.

Implementing Routine HIV Testing: The Role of State Law:

In September 2006, the Centers for Disease Control and Prevention (CDC) recommended routine HIV testing for all Americans aged 13-64, which would eliminate requirements for written consent and pretest counseling as previously required. However, this approach may conflict with state requirements concerning pretest counseling and informed consent for HIV testing. Our survey of state HIV testing laws demonstrates that the majority of states have HIV testing requirements that are inconsistent with the CDC’s recommendations. Moreover, states that have recently amended their laws have not eased the requirements for pretest counseling and informed consent. The reasons for the persistence of these legal requirements must be understood to effect policy changes to increase HIV testing.

Moderate Neonatal Stress Decreases Within-Group Variation in Behavioral, Immune and HPA Responses in Adult Mice:

The significance of behavioral neuroscience and the validity of its animal models of human pathology largely depend on the possibility to replicate a given finding across different laboratories. Under the present test and housing conditions, this axiom fails to resist the challenge of experimental validation. When several mouse strains are tested on highly standardized behavioral test batteries in different laboratories, significant strain×lab interactions are often detected. This limitation, predominantly due to elevated within-group variability observed in control subjects, increases the number of animals needed to address fine experimental questions. Laboratory rodents display abnormal stress and fear reactions to experimental testing, which might depend on the discrepancy between the stability of the neonatal environment and the challenging nature of the adult test and housing conditions.
Stimulating neonatal environments (e.g. brief maternal separations, increased foraging demands or maternal corticosterone supplementation) reduce stress and fear responses in adulthood. Here we tested whether reduced fearfulness associated with experimental testing would also reduce inter-individual variation. In line with our predictions, we show that a moderate elevation in neonatal corticosterone through maternal milk significantly reduces fear responses and inter-individual variability (average 44%) in adult mouse offspring.
We observed reduced variation in pain perception, novelty preference, hormonal stress response and resistance to pathogen infection. This suggests that the results of this study may apply to a relatively broad spectrum of neuro-behavioral domains. Present findings encourage a reconsideration of the basic principles of neonatal housing systems to improve the validity of experimental models and reduce the number of animals used.

Adaptive Evolution of a Stress Response Protein:

Some cancers are mediated by an interplay between tissue damage, pathogens and localised innate immune responses, but the mechanisms that underlie these linkages are only beginning to be unravelled.
Here we identify a strong signature of adaptive evolution on the DNA sequence of the mammalian stress response gene SEP53, a member of the epidermal differentiation complex fused-gene family known for its role in suppressing cancers. The SEP53 gene appears to have been subject to adaptive evolution of a type that is commonly (though not exclusively) associated with coevolutionary arms races. A similar pattern of molecular evolution was not evident in the p53 cancer-suppressing gene.
Our data thus raises the possibility that SEP53 is a component of the mucosal/epithelial innate immune response engaged in an ongoing interaction with a pathogen. Although the pathogenic stress mediating adaptive evolution of SEP53 is not known, there are a number of well-known candidates, in particular viruses with established links to carcinoma.

Habitat Fragmentation, Variable Edge Effects, and the Landscape-Divergence Hypothesis:

Edge effects are major drivers of change in many fragmented landscapes, but are often highly variable in space and time. Here we assess variability in edge effects altering Amazon forest dynamics, plant community composition, invading species, and carbon storage, in the world’s largest and longest-running experimental study of habitat fragmentation. Despite detailed knowledge of local landscape conditions, spatial variability in edge effects was only partially foreseeable: relatively predictable effects were caused by the differing proximity of plots to forest edge and varying matrix vegetation, but windstorms generated much random variability. Temporal variability in edge phenomena was also only partially predictable: forest dynamics varied somewhat with fragment age, but also fluctuated markedly over time, evidently because of sporadic droughts and windstorms. Given the acute sensitivity of habitat fragments to local landscape and weather dynamics, we predict that fragments within the same landscape will tend to converge in species composition, whereas those in different landscapes will diverge in composition. This ‘landscape-divergence hypothesis’, if generally valid, will have key implications for biodiversity-conservation strategies and for understanding the dynamics of fragmented ecosystems.

As always, look around, read the articles, rate them, post comments and annotations, send trackbacks if you blog about them, and if you want to do a Journal Club on one of them, let me know.

iPod wins the Nobel!

A newspaper should hire me to be that guy whose only job is to write titles and headlines. I can make them as misleading and sensationalist as the best of ’em!
But really, this year’s Nobel Prize for Physics is going to Albert Fert and Peter Grunberg for the invention of Giant Magnetoresistance. And yes, one of the many thingamajigs that uses this technology is iPod. But it makes for such a cool headline….

My Picks from ScienceDaily

Why Are Huge Numbers Of Camels Dying In Africa And Saudi Arabia?:

More than 2000 dromedaries — Arabian camels — have died since August 10 in Saudi Arabia. Various theories have been put forward to explain the numerous deaths. For several years, the Sahel and the Horn of Africa have also seen similar numbers of deaths. In 1995-1996, CIRAD worked on a fatal epizootic disease affecting dromedaries in Ethiopia.

Humans Unknowing Midwives For Pregnant Moose:

When it’s time for moose to give birth in the Greater Yellowstone Ecosystem, they head to where it is safest from predators — namely closer to people, according to a new study by the Wildlife Conservation Society. Published in the Royal Society’s journal Biology Letters, the study says that moose avoid predation of their calves by grizzly bears by moving closer to roads and other infrastructure prior to giving birth.

Ancient African Megadroughts May Have Driven Human Evolution — Out Of Africa:

From 135,000 to 90,000 years ago tropical Africa had megadroughts more extreme and widespread than any previously known for that region, according to new research.

Chronic Arguing With Your Spouse May Raise Your Heart Disease Risk:

Individuals whose close relationships have negative aspects, such as conflict and adverse exchanges, appear to have an increased risk of heart disease than those with more positive close relationships, according to a new report.

Meet Fred Gould (sans mosquitoes) over pizza

Another thing I will also have to miss – the Inaugural Event of the 2007-2008 Pizza Lunch Season of the Science Communicators of North Carolina (SCONC), on October 24th at Sigma Xi Center (the same place where we’ll have the Science Blogging Conference). Organized by The American Scientist and the Burroughs Wellcome Fund, the first Pizza Lunch Session will feature Dr.Fred Gould, professor of Entomology and Genetics at NCSU (whose Insect Ecology class blows one’s mind – one of the best courses I have ever taken in my life). Fred recently received The George Bugliarello Prize for an interdisciplinary article Genetic Strategies for Controlling Mosquito-Borne Diseases. You can read an article about him in Raleigh News and Observer or, even better, listen to him on this podcast on State Of Things a few weeks ago. Notice with what disdain he utters the term “junk DNA” – only once in the entire hour – in order to explain it (away).

Science Cafe Raleigh – Dinosaurs!

Darn – I’ll be out of town on that date, but you make sure to show up! The October meeting of Science Cafe Raleigh will be on the 23rd at my favourite Irish pub in Raleigh, Tir Na Nog, and the speaker is Dr. Mary Schweitzer, the NCSU researcher who discovered and analyzed soft tissues in fossilized bones of T.rex:

Dinosaurs: Rewriting the Rules of Fossilization
Tuesday, October 23, 2007
6:30-8:30 p.m. with discussion beginning at 7 p.m. followed by Q&A
Location: Tir Na Nog, 218 South Blount St., 833-7795
Speaker: Dr. Mary Schweitzer
Dr. Mary Schweitzer studies dinosaur bones, as many paleontologists do. But recently she has been rewriting the rules of fossilization with her research at the microscopic and molecular levels. Her most fascinating finds have included preserved soft tissues, such as collagen and what appear to be ancient blood vessels, inside a 68-million-year-old T. rex. Come discover how her research has confirmed many connections between dinosaurs and birds and astonished scientists who have long believed that soft tissues would never be found inside fossilized bone.
Mary Schweitzer is the Museum’s Curator of Vertebrate Paleontology and an Associate Professor of Paleontology at NC State University. Her discovery of soft tissue inside a Tyrannosaurus rex thigh bone was named the 6th most important science story of 2005 by Discover magazine. She received a PhD in Biology and a Secondary Education Teaching Certificate from Montana State University, and a Bachelor’s degree in Communicative Disorders from Utah State University.