Green Rounds

Carnival of the Green #60 is up on One/Change
Grand Rounds Vol. 3, No. 17 is up on Six Until Me

My picks from ScienceDaily

Why Are Lions Not As Big As Elephants?:

Carnivores are some of the widest ranging terrestrial mammals for their size, and this affects their energy intake and needs. This difference is also played out in the different hunting strategies of small and large carnivores. Smaller species less than 15-20 kg in weight specialize on very small vertebrates and invertebrates, which weigh a small fraction of their own weight, whereas larger species (>15-20 kg) specialize on large vertebrate prey near their own mass. While carnivores around the size of a lynx or larger can obtain higher net energy intake by switching to relatively large prey, the difficulty of catching and subduing these animals means that a large-prey specialist would expend twice as much energy as a small-prey specialist of equivalent body size. In a new article published by PLoS Biology, Dr. Chris Carbone and colleagues from the Institute of Zoology, Zoological Society of London reveal how this relationship might have led to the extinction of large carnivores in the past and why our largest modern mammalian carnivores are so threatened.

Closing A Loophole In The RNA World Hypothesis:

New scientific research may close a major loophole in the RNA world hypothesis, the idea that ribonucleic acid — not the fabled DNA that makes up genes in people and other animals — was the key to life’s emergence on Earth 4.6 billion years ago. That hypothesis states that RNA catalyzed all the biochemical reactions necessary to produce living organisms. Only later were those self-replicating RNA units joined by organisms based on DNA, which evolved into more advanced forms of life.

Marine Bacteria Can Create Environmentally Friendly Energy Source:

Bacteria in the world’s oceans can efficiently exploit solar energy to grow, thanks to a unique light-capturing pigment. This discovery was made by researchers at University of Kalmar in Sweden, in collaboration with researchers in Gothenburg, Sweden, and Spain. The findings are described in an article in the journal Nature.
“It was long thought that algae were the only organisms in the seas that could use sunlight to grow,” says Jarone Pinhassi, a researcher in Marine Microbiology at Kalmar University College. These microscopic algae carry out the same process as green plants on land, namely, photosynthesis with the help of chlorophyll.
In 2000 scientists in the U.S. found for the first time that many marine bacteria have a gene in their DNA that codes for a new type of light-capturing pigment: proteorhodopsin.
Proteorhodopsin is related to the pigment in the retina that enables humans to see colors. It should be possible for this pigment to enable marine bacteria to capture solar light to generate energy, but until now it had not been possible to confirm this hypothesis.

An Animated Key To The World Of Young People:

Animated films produced by children offer wide-ranging insights into how the younger generation see the world around them. This was the conclusion of an extensive project run by the “Zoom” Children’s Museum in Vienna, Austria. During a number of workshops, children and young people were given the opportunity to make their own animated films. The messages these films contain have now been interpreted as part of the project, which is supported by the Austrian Science Fund (FWF). Initial results indicate that the young generation is in two minds about technological progress and is extremely worried about our impact on the environment. The study also showed that gender stereotypes are far from being overcome.

‘Flock of Dodos’ screenings in Raleigh

*N.C. Museum of Natural Sciences
/Downtown Raleigh/
**Thursday, January 18
“Flock of Dodos” screening with filmmaker, Randy Olson
7:00 p.m. Museum Auditorium
Free
*Filmmaker and Evolutionary Ecologist , Dr. Randy Olson, presents his
new film */Flock of Dodos/*: /*The Evolution / Intelligent Design Circus.*/
“Flock of Dodos” is the first feature-length documentary to present both
sides of the Intelligent Design / Evolution clash and tries to make
sense of the issue by visiting Olson’s home state of Kansas. The film
digs below the surface of the debate by examining the language being
used by both sides of this “circus” and the actual people presenting
each side. By doing so, Olson poses a serious question to the
scientific community as to who really is the “flock of dodos.”
After the screening, Dr. Olson will give a presentation followed by a
Question and Answer session.
The Museum will host additional free screenings of “Flock of Dodos” at
the following times:
Saturday, February 3, 3:00 p.m.
Saturday, February 10, 3:00 p.m.
Monday, February 12, Time is TBA — “Darwin Day”
We are hoping to have a panel of speakers in conjunction with the Darwin
Day screening. If you may be interested in participating on a panel to
further discuss this topic, please let us know.
The Museum is located at the corner of Jones and Salisbury Streets.
919.733.7450

SBC – NC’07

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Kirk Ross, columnist for (and former editor of) The Independent Weekly, as well as hard-blogger on Exile on Jones Street, The Mill and Cape Fear Mercury is coming to the 2007 North Carolina Science Blogging Conference. Are you?
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Clock Quotes

What I give form to in daylight is only one per cent of what I have seen in darkness.c
M. C. Escher (1898 – 1972), Quoted in Comic Sections, D. MacHale (Dublin 1993)

The Science Blogging Anthology – the Great Unveiling!

The Open Laboratory - order hereYes! It is finally here! What you have all been waiting for, impatiently, for three weeks! The Science Blogging Anthology is now for sale. Go to Lulu.com by clicking here (or click on the picture of the book to your right) and place your order! You can choose to buy a PDF to download (but do you really want to print out 336 pages!?) or order the book with its pretty cover – it takes only a couple of days to arrive at your doorstep.
You can see here how it all got started, just three weeks ago, smack in the middle of the holidays when nobody was online and traffic was down to a third of the normal – and the whole thing just exploded! It was meant to coincide with the inaugural Science Blogging Conference. You can check out all 218 finalists here and the Final 50 here. Don’t forget to check the comments! And if you are interested in the process, there have been numerous updates along the way here, here, here, here, here, here, here, here and here.
First, I’d like to thank everyone who submitted nominations, either their own or for other people’s work.
Second, I’d like to thank the distinguished panel of twelve reviewers who helped me narrow down the field from 218 to 50 posts: Janet, Karmen, Jennifer, Jenna, John, Bill, MC, Carl, Leo, Heinrich, John and one anonymous reviewer, as well as Anton who tremendously helped on the technical side of this endeavor.
Next, I’d like to thank all those who have helped spread the word about this so far, by posting links on their blogs: Arunn, MC, MC again, MC again, Ema, Ed, Ed again, Ed again, Archy, Archy again, Afarensis, Afarensis again, Larry, Bee, John, Dan, Martin, Sya, Sir Oolius, Florine, John, Rob, Curious Cat, Nuthatch, Aydin, Clare, Radagast, Pedro, Pedro again, Jenna, Anton, Luca, Liz, et alli and bbgm (did I miss anyone?).
And I thank in advance everyone who buys the book, e-mails their friends about it, links to this post from their blogs, or places this post on one of the social networking sites (see the buttons at the bottom of the post).
What about next year?
This anthology was designed to coincide with the first Science Blogging Conference – and we made it in the nick of time – the conference is this Saturday. We are hoping to make the conference an annual event, so why not the anthology again, to be published in late January of next year, and the year after that…? I have already heard (and read on blogs) the sentiment that there should be one every year.
I have asked for volunteers to be the editor of the next edition, but nobody raised their hand, and a few people suggested (mostly in the comments on the ‘Final 50’ post) I should do it again. Frankly, I enjoyed the experience as frantic as it was and I’d like to do it again. And next year it will not be so frantic: instead of three weeks between the first idea and the book actually seeing print, I’ll have twelve months to slowly collect quality posts and get a ‘feel’ for the annual output of the science-blogging world.
So, please, at any time between January 1st and December 31st 2007, if you write a kick-ass post, let me know. I’ll bookmark it and jot a few notes to myself and take it into consideration for the next edition. If you see a great science-related post, especially written by a blogger who may be new and not yet the part of the inner circle of us science bloggers, please let me know. If your best post is in another language, have it translated into English and send me the permalink – let’s increase the diversity!
Also, send your best stuff to appropriate blog carnivals. I will dutifully monitor posts that appear on the following carnivals: Tangled Bank, Grand Rounds, Carnival of the Green, Skeptic’s Circle, Mendel’s Garden, Bio::Blogs, Encephalon, Animalcules, Circus of the Spineless, I And The Bird, Festival of the Trees, Oekologie, Four Stone Hearth, Panta Rei, Philosophia Naturalis, Change Of Shift, Pediatric Grand Rounds, Radiology Grand Rounds and any new ones that may appear this year.
I hope you enjoy the book and that you will continue to visit the many science bloggers who have been linked in the semi-finals and finals and many more found on their blogrolls.
Buy the book here!
Update: I’d also like to thank everyone who is helping to spread the word by linking to this post from their blogs, including (let me know if I missed you):
Stranger Fruit, Archy, Evolving Thoughts, Nonoscience, Accidental Blogger, The Loom, Intueri, Neurophilosophy, Aardvarchaeology, Bioephemera, Open…, Archaeoastronomy, Panda’s Thumb, Rhosgobel: Radagast’s Home, The Physics of Sex, Bark Bark Woof Woof, The Third Bit, The Real Paul Jones, Bootstrap Analysis, Open Reading Frame, Science And Politics, Stoat, Cognitive Daily, De Rerum Natura , Bee Policy, Liberal Coalition, Words and Pictures, Uncertain Principles, Pharyngula, Aetiology, The Blog Herald, Scientific Assessment, Shakespeare’s Sister, Scientia Est Potentia, Pegase, BlogSheroes, Idea Consultants, Pure Pedantry, Confessions of a Science Librarian, Thoughts from Kansas, Arbitrary Marks, Carolina Blog Consultants, Omni Brain, The Education Wonks, Lean Left, Ed Cone’s Word Up, Skeptico, The Scientific Indian, Retrospectacle: A Neuroscience Blog, Emergiblog, bbgm, Sandwalk, Page 3.14, Neurontic, today’s The Buzz Of The Blogosphere on the front page of Scienceblogs.com, Easternblot, Siris, The Voltage Gate, A Somewhat Old, But Capacious Handbag, The Scientific Activist, 10,000 Birds, digg, stumbleupon, The Daily Transcript, Newton’s Binomium, Pimm, Snail’s Tales, Dispatches from the Culture Wars, Respectful Insolence, Mistersugar, Creek Running North, Alone on a Boreal Stage, Seed’s Daily Zeitgeist, Migrations, SharpBrains, Element List, Et alli…, Syaffolee, Neurocritic, Epigenetics News, Bad Astronomy blog, Science Made Cool, Chaotic Utopia, Afarensis, Abnormal Interests, MSNBC Clicked, The Isle, Hot Cup Of Joe, She Flies With Her Own Wings, A DC Birding Blog, And Doctor Biobrain’s Response Is…, The Blog That Ate Manhattan, East Ethnia, Desipundit, Decorabilia, Yesh, Sereniteit, Lab Cat, Johnkemeny, The Greenbelt, Thomasburg Walks, Milkriverblog, Science!, my DailyKos Diary, Genetics and Health, Cosmic Variance, Darwin.net, Examining Room of Dr.Charles, Cognitive Daily, DocBug, Burning Silo, Brainshrub, Resonance Partnership Blog, Claw of the Conciliator, Bibliothecaris in Blog, De conceptuele ingenieur, Ciencia em dia, Mike the Mad Biologist, Discovering Biology in a Digital World, Tales from the Microbial Laboratory, John Hawks Anthropology Blog, Science Notes, Curious Cat, Galactic Interactions, SciBos – Corie Lok’s blog, Cocktail Party Physics, The Countess, Element List, Petrona, A Blog Around The Clock, Red State Rabble, Pen-Elayne on the Web, Total Information Awareness, Postscripts, Terra Sigillata, Guide To Reality, Pennsylvania Citizens for Science, Ivory-bills LIVE!!, Novelr.com, Daily Kos, The Executioners Thong, Uma Malla pelo mundo, JORGE GAJARDO ROJAS, Ouroboros, Savage Minds, Neural Gourmet,

SBC – NC’07

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Greg Corrin and Alex Gunn are coming to the 2007 North Carolina Science Blogging Conference. Are you?
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History Blogging of the fortnight

The 46th History Carnival is up on Investigations of a Dog.

My picks from ScienceDaily

New Group Of Algae Discovered: Picobiliphytes:

An international group of researchers has succeeded in identifying a previously unknown group of algae. As currently reported in the scientific journal Science, the newly discovered algae are found among the smallest members of photosynthetic plankton – the picoplankton (‘Picobiliphytes: A marine picoplanktonic algal group with unknown affinities to other Eukaroytes” Science, Vol. 316’). On account of the minute size of the organisms (no more than a few thousandth of a millimetre) and the appearance of phycobili-proteins, researchers have termed the new group Picobiliphyta.

Lost Dogs Found More Often Than Lost Cats, Study Suggests:

A lost dog is more likely to be reunited with its owner than a lost cat, according to two new studies. In one city in southwestern Ohio , researchers found that 71 percent of lost dogs were found, compared to just 53 percent of lost cats. More than a third of the recovered dogs were found by a call or visit to an animal shelter. More than one in four dogs were found because the animal wore a dog license or identification tag at the time of its disappearance.

Genetic Marker Predicts Pig Litter Size:

Bigger is often better where litter size is concerned, especially when it comes to piglets. Scientists with the Agricultural Research Service’s (ARS) U.S. Meat Animal Research Center in Clay Center, Neb., have identified a genetic marker that could help pig breeders select animals for increased uterine capacity and litter size. This genetic discovery could give swine breeding a boost in efficiency.

Rare Plant From Dinosaur Age:

A relic plant that once co-existed with dinosaurs has taken up residence in the University of Wisconsin-Madison botany greenhouses. Known as the Wollemi pine, the plant was presumed extinct until a “bushwalker” named David Noble discovered it in an Australian national park in 1994. As part of a worldwide effort to conserve and propagate the tree species – one of the oldest and rarest on earth – botany greenhouse director Mo Fayyaz recently purchased a foot-tall Wollemi pine seedling. A limited number of the plants just became available in the United States through National Geographic.

Stealth Technology Maintains Fitness After Sex: How ‘DNA Parasites’ Can Increase Spread Of Antibiotic Resistance:

Pathogens can become superbugs without their even knowing it, research published today in Science shows. ‘Stealth’ plasmids – circular ‘DNA parasites’ of bacteria that can carry antibiotic-resistance genes – produce a protein that increases the chances of survival and spread of the antibiotic-resistant strain. Low-cost plasmids, described for the first time in the study are a threat to use of antibiotics.

Large Size Crucial For Amazon Forest Reserves:

An international research team has discovered that the size of Amazon forest reserves is yet more important than previously thought. Their findings, to be published this week (January 12th) in the journal Science, underscore the importance of protecting the Amazon in large stretches of primary forest. The article summarizes bird survey results from the world’s largest and longest running experimental study of forest fragmentation — the Biological Dynamics of Forest Fragments Project, sponsored by the Smithsonian Tropical Research Institute, the Smithsonian Institution and the National Institute for Amazon Research, in Brazil.

States With Higher Levels Of Gun Ownership Have Higher Homicide Rates:

Firearms are used to kill two out of every three homicide victims in America.. In the first nationally representative study to examine the relationship between survey measures of household firearm ownership and state level rates of homicide, researchers at the Harvard Injury Control Research Center found that homicide rates among children, and among women and men of all ages, are higher in states where more households have guns. The study appears in the February 2007 issue of Social Science and Medicine.

Anthology update….

We had a minor glitch with the cover. It is in the process of getting fixed right now. Stay tuned – the unveiling will be shortly….

MLK and Harlem


More information here and the entire speech (in three long clips) here.
Also, Brian Russell: Edwards and Permanent Military bases in Iraq

Randi, spoon-bending and the gullible blog-commenters

It appears that Ed Cone gets some commenters who desperately need to tune in next time Skeptic’s Circle comes around! They defend this crap (and, in turn, attack Randi of all people) in the comment thread! Oy vey! Some people still believe in spoon-bending and are vehemently defending it in a public forum with no sense of shame! What woo!

NeuroBlogging of the week

The 14th edition of Encephalon is up on Mixing Memory.

SBC – NC’07

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Kristen Novak and Bharat Chandramouli are coming to the 2007 North Carolina Science Blogging Conference. Are you?
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EcoBlogging of the month

The first edition of Oekologie is up on The Infinite Sphere

SBC – NC’07

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Alicia Cypress of The Washington Post and
Newsweek Interactive and Sarah Greene of the New York Times are coming to the 2007 North Carolina Science Blogging Conference. Are you?
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Clock Quotes

I have never taken any exercise except sleeping and resting.
Mark Twain (1835 – 1910)

Koufax Awards update

Are you putting in your nominations for the Koufax Awards? Just post links in the comments here. Then, drop a few dollars to the Wampum folks to help them run the Awards. There are only a few days left until the nominations close. Dont’ know who to nominate? Check out my Blogroll

SBC – NC’07

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Hillary Davis and Judy Knight are coming to the 2007 North Carolina Science Blogging Conference. Are you?
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SBC – NC’07

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Mauricio Borgen is coming to the 2007 North Carolina Science Blogging Conference. Are you?
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Anthology update….

The entire file is now finished – the last quick round of proofreading is all that’s left before the Grand Unveiling right at this place (likely tomorrow morning).
Since people nominated the best science posts and those tend to be the most substantial posts which tend to be very long posts (sometimes in two or more parts), the book will be much thicker than I expected – around 330 pages! This, unfortunately, will also make it a tad little bit more expensive (still not hugely expensive – this is online, print-on-demand model of publishing after all).
I got 13 out of 50 letters of agreement/copyright so far. Instead of e-mailing everyone to confirm, I will wait another couple of weeks and only contact those whose letter I did not receive by then, if any.
Oh, and once the book is announced and up for sale, I’d appreciate you spreading the word – e-mail your friends, post a link on your blog, nominate it on places like digg/reddit/delicious/stumbleupon/endgadget/metafilter/slashdot, and buy the book!

SBC – NC’07

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Mark Case is coming to the 2007 North Carolina Science Blogging Conference. Are you?
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Clock Quotes

Oh! Do not attack me with your watch. A watch is always too fast or too slow. I cannot be dictated to by a watch.
Jane Austen (1775 – 1817), Mansfield Park

Nobody here but us chickens…

I have just realized that I keep mentioning David Sloan Wilson a lot (see the list of links below), always in a positive light as I think he is one of the pioneers of modern evolutionary theory (as soon as those drunk on Williams 1966 and Dawkins’ opus retire or die) but have never really written a good post on group selection. I’ll have to do this one day soon – that may be my contribution to the Basic Concepts collection.
Anyway, Wlison just gave a talk in which he presented my favourite example of the test of group selection – in chickens:

Two experiments using chickens show another aspect of evolution regarding selection. In the first experiment, groups of chickens in cages were evaluated for egg-laying. The best egg-layer within each cage was chosen and put together with the other prolific egg-layers. The second experiment took the best caged groups of egg-layers. The result of the second experiment after a few generations was healthy, sociable, egg-laying chickens. The result of the first experiment after a few generations was fighting and anti-social chickens that maimed and killed each other.
“You pick the best,” Wilson joked, “and in six generations you get sociopaths.”

Those two papers actually came out in Poultry Science, not Evolution, thus they are not as well known by the evolutionary community as they should be. What Wilson did not mention in his talk is that the group-selection experiments resulted, over just a few generations, in a greater egg-production than ever achived in a couple of thousand years of selective breeding of chicken. It also resulted in a complete loss of need for de-beaking of chickens, which is a nasty procedure in poultry industry.
Perhaps these chicken don’t peck each other to death because they all adopted the identical religious beliefs LOL!
You can see my earlier mentions of Wilson here (really this), here, here here, here, here, here, here, and here.
Update: Mike has more.

SBC – NC’07

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Brian Kloepfer of the Carolina Biological Supply Co. is coming to the 2007 North Carolina Science Blogging Conference. Are you?
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SBC – NC’07

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Liz Borkowski is coming to the 2007 North Carolina Science Blogging Conference. Are you?
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My picks from ScienceDaily

There’s No Scent Like Home: New Research Shows Larval Fish Use Smell To Return To Coral Reefs:

Tiny larval fish living among Australia’s Great Barrier Reef spend the early days of their lives swept up in ocean currents that disperse them far from their places of birth. Given such a life history, one might assume that fish populations would be genetically homogeneous within the dispersal area. Yet the diversity of reef fish species is high and individual reefs contain different fish populations. For such rich biodiversity to have evolved, some form of population isolation is required. New research from MBL (Marine Biological Laboratory) Associate Scientist Gabriele Gerlach, MBL Adjunct Senior Scientist Jelle Atema, and their colleagues shows that some fish larvae can discriminate odors in ocean currents and use scent to return to the reefs where they were born. The olfactory imprinting of natal reefs sheds light on how such a wide diversity of species arose. The homing behavior of reef fishes, the researchers contend, could support population isolation and genetic divergence that may ultimately lead to the formation of new species.

World’s Largest Flower Evolved From Family Of Much Tinier Blooms:

The plant with the world’s largest flower — typically a full meter across, with a bud the size of a basketball — evolved from a family of plants whose blossoms are nearly all tiny, botanists write this week in the journal Science. Their genetic analysis of rafflesia reveals that it is closely related to a family that includes poinsettias, the trees that produce natural rubber, castor oil plants, and the tropical root crop cassava. [—] “For nearly 200 years rafflesia’s lineage has confounded plant scientists,” says Davis, an assistant professor of organismic and evolutionary biology in Harvard’s Faculty of Arts and Sciences. “As a parasite living inside the tissue of a tropical vine, the plant lacks leaves, shoots, or roots, making it difficult to compare to more conventional plants. Most efforts to place plants in the botanical tree of life in the past 25 years have tracked ancestry using molecular markers in genes governing photosynthesis. Rafflesia is a non-photosynthetic parasite, and those genes have apparently been abandoned, meaning that to determine its lineage we had to look at other parts of the plant’s genome.”

Prenatal Cocaine’s Lasting Cellular Effects:

Although the “crack baby” hysteria of the 1980s was greatly exaggerated, cocaine use during pregnancy can cause subtle but disabling cognitive impairments — attention deficits, learning disabilities and emotional problems. A recent study by investigators at the Vanderbilt Kennedy Center for Research on Human Development may help explain the long-term behavioral and neurological problems associated with prenatal exposure to cocaine. In a recent issue of the Journal of Neuroscience, Gregg Stanwood, Ph.D., and Pat Levitt, Ph.D., report that prenatal cocaine exposure in rabbits causes a long lasting displacement of dopamine receptors in certain brain cells, which alters their ability to function normally.

Musician In The Mirror: New Study Shows Brain Rapidly Forms Link Between Sounds And Actions That Produce Them:

A new imaging study shows that when we learn a new action with associated sounds, the brain quickly makes links between regions responsible for performing the action and those associated with the sound.

Basic Terms and Concepts – update

The ‘Basic Concepts’ series has started. Here are the first two, defined and explained:
Evolution
Clade
We are thinking of a way to store all of these posts in one place for easy reference. I’ll let you know when that happens.

SBC – NC’07

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Steven Hamelly is coming to the 2007 North Carolina Science Blogging Conference. Are you?
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Clock Quotes

There are two kinds of light–the glow that illuminates, and the glare that obscures.
James Thurber (1894 – 1961)

SBC – NC’07

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Russ Campbell of the Burroughs Wellcome Fund is coming to the 2007 North Carolina Science Blogging Conference. Are you?
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Friday Weird Sex Blogging – Sensory Neuroscience

In a time-crunch like this, one can always count on Buzz Skyline to save the day…..

Where I’ve been

Tagged by Josh:

This application is created by interactive maps.
You can also have your visited countries map on your site.

If you see this message, you need to upgrade your flash player.

var so = new SWFObject(“http://www.interactivemaps.org/visited_countries/visited_countries.swf”, “visitedcountries”, 364, 225, “7”, “#000000″);
addLocation(‘AT’, ”, ”, ”); //Austria
addLocation(‘BE’, ”, ”, ”); //Belgium
addLocation(‘BA’, ”, ”, ”); //Bosnia and Herzegovina
addLocation(‘HR’, ”, ”, ”); //Croatia
addLocation(‘DK’, ”, ”, ”); //Denmark
addLocation(‘DE’, ”, ”, ”); //Germany
addLocation(‘HU’, ”, ”, ”); //Hungary
addLocation(‘IT’, ”, ”, ”); //Italy
addLocation(‘NL’, ”, ”, ”); //Netherlands
addLocation(‘CS’, ”, ”, ”); //Serbia and Montenegro
addLocation(‘SK’, ”, ”, ”); //Slovakia
addLocation(‘SI’, ”, ”, ”); //Slovenia
addLocation(‘SE’, ”, ”, ”); //Sweden
addLocation(‘UK’, ”, ”, ”); //United Kingdom
addLocation(‘US’, ”, ”, ”); //United States
addToFlash();
so.addVariable(“stageWidth”, 364);
so.addVariable(“stageHeight”, 225);
so.addVariable(“infoOver”, “enabled”);
so.addVariable(“zoomFunction”, “checked”);
so.addVariable(“bgColor”, “666666”);
so.addVariable(“visitedColor”, “5EB7DE”);
so.addVariable(“notVisitedColor”, “CDCDCD”);
so.addVariable(“countryBordersColor”, “666666”);
so.addVariable(“helpTextColor”, “000000”);
so.addVariable(“helpText”, “Mark the area you wish to zoom in”);
so.addParam(“scale”, “noscale”);
so.addParam(“salign”, “lt”);
so.write(“visitedcountries”);

Make your visited countries map Interactive flash maps
This application is created by interactive maps.
You can also have your visited states map on your site.

If you see this message, you need to upgrade your flash player.

var so = new SWFObject(“http://www.interactivemaps.org/visited_states/visited_states.swf”, “visitedstates”, 364, 195, “7”, “#000000″);
addLocation(‘FL’, ”, ”, ”); //Florida
addLocation(‘GA’, ”, ”, ”); //Georgia
addLocation(‘IL’, ”, ”, ”); //Illinois
addLocation(‘MA’, ”, ”, ”); //Massachusetts
addLocation(‘MD’, ”, ”, ”); //Maryland
addLocation(‘NC’, ”, ”, ”); //North Carolina
addLocation(‘NH’, ”, ”, ”); //New Hampshire
addLocation(‘NJ’, ”, ”, ”); //New Jersey
addLocation(‘NY’, ”, ”, ”); //New York
addLocation(‘PA’, ”, ”, ”); //Pennsylvania
addLocation(‘SC’, ”, ”, ”); //South Carolina
addLocation(‘VA’, ”, ”, ”); //Virginia
addLocation(‘VT’, ”, ”, ”); //Vermont
addToFlash();
so.addVariable(“stageWidth”, 364);
so.addVariable(“stageHeight”, 195);
so.addVariable(“infoOver”, “enabled”);
so.addVariable(“zoomFunction”, “checked”);
so.addVariable(“bgColor”, “666666”);
so.addVariable(“visitedColor”, “F0A74B”);
so.addVariable(“notVisitedColor”, “CDCDCD”);
so.addVariable(“countryBordersColor”, “666666”);
so.addVariable(“helpTextColor”, “000000”);
so.addVariable(“helpText”, “Mark the area you wish to zoom in”);
so.addParam(“scale”, “noscale”);
so.addParam(“salign”, “lt”);
so.write(“visitedstates”);

Make your visited states map Interactive flash maps

Compared to my brother and to my lab-buddy Chris who have travelled to, like, every continent, I have been pretty stationary in my life. Some of the countries and states I checked I really only travelled through (if I stopped to get a snack, it counts!). I am more of a type who goes to the same place over and over again (e.g., England).

Basic Terms and Concepts

I know I kinda burried that at the bottom of the previous post, but now that I see that a number of my SciBlings are trumpeting it loudly (see Chad, Tara, Janet, Afarensis and Mark, so far), I guess I’ll make a little bit louder call myself.
When you are immersed in a scientific field for a number of years, it is easy to forget that not everybody undrestands the basic concepts and terms of your field. While I always try to keep that in mind, I am sure I baffled you on occasion. Does everyone know the difference between phase, period and amplitude, the difference between phase-delay and phase-advance, what the acronyms PRC and SCN stand for?
You may have noticed the link on my side-bar to the Dictionary of Circadian Physiology, where you can get a quick definition of the term you are unsure of. Or, if you have time and inclination, you can dig deeper into my Clock Tutorials archives. For stuff in biology outside of chronobiology, you may be following my BIO101 lecture notes (hmmm, I should make a separate Category for it).
The bloggers here at Scienceblogs have a large repository of knowledge in a variety of areas of science. So, if you have questions about animal physiology, animal behavior, or chronobiology, you can always ask me. If I don’t know, I can always refer you to a SciBling who is more likely to do. Pick the terms or concepts that keep popping up but you are not exactly clear what they mean and I’ll try to explain.
Update: John Wilkins has broken the ice with the very first post in this series.

SBC – NC’07

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Eric Roach of Blogburst is coming to the 2007 North Carolina Science Blogging Conference. Are you?
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Crunch Time

Just a couple of quick notes on the run. Busy, busy, busy these days.
The conference is next week. Everything is falling nicely into place – the program is taking its final shape, the swag is growing and we have 160 people registered so far – only a couple of more spots left. Lots of things to do over the next few days to make sure that everything goes well.
The anthology is in its final proofreading phase – watch this place for the Big Announcement!
I also have to clean the house as we are having guests on Sunday, and the kids are both at home sick today (and there is no school on Monday for MLK day) so they need some attention (and some computer time as well).
So, blogging will be VERY light over the next few days, with only an occasional pre-scheduled post unless there are some big breaking news I feel I need to comment on.
In the meantime, you can keep delurking, you can make me a library card (and I’ll post the ones I like the best) like all my SciBlings are doing, or you can ask for future posts explaining some basic terms and concepts of my field – see how Chad explains what that is all about.
Finally, do a good deed today and help out Gary.
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My picks from ScienceDaily

Big-brained Birds Survive Better In Nature:

Birds with brains that are large in relation to their body size have a lower mortality rate than those with smaller brains, according to new research published in the journal Proceedings of the Royal Society B: Biological Sciences. The research provides the first evidence for what scientists describe as the ‘cognitive buffer’ hypothesis – the idea that having a large brain enables animals to have more flexible behaviours and survive environmental challenges.

The Price Of Vanity: Mating With Showy Males May Reduce Offspring’s Ability To Fight Off Pathogens:

In many animals, males advertise to potential mates with showy traits, many of which are linked to testosterone levels. However, a new study suggests that, in fish, choosing a flashier mate may cause future generations to be more susceptible to pathogens. In the January 2007 issue of The American Naturalist, a new study by Judith Mank (Uppsala University, Sweden) finds that mating with males who possess showy traits — such as bright colors or long tails and fins — results in higher testosterone levels in males over many generations. Because male and female testosterone levels are correlated, female choice also results in an increase in female testosterone levels.

How Are Phenotypic Differences Between Sexes Related To Phenotypic Variation Within Sexes?:

It has long been recognized that sexually dimorphic traits — traits that are systematically different between members of different sex in the same species, such as peacocks’ tail feathers — tend to vary a great deal among individual males, and that much of this within-sex variation depends on individual condition. Indeed, theory predicts that sexual dimorphism will evolve based on condition dependence so that, among traits, a more pronounced difference between male and female should be associated with a stronger response to variation in condition.

Beavers Helping Frogs And Toads Survive:

The humble beaver, besides claiming a spot of honour on the Canadian nickel, is also helping fellow species survive. Though considered a pest because of the culvert-clogging dams it builds on streams, the beaver is an ally in conserving valuable wetland habitat for declining amphibian populations, a University of Alberta study shows.

Scientists Discover Stage At Which An Embryonic Cell Is Fated To Become A Stem Cell:

Cambridge scientists have discovered the stage at which some of the cells of a fertilised mammalian egg are fated to develop into stem cells and why this occurs. The findings of the study, which overturn the long-held belief that cells are the same until the fourth cleavage (division) of the embryo, are reported in the journal Nature.

A Curry A Day Keeps The Doctor Away?:

The chemical that gives spicy food its kick could hold the key to the next generation of anti-cancer drugs that will kill tumours with few or no side effects for the patient, say academics at The University of Nottingham. A study by the scientists, published online in the journal Biochemical and Biophysical Research Communications, has proven for the first time that the chemical compound capsaicin — which is responsible for the burning sensation when we eat chillies — can kill cells by directly targeting their energy source.

Controlling Sexual Compatibility Can Help Control Spread Of Some Invasive Species:

University of California, Riverside genetics Professor Norman Ellstrand led a team of researchers whose findings suggest that harnessing the sexual requirements of some plants can help control the establishment of invasive species. Using the California wild radish as their model, Ellstrand and graduate student Caroline Ridley at the UCR Department of Botany and Plant Sciences co-authored the research study titled Population size and relatedness affect fitness of self-incompatible invasive plants, published in the Dec. 29 edition of the Proceedings of the National Academy of Sciences. The current article originated from a doctoral dissertation project by former UCR graduate student Diane Elam. Fellow graduate student Karen Goodell also worked on the project. Elam is now with the U.S. Fish and Wildlife Service’s Sacramento office. Karen Goodell now teaches at Ohio State University.

SBC – NC’07

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Ernie Hood, the host of the local science radio show Radio In Vivo is coming to the 2007 North Carolina Science Blogging Conference. Are you?
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Clock Quotes

Oh sleep! It is a gentle thing,
Beloved from pole to pole.

Samuel Taylor Coleridge (1772 – 1834)

SBC – NC’07

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Susie and Dave Moffat are coming to the 2007 North Carolina Science Blogging Conference. Are you?
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SBC – NC’07

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Three good blog-friends of mine, Bill Hooker of the Open Reading Frame blog, Larry Moran of the Sandwalk blog and David Warlick of the 2 Cents Worth blog are coming to the 2007 North Carolina Science Blogging Conference. Are you?
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Origin of Biological Diversity

Origin of Biological DiversityContinuing with the Thursday series of the BIO101 lecture notes. Check for errors of fact. Suggest improvements (June 01, 2006):

Continue reading

My picks from ScienceDaily

Why Doesn’t The Immune System Attack The Small Intestine? New Study Provides Unexpected Answer:

Answering one of the oldest questions in human physiology, researchers at Dana-Farber Cancer Institute have discovered why the body’s immune system – perpetually on guard against foreign microbes like bacteria — doesn’t attack tissues in the small intestine that harbor millions of bacteria cells. In a study in the February issue of Nature Immunology, and which is currently available on the journal’s Web site as an advanced online publication, investigators led by Shannon Turley, PhD, of Dana-Farber identify an unlikely group of peacemakers: lymph node cells that instruct key immune system cells to leave healthy tissue alone. The finding, which illuminates a previously unknown corner of the human immune system, may lead to new forms of treatment for autoimmune diseases such as Type 1 diabetes and multiple sclerosis.

European Space Agency Launches New Project To Protect Biodiversity:

The world’s biodiversity is vanishing at an unprecedented rate – around 100 species every day – due to factors such as land use change and pollution. Addressing this threat, world governments agreed through the UN Convention on Biological Diversity to reduce significantly the current rate of biodiversity loss by 2010. To support this initiative, ESA has kicked off its new DIVERSITY project.

Researcher Placing Eye Implants In Cats To Help Humans See:

In “Star Trek: The Next Generation,” Geordi La Forge is a blind character who can see through the assistance of special implants in his eyes. While the Star Trek character “lives” in the 24th century, people living in the 21st century may not have to wait that long for the illuminating technology. Kristina Narfstrom, a University of Missouri-Columbia veterinary ophthalmologist, has been working with a microchip implant to help blind animals “see.” According to Narfstrom, the preliminary results are promising.

Children’s Packed Lunches: Are They Even Worse Than Turkey Twizzlers?:

Packed lunches taken to school by 7-year olds are even less healthy than school meals used to be before English TV chef Jamie Oliver set out to reform them. The Children of the 90s study, based at the University of Bristol, has revealed that in the year 2000, school meals were every bit as bad as Jamie Oliver suggested – but that children given packed lunches instead were even worse off nutritionally.

Adding Activity To Video Games Fights Obesity, Study Shows:

If playing video games makes kids less active — and contributes to obesity — why not create more video games that require activity? That’s the question prompted by a Mayo Clinic research study published in the current issue of the medical journal Pediatrics.

Benefits Of Testosterone Treatment Unknown, Research Shows:

Little research exists demonstrating that testosterone is both safe from the cardiovascular standpoint and effective to treat sexual dysfunction, reveal Mayo Clinic researchers in two new studies. In articles published in the January issue of Mayo Clinic Proceedings, Mayo Clinic physicians call for large studies to help clinicians and patients make informed decisions about when testosterone should be prescribed.

Education Does Not Protect Against Age-related Memory Loss, Say Researchers:

Adults over 70 with higher levels of education forgot words at a greater rate than those with less education, according to a new study from the University of Southern California. The findings, published in the current issue of Research on Aging, suggest that after age 70, educated adults may begin to lose the ability to use their schooling to compensate for normal, age-related memory loss.

John Edwards is right on HealthCare

For some reason, Dr.Charles is not allowing comments on this post. If you read it and find yourself nodding your head in agreement, stop and think again. Then read this as anti-toxin. Don’t fall for the rhetoric of people whose financial interests are at stake here.
Then read this book and see for yourself whose mind and heart is on the right side of the issue.
Update: Pharyngula and Dave have more. The post by Dr.Charles is now open to comments. I found myself in a very unenviable position of simultanously defending my friend Dr.Charles while attacking his post at the same time, and simultaneously attacking AND defending (for different aspects) the author of the DailyKos Diary which called on Seed to fire Dr.Charles over that one post – who is also a good friend of mine. Now they will both hate me!
Different parts of the blogosphere have different rituals, different norms, different tone. This was apparently a clash of two blogospheric mindsets. Supporters of various candidates are already sniping at each other with high levels of aggression. So, Dr.Charles likes Obama, I like Edwards, but we are both Democrats and we can fight it out in different ways, using different tone – not neccessarily the DKo-stypical angry tone. On DKos, you dig into the comments and fight there. In other parts of the blogosphere, I can fight back by posting a post of my own blasting Obama if I wanted, or countering his anti-Edwards claims as I did here.

SBC – NC’07

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Robert Gotwals of the NC School of Science and Mathematics and Jon Hill from WCHL radio are coming to the 2007 North Carolina Science Blogging Conference. Are you?
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Clock Quotes

All my possessions for a moment of time.
Elizabeth I (1533 – 1603)

It’s hard to quit blogging for good….

Those of you who were around the Progressive Blogosphere a couple of years back probably remember Mick Arran and his Omnium blog (or his other blogs). Due to financial difficulties, Mick had to shut down all his blogging and online activities about a year ago. Fortunately, his life took a turn for the better and now Mick is back online, with his brand new blog Witness For The Prosecusion. Go say ‘Welcome Back’.

SBC – NC’07

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Jacqueline Floyd of the Element List blog and Vedana Vaidhyanathan of The Blog That Never Was are coming to the 2007 North Carolina Science Blogging Conference. Are you?
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BirdBlogging of the week

I and the Bird Edition No 40 is up on Peregrine’s Bird Blog

The Humpty-Dumpty Affair

My SciBling, Mike Dunford, who is a military husband has penned an eloquent essay on Iraq and what it all means. Please read it and link it from your blogs.