Category Archives: Space

ScienceOnline2013 – interview with Karyn Traphagen

Every year I ask some of the attendees of the ScienceOnline conferences to tell me (and my readers) more about themselves, their careers, current projects and their views on the use of the Web in science, science education or science communication. So now we continue with the participants of ScienceOnline2013. See all the interviews in this series here.

Today my guest is Karyn Traphagen, the Executive Director of ScienceOnline (blog, Twitter).

Welcome to A Blog Around The Clock. Would you, please, tell my readers a little bit more about yourself? Where are you coming from (both geographically and philosophically)? What is your (scientific and other) background?

I was born in New Jersey (please don’t hold that against me).

I suppose, in retrospect, I was one of the Apollo generation kids and that has affected me more than I realized. I clearly remember being a very young child and standing by some adults who were debating whether or not we would really get to the moon and back. I grew up with the Gemini missions and Apollo missions. My entire elementary school would gather in the gymnasium around one television to watch launches and splashdowns.

After I started kindergarten we stayed in the same house until I graduated from high school (remarkable when you learn that I have moved 26 times since then). I was the oldest of four girls. My father was part of my life until I was in middle school (and then he entered my life again after I had my own children), but it was my mother who really instilled in me the interest and discipline and confidence that make me so curious and adventurous.

One of my favorite memories is constructing furniture with my mom. In those days there were no IKEA designers with clear instructions. We had all those foreign diagrams and crazy languages to guide us. I learned at an early age how to persevere, tinker, and make it work. I guess you could say we had a Maker culture and DIY house before the terms were popularized.

I also had an amazing chemistry set (which no doubt is illegal these days).  Of course, all the illustrations were of boys, but that didn’t bother me one bit. I had a picture of my mom before she was married and she was working in a lab with all manner of science glassware. I thought that was the best picture ever of my mom. Even though she stopped working in the lab to get married and have us kids, I thought it was perfectly normal to want to do science. It didn’t even occur to me that I couldn’t figure these things out. I also had a small mirror microscope that was nearly impossible to get to work. But I still had slides and slides of samples I collected. Even today my office is full of geologic and botanical specimens I’ve collected.

It wasn’t until later in life that I realized we were really poor growing up because I always thought we had the most amazing house. It was a tiny rental duplex. But we had file cabinets full of paper, pens, glue, tape, crayons, cardboard, glitter, and all sorts of creative stuff. What I didn’t realize was that it was all cast-offs from mailing rooms and offices (the paper was discarded stationary and onion skin paper for carbon copies). So, again, my mom was ahead of the times with re-purposing and recycling even before the first Earth Day had been organized.

Speaking of Earth Day, I can remember as a young girl how much I loved that first festival. My best friend and I were so impressed that we started our own Anti-Pollution Club. I doubt we really did very much to affect the trash and pollution in our town, but I know it did change us.

Another thing that changed me was the monthly arrival of the National Geographic magazine. Someone must have given us a subscription, because I’m sure we couldn’t have afforded it. But I (absolutely) loved reading about Jane Goodall. I wanted to go sit in the jungle and be like her. I would lose myself in the photos of space and dive in the ocean with Jacques Cousteau. I would crawl down into the earth with the stories about insects and their habits. And volcanoes! Who knew, at that time, that I would live in Hawai’i for a while and get to walk on newly cooled lava and then watch red hot lava flow into the ocean? My love of science owes a debt of gratitude to NatGeo for the visual imagery and stories they brought to me.

In high school, I was part of the “advanced track.” This meant that I had double periods of math and double periods of science every year. Double periods of math! I was invited to be part of the school’s Math League team. I hardly noticed that there were only two girls on the team. Double periods of science meant lots and lots of labs. Let’s just say that having a lab partner who sutured our fetal pig back together each night should give you a glimpse of the kind of classmates I had. But I also played violin, taught myself guitar, and sang in the choir. I became a thespian and loved drama (apparently, both on stage and off). You see, it was just the beginning of my interest in everything. I owe it to my mom that I always thought that if I was interested in something I could just go out and learn it and do it. So, I just kept doing that.

I graduated from high school early. In part, because of a dare/challenge. There were three of us who thought it would be great to graduate early (no idea why we thought that at first). The school told us “No, you can’t do that. It isn’t allowed, it’s never been done.” Hmmpff. That’s one of the surest ways to get me to try to make something happen. So, we looked at the specific policies and rules in place, and found a loophole that would allow us to graduate in three years (by doubling up on some coursework). We appealed to the school board, and they agreed. We were the first to do that. It also meant that I was in the graduating class of female students who were first invited to apply to West Point. I didn’t go to West Point, or any of the other amazing opportunities I was offered. Instead, my education and career “trajectory” began to look more like I was tacking in a sailboat.

The short story is Life and Family (capital L and F) became priorities for various reasons. The result is that along the way I got married, had 2 daughters (both awesome), had my 2 youngest sisters come into our house under our guardianship, had my other sister live with us for a time while she finished her undergrad degree, ran several entrepreneurial endeavors, learned a lot of new things, and moved a lot.

Tell us a little more about your career trajectory so far: interesting projects past and present? And future?

Trajectory assumes a smooth path that obeys the law of gravity and as I’ve already noted, my journey has taken a rather torturous, meandering route. But (and please forgive me for this), as Tolkien’s oft-quoted poem says: “Not all those who wander are lost.”

While meandering, I hiked and backpacked all 46 of the Adirondack High Peaks (becoming an ADK46er along with my husband and our 2 daughters). I have taught physics to high school students, undergrads, & grad students. I did research with cadavers to help develop a tibia index to make more biofidelic crash test dummies. I coded. I studied (and taught) ancient languages and their writing systems, like Ugaritic, Aramaic, Biblical Hebrew, and Babylonian. I studied Tolkien linguistics (and created a Tengwar Primer). I created miniature medieval calligraphy pieces (with period techniques for pigments and gilding). Less academic, I taught myself how to make molds of my own ears so I could design elf ear prosthetics. Yes, really.

I coached a cross country team. I bicycled a few century rides. I went to South Sudan to help train teachers whose lives had been disrupted by decades of war. I studied in Stellenbosch, South Africa. I taught English during some summers in Hungary. I took students on week-long sailing trips in the Bahamas. I worked at the Museum of Life and Science (Durham, NC) with the Animal Department—lemurs and snakes and bears, oh my!

And, then my life also took a turn back to Space. I’ve been to several NASATweetups (now called NASAsocials) where I was able to meet people like Bill Nye and Neil deGrasse Tyson (& amazing NASA people) while we watched rockets launch missions to the moon and Mars. My name is on a chip on the Mars Curiosity rover! I absolutely love how NASA has re-invented itself in the public eye.

Eventually, all the experiences and education came together in a kind of perfect storm that led me to Bora and Anton and ScienceOnline.

What is taking up the most of your time and passion these days? What are your goals?

ScienceOnline! It’s an amazing privilege to represent the ScienceOnline community and work to build the projects, tools, and resources that create the opportunities for conversation, community, and collaborations. I’m so grateful for my friendship with Bora and Anton and for their trust in me and their encouragement to take the momentum from the last 7 years of conferences and move forward, as an organization, in new and exciting directions.

We have topical events (ScienceOnline: Oceans; ScienceOnline: Climate and more) being developed. Regional events around the world are springing up. Tools and resources (such as ScienceSeeker are being developed. And then, of course there are the logistics of a new organization to work on.

I think the distinctives that characterize our events are our focus on conversation and relationships. There are many valuable science conferences and associations that are more presentation focused, but we prioritize face-to-face meetings between people who have met or work together online so that they can build relationships which will lead to new collaborations and better science communication.

What aspect of science communication and/or particular use of the Web in science interests you the most? You are obviously a veteran blogger. And you’ve been using Twitter for at least two years longer than I have. What platforms and what types of online activity you found most useful, or most gratifying to use? How does blogging figure in your work? How about social networks, e.g., Twitter, Google Plus and Facebook? Do you find all this online activity to be a net positive (or even a necessity) in what you do? What new platforms or method of online communication, if any, are you excited about?

I don’t blog as much as used to, or as much as I would like. My current personal blog is stay-curious.com and I still have all these ideas, but a lack of time. I’ve been writing for ScienceOnline (organization documents, grants, policy, copy for projects, etc) but it’s not the same! I miss having time to introduce people to aspects of the world they live in that they may not have noticed.

Twitter has been a wonderful way to stay involved online with content creation when I don’t have the time to do long blog posts. I think the various social media platforms are invaluable for data acquisition, data sharing, data analysis, science outreach, professional development, community, and communication. I like to explore ways to exploit the tools in ways their creators never imagined. A good example of this is how Fraser Cain (of Universe Today) took the Google+ hangouts to a completely new level with virtual star parties. I don’t think the Google developers ever dreamed that telescopes would stream live images of distant worlds into our homes via G+ hangouts. This excites me for the future because there are tools we haven’t even created yet and new ways of sharing information and community still to discover.

I’m most excited about the platforms we have yet to create.

I can’t imagine not being online. But I do sometimes need to unplug (albeit briefly). I love to get out in nature to hike, explore, collect small things. I like to be alone. I like to think. I’m training for the Rocketman Triathlon which will have the bicycle portion go through the launchpads at Kennedy Space Center! Oh, and I’ll be doing the triathlon with Camilla Corona, the NASA mascot for the Solar Dynamics Observatory (SDO). She’s a rubber chicken. After that, I’m looking forward to exploring Alaska in May.

What is the best aspect of ScienceOnline for you, now that you are the Executive Director? How is it different from when you were just an attending participant?

Well, I’m an introvert (amazing how many of the attendees seem to claim this trait). It has become much easier to talk to people because they all know who I am now. It is harder for me to remember all the new people though! I have some ideas for next year to help with this (but I’m not telling yet!)

I love the creative details that I’ve been able to bring to life at the conferences, but I’m so excited to be thinking big picture, to draw in all my previous experiences/skills and work to enable others to bring out their own potential and skill.

I’ve been most surprised by the opportunities to mentor. I guess I keep thinking “Who am I to give counsel or advice? I’m still growing up!” But apparently, I guess I have lived a fair bit and done a few things and it may be helpful to a handful. So, yes, I do enjoy encouraging and listening to some of the members of our community who have come to me in that way.

I know you always have surprises for all of us – including some that even Anton and I don’t know about until the conference starts! Is there one of those little surprises that you are willing to reveal in advance, right now?

I do love to surprise and delight people. At tweetups I often bring toys (as you know!) to give people something fun to try out and play with. For the conference(s), I try to think of ideas to keep it fresh, to make it fun, to make people more likely to think creatively. I work hard at cultivating an atmosphere that allows conversation. Sometimes breaking down the “professional” barriers by playing with some origami or LEGO blocks at a table helps people to interact in a more casual and engaging way.

What does the future hold?

If I knew that, do you think I would tell you? All I can say is that I’m always ready for an adventure.

Thank you so much! It is exciting to see ScienceOnline move into the new future under your leadership.

 


ScienceOnline2012 – interview with Matthew Francis

Every year I ask some of the attendees of the ScienceOnline conferences to tell me (and my readers) more about themselves, their careers, current projects and their views on the use of the Web in science, science education or science communication. So now we continue with the participants of ScienceOnline2012. See all the interviews in this series here.

Today my guest is Matthew Francis (blog, Twitter).

Welcome to A Blog Around The Clock. Would you, please, tell my readers a little bit more about yourself?

”]”]I’m a physicist, freelance science writer, former college professor, ex-planetarium director, and wearer of jaunty hats. (And yes, that’s part of my standard biography.) I hold a Ph.D. in physics and astronomy from Rutgers University, and my undergraduate degree is from Central College, a small liberal arts college in Iowa. While I majored in physics, my minors were in math and English.

Tell us a little more about your career trajectory so far: interesting projects past and present?

As you can tell from the “former” and “ex-” in the paragraph above, my career has followed an unpredictable trajectory. I fully expected to retire from teaching at a college, but when my university faced serious financial troubles, they decided to eliminate the physics department. However, I’ve always loved writing, so I decided to see if losing my job could be turned into an opportunity. In my last year of teaching, I began a blog, “Galileo’s Pendulum“, and in the last six months started writing a book. I am also contributing physics editor for “Double X Science“, a blog aimed at providing good science content for and about women.

“Galileo’s Pendulum” covers a variety of topics in physics, astronomy, and related fields, mostly for non-scientists. I try to mix some lessons about how science works in practice into my writing as much as possible, since it’s an area of common misconceptions. In particular, as a theoretical physicist, I try to emphasize the importance of evidence in all aspects of science, since it’s too commonly assumed that coming up with “theories” is a matter of sitting alone in a room and thinking hard. Real science is far messier and more glorious than that – and there’s romance even in the messiness.

A similar theme plays in my book-in-progress, which is tentatively titled Back Roads, Dark Skies: a Cosmological Journey. For this book, I am traveling to various observatories and labs across the United States where the real work of cosmology is done, meeting scientists and viewing the equipment they use. Cosmology is big science: many projects involve hundreds of researchers, and the ways they go about learning about the Universe are as important as their discoveries. After all, the most important question one can ask in science is, “How do we know?”

What aspect of science communication and/or particular use of the Web in science interests you the most?

I still think of myself as an educator even now, though I’m no longer in the college classroom. I want to share the wonder of physics to those who think of it as something beyond them, or even something to fear. In this era when the very goals of education are being challenged (at least for the children of poor and working-class families), it seems more important than ever to stress the importance of science, not just in daily lives, but in our intellectual structure. Science can be a source of joy and wonder for everyone, whether they are scientists or not.

The Web and social networking allow me to connect with those who are truly interested in finding what I write. My audience isn’t huge, but it’s pretty diverse: I have people from Iran and clergy from Wisconsin, a few kids, and even a handful of professional physicists among my readers. I don’t think that would even be possible without the Web. Twitter is really my community, since I haven’t identified any other professional science writers in Richmond (yet at least). My best professional contacts in the last two years have come through Twitter, including the entire ScienceOnline community.

When and how did you first discover science blogs? What are some of your favourites? Have you discovered any cool science blogs by the participants at the Conference?

I started reading Sean Carroll’s “Preposterous Universe” website many years ago, but the first science blog I followed in earnest was Phil Plait’s “Bad Astronomy”, thanks to his earlier website debunking the Moon landing conspiracy nonsense. (For those joining late: a small but vocal group of people deny we ever landed astronauts on the Moon, and have a long list of “evidence” to support this view. Even if you don’t believe the testimonies of the people involved in the projects, the evidence in favor of the Moon landings is really strong, and Plait has done a really good job collecting it and debunking the conspiracy theorists.) Through his site, I discovered Carl Zimmer’s “The Loom”, Ed Yong’s “Not Exactly Rocket Science”, Jennifer Ouellette’s “Cocktail Party Physics”, and Sean Carroll’s later blog, “Cosmic Variance”.

I hesitate to even begin listing the blogs and writers I learned about through ScienceOnline, since there are so many! Suffice to say nearly every science writer I follow on a regular basis is part of that community, and many of the others I learned about through my friends in the ScienceOnline extended family.

What was the best aspect of ScienceOnline2012 for you? Any suggestions for next year? Is there anything that happened at this Conference – a session, something someone said or did or wrote – that will change the way you think about science communication, or something that you will take with you to your job, blog-reading and blog-writing?

I loved the chance to meet my online friends in real life, and interact with them in a structured but still informal setting. A lot of the best professional connections were actually out of the sessions: talking with people about what they do, and how. The session that inspired me the most was the “Geometry and Music” session led by Deborah Blum and David Dobbs: using geometry (which I use extensively in research) and music (which I am obsessed with) to recognize shapes within narratives in your own stories.

My first ScienceOnline was 2012, and I had the privilege of leading a session, despite my newbie status. I hope to be leading at least one session in 2013 as well (hint, hint).

Thank you so much – hope to see you soon!

 

The Scienceblogging Weekly (August 26th, 2012)

The week was too busy to finish this on Friday. Then on Saturday the news broke that Neil Armstrong died – something I wanted to highlight as a special topic – so I decided to wait another day and give people a chance to wrote posts and articles about Neil. So, with a delay, the weekly linkfest is here!

 

Blog of the Week:

We are all in the gutter is a an astronomy and astrophysics group blog. The title of the blog comes from the quote “We are all in the gutter, but some of us are looking at the stars.” from Lady Windermere’s Fan by Oscar Wilde. Emma, Niall, Rita and Stuart are astronomers, astrophysicists, star-gazers and space geeks at various career stages, having fun with their blog, exploring the universe from every angle they can possibly think of.

 

Top 10:

Unless They’re Zombies, Fossils Don’t Live by Brian Switek:

I hate the phrase “living fossil.” The term should be eradicated from the vocabulary of science writers, and anyone who employs it should be promptly encased in Carbonite. “Missing link” is the only slogan that pisses me off more. My acute allergic reaction to the idiom may be a little overwrought, I admit. But, to me, “living fossil” is nonsense that obscures more than it elucidates. Take the coelacanth, for example….

Hyenas Eschew Lent, Chew Donkeys Instead by Anne-Marie Hodge:

Anyone who has ever attended a holiday parade or gone on a summer vacation knows that cultures tend to create their own seasonal patterns. In much of Western culture, December is a time of much celebrating and feasting, while similarly wintry January is relatively dreary and dull (after New Year’s celebrations subside). This raises a question: how do the behaviors and culture of a society affect the animals that depend upon that society’s garbage for their food? The progressive encroachment of human settlements into the habitats of wild animals has opened opportunities for animals to avail themselves of human refuse. A raccoon in North America is likely to find a juicy watermelon rind in July and leftover turkey remains in November. Perhaps equally enticing for a roving dumpster-diver, but by no means nutritionally equivalent….

Why Is the Night Sky Turning Red? by Amy Shira Teitel:

The idea of a red sky at night used to invoke beautiful images of vibrant sunsets, the product of warm sunlight bathing the sky near the horizon. The adage of “red sky at night, sailor’s delight” refers to a calm night ahead; a red sunset suggests a high-pressure system in the west is bringing calm weather. But red skies at night have taken on a new meaning in recent decades. As outdoor lighting become increasingly prominent, our night skies are gradually turning from black to red….

When will we find life in space? by Phil Plait:

One of the reasons I love astronomy is that it doesn’t flinch from the big questions. And one of the biggest is: are we alone? Another reason I love astronomy: it has a good shot at answering this question…

Paleo-politics: The really long view by Will Femia:

…..The other explanation is that the Cretaceous ended when, 65 million years ago, an asteroid (or asteroids) slammed into the earth, right across the future-Gulf of Mexico at the tip of the Yucatan Peninsula. Not only did the impact and resulting fallout from that asteroid kill the dinosaurs, it also wiped out huge quantities of marine life, including many of the “tiny marine plankton with carbonate skeletons” (I’m guessing some version of Coccolithophore? Anyone?) that would become the rich soil that slaves would farm on land their ancestors would inhabit in voting districts that would favor Democratic candidates around the turn of the second millennium of the Common Era……

What the Dark Knight knows about holding our urban lives together by Scott Huler:

There’s a lot not to love about The Dark Knight Rises, the crazyish new chapter in the latest Batman cycle: a series of actions and explosions so unconnected that they make a Rorschach test look like a syllogism by comparison; Marion Cotillard’s death scene, which lacked only her eyes rolling up and her tongue lolling sideways from her mouth to equal those put on by toddlers on playgrounds; and Christian Bale’s Batman growl — close your eyes and you think Cookie Monster is saving Gotham City….One thing the movie got right, though, is its focus on the infrastructure systems that serve as the beating and vulnerable heart of our urban existence. Every major plot point directly relates to the built environment and the networks that make every element of our lives possible….

Science For Princesses by Janet Stemwedel:

I have always known that I loved science, that delicious alliance of imagination and methodical testing that could help you figure out something about how a piece of the world worked. However, being born at the tail-end of the 1960s, I grew up in a culture that wanted me to know that girls were not supposed to like science. In fact, between toy commercials and TV shows, teachers and peers, I got the message pretty quickly that science is not something for girls. Rather, girls should turn their attention to more important matters . . . like being properly feminine. There was a way that girls were supposed to be—neat and tidy and pretty and pink and quiet and well-behaved. I was not any of those things. I didn’t want to be any of those things. I didn’t know how to be any of those things. And, as far as I could tell, trying to be those things was not going to help me get my hands on the science-y stuff that I wanted. So what was the point?….

How to Annoy E.O. Wilson by Michelle Nijhuis:

…….During a panel at the Aspen Environment Forum in Colorado, as she describes here, Emma piqued Wilson with her talk of making more nature — of expanding our definition of the natural world to include places humans have invaded, altered, and restored. Spending billions trying to return coastal areas like the Everglades to pre-Columbian “purity,” she added, is a lost cause. Better to invest in upslope reserves, and perhaps even learn to admire the tenacity of invasive species…..

Father’s age dictates rate of new mutations by Virginia Hughes:

With every passing year, men are increasingly likely to transmit new mutations to their children, according to the largest study yet of the so-called paternal age effect, published yesterday in Nature. The findings could help explain why older men are more likely to have a child with autism or schizophrenia than are younger men, the researchers say….

I Am Science…and a Nerd by Craig McClain:

I am a nerd. I was a nerd. I will be a nerd. Perhaps in kindergarten I wasn’t, where nerdom had difficulty establishing itself among the simple lessons of the alphabet, counting, and colors. In kindergarten, we are more or less the same in deficiencies and achievements. But after that, I am pretty confident my geek flag flew. I cannot remember ever being a bad student. Repeated straight A’s and the honor role defined me….

 

Special topic 1: Neil Armstrong

Neil Armstrong’s message to the future by Amy Shira Teitel

Neil Armstrong: Ace Engineer and Hotshot Test Pilot by Amy Shira Teitel

Neil Armstrong’s legacy went to waste but a new space race is on the cards by Alok Jha

Neil Armstrong: 1930 – 2012 by Phil Plait

Pow! ZOOM! To the Moon! by Phil Plait

Debunking myths about Neil Armstrong by James Oberg

Rocks remember, and so do we by Ethan Siegel

What Neil Armstrong Knew Is What We Never Will by Charles P. Pierce

Keep in mind as you put together your Neil Armstrong packages tonight… by Charles Apple

The Man and the Moon by Anthony Lane

As We Say Goodbye to Neil Armstrong, Should We Also Let Go of Our Space Fantasies? by John Horgan

For Neil Armstrong, the First Moon Walker, It Was All about Landing the Eagle by Andrew Chaikin

Neil Armstrong by Babbage

Neil Armstrong Talks About The First Moon Walk by Robert Krulwich

Neil Armstrong by Neil Gaiman

Neil Armstrong’s Last Interview by Jeff Marlow

RIP Neil Armstrong, star of the first big story of my news career by Steve Buttry

The Cold War Push Behind Neil Armstrong’s ‘One Small Step’ by Andrew C. Revkin

Rest in Peace, Neil Armstrong by Matthew Francis

 

Special topic 2: rape and pregnancy

Rep. Todd Akin (R-MO) serves on House Committee on Science, Space, and Technology by David Kroll

Here is Some Legitimate Science on Pregnancy and Rape and What Do You Do When There is No Best Dataset? A follow-up on pregnancy and rape statistics by Kate Clancy

The sperm don’t care how they got there, Rep. Akin by Emily Willingham

Sure, women cannot get pregnant from rape. Also, all mean people are ugly and puppies are immortal. by Melanie Tannenbaum

Legitimate rape, seminal priming, and preeclampsia by Jon Wilkins

Unfamiliar sperm, Tibetans, and cheese: Why evolutionary biology doesn’t excuse Todd Akin by Jeremy Yoder

What people who talk about “legitimate rape” really mean by Naomi McAuliffe

Todd Akin and the Anti-Science House Science Committee by Brandon Keim

‘Legitimate rape’ – a medieval medical concept by Vanessa Heggie

Backstory: the reporter who interviewed Akin by Mike Hoyt

A letter to Paul Ryan about forcible rape by Dr. Jen Gunter

Pregnancy Flowchart by Adam Weinstein

Hard words: Do we know what we’re talking about when we talk about rape? by Kathryn Blaze Carlson

The Crackpot Caucus by Timothy Egan

Why Sex Education Helps End Rape by Erica Grigg

Akin breakin’ science by Phil Plait

It’s trigger warning week by Laurie Penny

Rape exceptions aren’t legitimate by Irin Carmon

Where Akin got the idea that rape victims rarely get pregnant by Tim Townsend and Blythe Bernhard

An Open Letter to Rep. Akin From a Woman Who Got Pregnant From Rape by Shauna Prewitt

Todd Akin’s Abortion Position Reflects GOP Platform by Laura Bassett

Conservative Media Dismiss Akin “Rape” Comments As “Dumb,” But Rhetoric Is Reflected In GOP Policies by MIKE BURNS & SOLANGE UWIMANA

The Problem With Men Explaining Things by Rebecca Solnit

Todd Akin and the Right’s False Fact Machine by Josh Barro

Words and deeds by David Wescott

Rep. Todd Akin’s statements have a familiar ring to them… by Sassquach

Legitimate takedown: Todd Akin meets the women of the Internet by Virginia Heffernan

A Canard That Will Not Die: ‘Legitimate Rape’ Doesn’t Cause Pregnancy by Garance Franke-Ruta

The Official Guide to Legitimate Rape by Katie J.M. Baker

Todd Akin’s “Legitimate Rape” Comment Was Not a Misstatement. It Was a Worldview. by Laura Helmuth

Rep. Todd Akin’s Rape Remark At Odds With Science Of Pregnancy by Jeanna Bryner

What Does Todd Akin Think “Legitimate Rape” Is? by Amy Davidson

 

Special topic 3: superbug at NIH

The “NIH Superbug”: This Is Happening Every Day by Maryn McKenna

Genome detectives unravel spread of stealthy bacteria in a hospital by Ed Yong

Not a failure, a lesson. The NIH Clinical Center KPC Outbreak by Eli Perencevich

The NIH Superbug Story—a Missing Piece by Judy Stone

Hunting a Superbug by Deborah Blum

‘Superbug’ stalked NIH hospital last year, killing six by Brian Vastag

NIH should have notified it of superbug outbreak, Montgomery County official says by Brian Vastag

Like a Game of Clue, Genomics Tracks Outbreak, Revealing Evolution in Action by Ricki Lewis

Genome Detectives Solve a Hospital’s Deadly Outbreak by Gina Kolata

Govt. Gene Sleuths Stop Superbug That Killed 6 by The Associated Press

 

Best Images:

Drake equation: How many alien civilizations exist? by IIBStudio

Sunday Morning Anole Cartoon: When Lizard Biologists Compete by Rich Glor

If you were to summarise the world into 100 people, how would the population turn out? by Charlie Hilton

Conventional Wisdom by Randy Yeip

Are those pictures of Mars from the Curiosity rover? by Is Twitter Wrong?

Miss Insomnia Tulip’s Anatomical Macaroons by AnatomyUK

Votive Ear by Jai Virdi

Glow-in-the-dark cockroaches look like Jawas by Jess Zimmerman

London Zoo animal audit – in pictures by The Guardian

Animals in the News by Alan Taylor

 

Best Videos:

How Did Apollo-era Astronauts Sleep in Space? and Learning to Land on the Moon by Amy Shira Teitel

Amazing Color Differences In Lizard Populations Separated By Little Distance by Jonathan Losos

Can dinosaurs still be badass with feathers? by Charlie Jane Anders

Camera shutter speed synchronized with helicopter blade frequency by whataboutlarry1

Why Insect Wings Don’t Fracture by Sid Perkins

The High-Resolution Life of a Neuron by Brandon Keim

Curiosity Drops in on Mars in High-Res by JPLnews

Doodling in Math Class: Connecting Dots by Vi Hart

Jessica Wise: How fiction can change reality by TEDEducation

Learning By Play by Nadja Popovich

 

Science:

Three Ways of Looking at the Great Pacific Garbage Patch by Miriam Goldstein

Thomas Kuhn: the man who changed the way the world looked at science by John Naughton

Kuhn the Irrationalist by Peter Coles

A brief history on how I became an Animal Behaviourist… by Kate Mornement

How Domed Dinosaurs Grew Up by Brian Switek

Microbes manipulate your mind by Mo Costandi

Kissing bug – the real vampire of Latin America by Samantha Price

Is solidarity a thing of the past? by Kurt Cobb

No, immunology should get the same scrutiny as psychiatry. And vice versa. by Tim Skellet

So, you’ve dropped a vial or lost a sample box in your liquid nitrogen container…now what? by Brian Krueger

Breeder by Melissa Wilson-Sayres

‘Beam Us Up, Mr. Scott!’: Why Misquotations Catch On by Maria Konnikova

Superbug Summer Books: EXPERIMENT ELEVEN by Maryn McKenna

Chemical Free Dirt (for the Fairytale Garden) and Smoked Out and No, no. Not Nicholas Kristof on Chemicals Again by Deborah Blum

Why are languages so different—and disorderly? by Philip Ball

Aphids, carotenoids and photosynthesis by Ian Le Guillou

Do Be a Dick (sometimes): Emotions and Skeptics by Ashley F. Miller

Tesla’s Revenge: Filmmakers Kickstart Electrifying Docudrama About Cult Genius by Hugh Hart

The neurology of Psalm 137 by Vaughan Bell

Book review: Connectome by Sebastian Seung by Moheb Costandi

TGIPF: Penis in My Head by Christie Aschwanden

First US stem cell trial for autistic children launches today by Kathleen Raven

Stem cell clinical trial for autism: proceed with caution by Emily Willingham

Is a trial of stem cell therapy in autism scientifically and ethically justified? by Orac

Would Rachel Carson Embrace ‘Frankenfoods’? – This Scientist Believes ‘Yes’ by Pamela Ronald

Debunking the Hunter-Gatherer Workout by Herman Pontzer

Morality and Basketball by Sean Carroll

Republican spending plan casts shadow on science by Amy Maxmen

Making Liquor Recommendations by Dr24hours

Richard Dawkins in Playboy by Faye Flam

Amateur Scientists Discover Asian Needle Ant Has Expanded its Range by Thousands of Miles, Unnoticed by Rob Dunn

Dogs Chasing Their Tails Are Akin to Humans With OCD and Celebrating 1,447 Years of the Loch Ness Monster and Go to Sleep, All-Nighter Cram Fests Don’t Work and Want to Avoid a Mid-Life Crisis? Get Friends and Crafty Bonobo Shows Humans Aren’t the Only Stone Tool-Makers by Rachel Nuwer

Asperger’s Doesn’t Make You an Asshole by Heina

Bodies in art, art in bodies by John Hawks

NASA’s Amazing Gliding Gemini Capsules by Amy Shira Teitel

Can Identical Twins Get Away With Murder? by Brian Palmer

What can survive on Mars? by Steven A. Edwards

How to Learn a Language Nobody Speaks and Lance Armstrong Surrenders Against Doping Charges and Will be Banned for Life by Rose Eveleth

Rockstars, Ethograms and Behavior (Problems) by Julie Hecht

Planetary alignment pyramid scheme by Phil Plait

We Can Save the World by Eating Bugs and Drinking Urine by Erin Biba

Clothes Make the Man—Literally and The Neuroscience of Optimism by Jordan Gaines

Wasps Follow Order of Succession When Queen Dies and The Shambulance: Zero-Calorie Noodles? by Elizabeth Preston

Friday Weird Science: This quail has a cloth fetish by Scicurious

Vowel Movement: How Americans near the Great Lakes are radically changing the sound of English. by Rob Mifsud

How to Teach a Horse the Rules of the Road by Miriam Kramer

Remnants of a stellar suicide pact and The Terrible, Horrible, No Good, Very Bad Scientific Talk by Matthew Francis

Helium-Breathing Gibbons Sing Like Human Sopranos by Tanya Lewis

Siberian Princess reveals her 2,500 year old tattoos by The Siberian Times reporter

The birthplace of English? by Tim De Chant

Anti-Terrorism Campaigns and the Criminalization of Public Non-Conformity by Gwen Sharp

Hormones Explain Why Girls Like Dolls & Boys Like Trucks by Natalie Wolchover

The Nature of Consciousness: How the Internet Could Learn to Feel by Steve Paulson

New Morbid Terminology: Coffin Birth by Katy Meyers

Are You a Hero or a Bystander? by Sue Shellenbarger

Invasive species provide important lessons for surviving climate change and New species of barbet discovered in Peru by GrrlScientist

Just how big were dinosaurs? by Dave Hone

How Plantain Trees Could Become an Energy Source by Rhitu Chatterjee

Night Thoughts of a Classical Physicist by Ann Finkbeiner

WWWTP? Time’s Aspirin Structure Causes Headache by See Arr Oh

Candidates clam up on climate by Curtis Brainard

Overlooked and Underfoot: Sidewalk Cleaning in New York City by Ashley Taylor

Spawning coral monitored for effects of climate change by Melissa Gaskill

10 Myths About Space Travel That Make Science Fiction Better by Charlie Jane Anders

Goo-eating snakes and the eggs that evade them by Andrew Durso

Bonobo Stone Tales: The Making Of A Story by Charles Choi

Replacement Parts and Newly discovered rat that can’t gnaw or chew by Ed Yong

Artist Patricia Olynyk inspired by light pollution by Casey Rentz

Scoop: A preview of Romney’s energy plan by Philip Bump

Neuroscience: Solving The Hard-On Problem by Neuroskeptic

Every Step You Take by Wendy Lovelady

Fighting the stereotype that math is only for boys by Patricia Valoy

The Wall Street Journal Does It Again: Another Whopper Of A Lie On Climate Science by Dana Nucitelli

It’s all about objective multiples… by Mia Cobb

Medieval Women as Physicians by Tracy Barrett

Was Vincent van Gogh Color Blind? It Sure Looks Like It by Colin Schultz

Ego v. Efficiency at the U.S. National Science Board by Jeffrey Mervis

The Science of Bad Neuroscience by Neurobonkers

Social Position Drives Gene Regulation of the Immune System by Daniel Lende

Q&A: Alexandra Cousteau by Emily Fisher

The evolutionary history of dragons, illustrated by a scientist by Annalee Newitz

Egg-ceptionally Bad by Cassandra Willyard

The Free Will Confusion (1): On “My Brain Made Me Do It!” by Stephan Schleim

Should we teach algebra? by Paul Raeburn

The Rats of War: Konrad Lorenz and the Anthropic Shift by Liam Heneghan

Why College Binge Drinkers Are Happier, Have High Status by Maia Szalavitz

How many species are there? by Zen Faulkes

 

Media, Publishing, Technology and Society:

How to Succeed in Journalism when You Can’t Afford an Internship by Alexandra Kimball

Who are the offline-academics? by Katie Wheat

Sick of Impact Factors: Coda by Stephen Curry

Taking the Impact Factor seriously is similar to taking creationism, homeopathy or divining seriously by Bjoern Brembs

There are cons to open acces? Really? by Bjoern Brembs

“You’re not entitled to your own facts” vs. That’s your opinion. Kiss my ad. by Jay Rosen

Twitter rewrites the script for political conventions by Martha T. Moore

Barbara Mack: best media lawyer I ever worked with by Steve Buttry

Ask A Writer: “How Do I Write What The Audience Wants To Read?” by Chuck Wendig

The End of My Writing Career / Author Sharon Potts by Clay Stafford

Research As You Go by Steven Johnson

The ridiculous SVP embargo is back again by Ross Mounce

Intellectual power and responsibility in an age of superstars by Daniel W. Drezner

Coming in the side door: The value of homepages is shifting from traffic-driver to brand by Adrienne LaFrance

Google Hiring Data Reveals Two Things Women Can Do To Get Hired And Promoted More by Nicholas Carlson

A Day In My Life As A Freelance Science Writer by Charles Choi

Turn Off the Phone (and the Tension) by Jenna Wortham

Adulthood, Delayed: What Has the Recession Done to Millennials? by Derek Thompson

Why Are Young People Ditching Cars for Smartphones? by Jordan Weissmann

The Cheapest Generation by Derek Thompson and Jordan Weissmann

How Wikipedia Manages Sources for Breaking News by Heather Ford

Ex-NPR Hill reporter: Lied to daily by Patrick Gavin

Report: Social network demographics in 2012 by Pingdom

6 questions journalists should be able to answer before pitching a story by Tom Huang

Plagiarism, defamation and the power of hyperlinks and The billion-dollar question: What is journalism for? and Why it’s better for fact-checking to be done in public by Mathew Ingram

Rutgers Professor’s Research Shows Social Network Sites Foster Close and Diverse Connections by Lisa Intrabartola

Don’t blame Twitter when journos tweet stupid things; blame stupidity by Steve Buttry

How long-form journalism is getting ‘a new lease of life’ in the digital world by Rachel McAthy

Why fact-checking matters by Emily Willingham

Rotary Dial by Ftrain

The closing of American academia by Sarah Kendzior

Be More Productive. Take Time Off. by Jason Fried

Journalist Of The Day: SciAm’s Bora Zivkovic talks about the evolution of social by Chao Li

 

Blogs of the Week so far:

May 11, 2012: Academic Panhandling
May 18, 2012: Anole Annals
May 25th, 2012: Better Posters
June 1st, 2012: Vintage Space
June 8th, 2012: Tanya Khovanova’s Math Blog
June 15th, 2012: Russlings
June 22nd, 2012: Parasite of the Day
June 29th, 2012: March of the Fossil Penguins
July 6th, 2012: Musings of a Dinosaur
July 13th, 2012: Contagions
July 21th, 2012: Life is short, but snakes are long
July 27th, 2012: Science Decoded
August 11th, 2012: Powered By Osteons
August 18th, 2012: Do you believe in dog?

The Scienceblogging Weekly (August 18th, 2012)

Blog of the Week:

Do you believe in dog? is a brand new blog. It is written by two dog researchers, one in New York City, the other in Yarra Valley just outside of Melbourne, Australia. Julie Hecht you may already know from her wonderful blog Dog Spies, her writing in The Bark, or her research which we covered here at SciAm. She studies (and teaches about) dog cognition. Mia Cobb, the Australian, did her research in animal behavior on birds and ants, but now works on issues of dog shelters, welfare and performance science of working dogs. What is the coolest thing about the blog is that the two of them write for each other, addressing each other in each post, thus teaching and learning from each other in a dialogue to which we are all invited to participate in and contribute.

 

Top 10:

Tales from the OR by Summer Ash:

WARNING: This post contains my blood and guts, literally. If you’re squeamish, I recommend skipping this one. What follows is my journey through the operating room at Columbia-Presbyterian on July 18, 2012. Apologies, but I couldn’t help starting off with yet another pop culture reference (this time from Wes Anderson’s Rushmore)….

An example of why it is important to distinguish evolution as fact, theory, and path. by T. Ryan Gregory:

I, and others, have pointed out that there are three aspects of evolution: evolution as fact, evolution as theory, and evolution as path. Evolution as fact refers to the historical reality that species are related through common ancestry. This is supported by a massive amount of evidence from a wide array of independent sources. Evolution as theory refers to the proposed explanations for how “descent with modification” occurs — mutation, natural selection, genetic drift, etc. Evolution as path refers to the actual patterns that have occurred during the history of life, such as when certain events (e.g., branching points, extinctions, etc.) took place, how lineages are related, when and how many times certain traits evolved, and such. The important point is that these three components are largely independent…

The Childhood Aquatic by John Romano:

There is a structurally integral part of my psyche that is the keystone to my existence. I am not sure how it was placed in such a vital position, but it seems this part of me is embedded in my DNA. Something that I can never remember being without. The absolute and total fascination with the natural world….

Abraham Lincoln and The Embalmer by Romeo Vitelli:

The assassination of Abraham Lincoln on April 15, 1865 shocked a nation still recovering from four years of bloody civil war. Along with the hunt for his killers and the uncovering of the assassination plot against the President and several other members of his administration, there was also the logistic nightmare of his funeral and the need to transport the President’s body by train from Washington D.C. to his final resting place in Springfield, Illinois. Since the funeral train would retrace the route that Lincoln had traveled to Washington following his election, the body would be viewed by millions of mourners along the way during the numerous planned stops. All of which raised the question of how to keep the body preserved long enough to reach its destination. Considering the fact that funeral embalming was a relatively new development at that time, some very special arrangements needed to be made…

Inspiration from bassist Victor Wooten shows me a new way to deal with my “child-as-scientist” frustrations by Marie-Claire Shanahan:

I have a confession to make: I cringe a little every time I see a school science or science outreach program justified by saying something like, “Young children are natural scientists, truly curious about the world” (That particular quote is from the Delaware Museum of Natural History). I feel like a curmudgeon about it because it often comes with really good intentions to get students actively involved in doing science (something I definitely support)….

How a Tick Bite Made Me Allergic to Meat by Helen Chappell:

The last time I ate a hamburger, I spent the night in the emergency room. There wasn’t anything wrong with the hamburger itself—aside from being a bit overdone—but it sent me into anaphylactic shock. It wasn’t always this way…

Are wolves really all that? by DeLene Beeland:

Have conservation scientists become carried away, touting the ecological benefits of wolves where there are perhaps — dare I say it? — not as many as we believe there to be? Perhaps some people in the media, and even some in science, have gotten carried away with the ecological changes that wolves are actually capable of mediating, says globally-renowned wolf biologist L. David Mech in his most recent paper “Is science in danger of sanctifying the wolf?” …

Losing One’s Head: A Frustrating Search for the ‘Truth’ about Decapitation by Lindsey Fitzharris:

If you ever find yourself in a pub with me, chances are that at some point, the conversation will turn to death. Not just death, but the terrifying and horrible ways people have succumbed to it in the past. I have often heard a story retold about a man who attended the execution of his friend during the French Revolution. Seconds after the guillotine fell, the man retrieved the severed head and asked it a series of questions in order to determine whether or not it was possible to retain consciousness after decapitation. Through a system of blinking, the victim allegedly communicated his message back to his friend. The ending to this story changes according to the whims of the narrator… or perhaps the number of drinks he or she has consumed by that time. I wondered: was this the 18th-century equivalent to an urban legend? Or could there, in fact, be a degree of truth in this ghastly tale?….

A Dirty, Deadly Bite by Brian Switek:

Dragons aren’t real. At least, the fire-breathing wyverns and coiling wyrms of medieval lore aren’t. Those reptilian menaces were products of superstition and pre-scientific ideas about prehistoric creatures. They were ugly amalgamations inspired by our fears and actual fossil remains of long-extinct mammals and dinosaurs. But in the early 20th century, reporters excitedly relayed the discovery of what quickly became known as the Komodo dragon – ten foot long lizards that had coexisted with humans on South Pacific islands for thousands of years, but had only just been recognized by western science….

The Itsy Bitsy Drummer by Helen Shen:

Rrrr… RRR… Thack! Thack! Thrusting his front legs skyward, the male jumping spider shakes his rear end to send thumps, scrapes, and buzzes through the ground. He’s playing for a female’s attention, dazzling her eight eyes with semaphore while drumming out seductive seismic signals. A few missteps could turn the spider’s performance into a dinner show—with the star as the main dish. The ferocious female demands precise choreography, set to a groovy beat that UC Berkeley behavioral ecologist Damian Elias is working to decipher….


Best Images:

On Cephalopods and Science Fiction by Jen Richards

Beautiful periodic table from LIFE magazine’s 1949 special on the atom by Frank Swain

Curiosity’s photos (cartoon) by Viktor Poór

A bacterium on a diatom on an amphipod on a frog on a bump on the log in the hole in the bottom of the sea!<!–

The Spider Wars by bonybones

UNDERCOVER by Jun Takahashi

The Olympics Are Over and Here Are the Best Infographics by Rose Eveleth

They fell out of the sky! by Bill Harding

Elgar’s Explosion by Eva Amsen

Teaching history by Zach Weinersmith

Old Friends by Beatrice the Biologist

Tasting the rainbow: The ants whose multi-coloured abdomens show exactly what they’ve been eating by Mohamed Babu

Anole Raids A Hummingbird Feeder by Karen Morris

Unicorn Blood Parasite by The-Episiarch

Cures of all Kinds by Jai Virdi

 

Best Videos:

The GMO Song: “OMG GMOs!” by Andrew Bean, David Holmes, Sharon Shattuck, and Krishnan Vasudevan

Do watch this – probably the best ever debris flow video, from Austria last week by Dave Petley

Tricky Mister! Indirect Sperm Transfer in Primitive Hexapods by The Bug Chicks

Helmet Cam Strapped to Hunting Falcon Captures “Birds-Eye-View” Footage by Michael Zhang

Seat vibration test: oscillate the human by Marc Abrahams

Lice on a Bird: Convergent Evolution in action! by Bug Girl

 

Science:

Where Fire Meets the Sea by Tanya Lewis

Curiosity Landing: What’s With All the Peanuts? and Apollo’s Youthful Glow and The Soviets’ First Space ‘Rendezvous’ by Amy Shira Teitel

The benefits of seeing a “challenge” where others see a “threat.” and Why do swimmers hate Lane 8? and The psychology of doping accusations: Which athletes raise the most suspicion? by Melanie Tannenbaum

Could you be an Olympic athlete? by Catherine de Lange

Mysterious Tides: Toxic blooms of marine algae are getting worse, and some think we’re to blame. by Marissa Fessenden

Astrobiology: Worth It? by GunnarDW

Olympics Physics: The Long Jump and Linear Regression by Rhett Allain

Diseases That Just Won’t Quit by Tim Wall

Think Like a Doctor: A Peculiar Heartbeat Solved! by Lisa Sanders

The Bullying Culture of Medical School by Pauline Chen

Two Tales of Symbiosis by Elio Schaechter

Where the Minutes Are Longer: The Weird Science of Telling Time on Mars by Rebecca J. Rosen

Stop Calling Sherlock a Sociopath! Thanks, a Psychologist. by Maria Konnikova

Why cocaine users should learn Bayes’ Theorem by Precocity

Science on crack, 2: Walter White & cooking crystal meth by Puff the Mutant Dragon

We live in a geocentric world! by Thony C.

Murder by Physics by Matthew Francis

In Vietnamese community, treating taboos on cancer by Erin Loury

Years After Slash and Burn, Brazil Haunted by ‘Black Carbon’ and Science Takes Fat Out Of Chocolate, Replaces It With Fruit and Defending a Sanctuary With Paint and Song by Rachel Nuwer

Why We Need Ecological Medicine by Rob Dunn

Is PTSD A Product of War, or Of Our Times? by David Dobbs

A very modern trauma by Vaughan Bell

Curious about Curiosity: the Science Lab on Mars (Part I) and Search for Water (Part II) and Life on Mars (Part III) by Claire.W

Popping up trouble with butter and Alzheimer’s by biochembelle

A New Species Discovered … On Flickr by Adam Cole

Cells = drugs = government regulation? by Ada Ao

On the loss of a mentor: Al Malkinson, lung cancer researcher, scholar, gentleman by David Kroll

The Hidden Power of Whale Poop by Brandon Keim

What do you do when you’re sick? by Jai Virdi

Choice of Wood in Cremation Pyres by Katy Meyers

Food and trust of science and Does a Ph.D. train you to head a lab? by Zen Faulkes

Africa Grows Too Hot to Grow Chocolate by Mollie Bloudoff-Indelicato

Community health workers help HIV patient change attitude, life by Helen Shen

Hyenas Show It’s Better to Be Creative than Try, Try Again and Close Look at Bison DNA Reveals Our Dirty Fingerprints by Elizabeth Preston

CDC: Pretty Much Everyone Is Fat by Maryn McKenna

Why did people start mummifying their dead in the driest place on Earth? by Ed Yong

Found in translation: where do cures come from? by Jenny Rohn

Mouse Eyes Come With Built-In Bird Detectors by Sophie Bushwick

Atop Everest, two Sherpas and a watchmaker forged a friendship that changed their lives by Samantha Larson

Here’s an Omical Tale: Scientists Discover Spreading Suffix by Robert Lee Hotz

Flavors of Uncertainty: The Difference between Denial and Debate by Wendee Holtcamp

Tracks of an Oak Killer by Erin Loury

What is fair in the Olympics? Is sex a special case? and What is DNA? by Genegeek

That Eternal Question by Nicholas Suntzeff

Choosing the Paths Less Traveled? There’s an App for That by Henry Grabar

“Canopy” Meg Lowman (forest ecologist) – podcast by Samantha Larson

Scientific reproducibility, for fun and profit by John Timmer

Good Scientist! You Get a Badge. by Carl Zimmer

Reproducing Scientific Results – On Purpose by Derek Lowe

Common Lab Dye Found to Interrupt Formation of Huntington’s Disease Proteins by Kathleen Raven

No, that’s not a picture of a double sunset on Mars and An unreal Mars skyline by Phil Plait

How to Patch the PhD Problem by Alison McCook

Lead’s Everlasting Legacy by Meghan D. Rosen

Tweeting my genome #twenome and “Run away!”: a one-size-fits-all solution by Alex Brown

The Rise of the Three-Parent Family by Annalee Newitz

The Political Benefits of Taking a Pro-Climate Stand in 2012 by Connie Roser-Renouf, Anthony Leiserowitz, Edward Maibach

The Circadian Advantage: How Sleep Patterns Benefit Certain NFL Teams by David K. Randall

Book Review: Newjack Guarding Sing Sing by Erin Podolak

Dear HigherEd Communicators: John Tesh is Kicking Our Asses by Elizabeth Monier-Williams

When Yellow Fever Came to the Americas by Michelle Ziegler

The Mind of a Flip-Flopper and Cow Week: Angry cows vs. angry mothers by Maggie Koerth-Baker

PhD2.0 and anecdotes from the trenches by Jeanne Garbarino

The Sea Longs for Red Devils by Daniela Hernandez

Cooperating For Selfish Reasons by Miss Behavior

The Mix-Up that Ended the World by Erik Vance

Intimate Life of Mosquitoes by Lowell Goldsmith

What Anti-Trafficking Advocates Can Learn from Sex Workers: The Dynamics of Choice, Circumstance, and Coercion by danah boyd

Confessions of a Fake Scientist by Phil Edwards

Baby, You Light Up My World Like Nobody Else by Rachel Wang

Nothing Says Baby-Makin’ Like Desiccated Bacon and Scientists create a “Dow Jones” for ocean health by Allie Wilkinson

The Evolution of Shark Week, Pop-Culture Leviathan by Ashley Fetters

The Smell of Fear (No Tweets Necessary) by Natalie Angier

Post-Antipsychiatry by The Neurocritic

Where Have All The Cults Gone? and Is Poker A Game of Skill or Luck? by Neuroskeptic

Brain’s Drain: Neuroscientists Discover Cranial Cleansing System by Daisy Yuhas

This Woman Wants You to Buy Her, Piece by Piece by Rose Eveleth

My Brain Made Me Do It: Psychopaths and Free Will and How PTSD and Addiction Can Be Safely Treated Together and Couples Therapy Can Help PTSD and Improve Relationships by Maia Szalavitz

On quack cancer cures, and “alternative medicine” as religion by Xeni Jardin

Scientists can block heroin addiction now? and Offbeat tales: The summer heat takes its toll and Morning wrap-up by Paul Raeburn

How to Put a Curator in a Box: Part 1 and Ask an Exhibitionist #1: What’s the fake water? by Helen Chappell

Sharks and lasers, not just for entertainment! by Craig McClain

Giant cluster phenomenally fertile by Nadia Drake

Emma Marris: In Defense of Everglades Pythons and A Song Tries to Go Beyond the ‘OMG’ Reaction to GMOs by Andrew Revkin

The Emerging Revolution in Game Theory by The Physics arXiv Blog

“A simple feat… only expensive”: The Oatmeal tries saving Tesla’s lab by Casey Johnston

How many colors are really in a rainbow? by Ethan Siegel

Spiders Weave Better on LSD-25 by Clyde

Are Drug Companies Faking an Innovation Crisis? Uh, No. by Derek Lowe

Gorilla Joy Without a Doubt by Marc Bekoff

Turning Trauma Into Story: the Benefits of Journaling by Jordan Gaines

A Lesson in Rocketry by Marie-Claire Shanahan

PhD what is it good for? #leavingacademia by Jerry Nguyen

Contraception, healthcare and the costs women will leave behind by Katie Rogers and Ruth Spencer

The problem with poker by Pete Etchells

Rare Discovery: Hook-Legged Spider Found in Oregon Cave by Douglas Main

Why I’m Working Toward my Ph.D. at a Museum by Alejandro Grajales

How not to criticize psychiatry, part 1 by Tim Skellet

Book Review: The Wolverine Way, by Douglas Chadwick by DeLene Beeland

On Sciences and Humanities: Reflections on Coyne and Konnikova by German Dziebel

Citizen scientists may beat the pros in identifying at-risk species by Kate Shaw

The Long-Lived Legacy of the Cambrian’s “Wonderful Life” by Brian Switek

Bigger and Smaller by Lucy E. Hornstein

Scissor Sisters by Sally Adee

Brain network: social media and the cognitive scientist (pdf) by Tom Stafford and Vaughan Bell

 

Media, Publishing, Technology and Society:

Sick of Impact Factors by Stephen Curry

A smear campaign against Impact Factors…and the Sheep of Science by Drugmonkey

Deep impact: Our manuscript on the consequences of journal rank by Bjoern Brembs

Chess ratings and Impact Factor and Self archiving science is not the solution by Zen Faulkes

On publishing in PLoS One, and what’s the matter with ecology? by C. Titus Brown

Should supreme court justices use Google? by Paul Raeburn

Geneticists eye the potential of arXiv and Neanderthal sex debate highlights benefits of pre-publication by Ewen Callaway

9 ways to find helpful people and organizations to follow on Twitter by Steve Buttry

Instead of a press release: Options to add to your press release diet by Denise Graveline

Jonah Lehrer and the Problems with “Pithy” Science Writing by Karthika Muthukumaraswamy

Using Links as Citations Helps Gizmodo Defeat a Defamation Claim–Redmond v. Gawker Media by Eric Goldman

Discover magazine moving to Wisconsin and Discover magazine update by Paul Raeburn

New! New! New! (not yet) and If I were making a Twitter clone… and Making a Twitter clone, day II by Dave Winer

Magazines Don’t Have a Digital Problem, They Have a Bundling Problem by Hamish McKenzie

Should journalists specialize? by Kallen Dewey Kentner

Science Outreach in North Carolina by Russ Campbell

Stop Publishing Web Pages by Anil Dash

Author Platform Lessons from #1 New York Times Bestseller Rebecca Skloot by Dan Blank

To Think, To Write, To Publish by Maria Delaney

Do We Need Another Information Sharing Platform? by Jalees Rehman

How The American University was Killed, in Five Easy Steps by Debra Leigh Scott

13 ways of looking at Medium, the new blogging/sharing/discovery platform from @ev and Obvious by Joshua Benton

How To Lose Twitter Followers by Neuroskeptic

What to Do With Political Lies by Garance Franke-Ruta

Science Communication in the PhD process by Heather Doran

Science News staffers complain about misappropriation of their copy by UPI and UPI’s second response on misuse of copy by Paul Raeburn

UPI shirks responsibility by Curtis Brainard

News stories that aren’t news by John L. Robinson

Student Paper Editors Quit at University of Georgia by RICHARD PÉREZ-PEÑA

Letter from the Editor in Chief by Polina Marinova

Students walk out on University of Georgia newspaper by Andrew Beaujon

UGA Red & Black staff walks out today in protest. Is it now Red & Dead? by Maureen Downey

Witness describes confrontation between Grady NewSource Reporter and Red & Black Publisher by Grady Newsource

Study: Journalists’ lousy understanding of fair use leads to self-censorship by Andrew Beaujon

Five types of problem writer by Ann Friedman

Jonah Lehrer’s Mistake — And Ours by Peter Sims

Making Studies Out of Nothing at All by Taylor Kubota

On being a journalist, getting quotes by Razib Khan

Mendeley Acquires SciLife, a Social Network for Scientists and Researchers by Darrell Etherington

Nikola Tesla museum campaign earns $500,000 online in two days by Adam Gabbatt

Lessons on the Internet for LAMs from The Oatmeal: Or, Crowdfunding and the Long Geeky Tail by Trevor Owens

Further Decline in Credibility Ratings for Most News Organizations by Pew

The Update by Matt Thompson

Metrics, metrics everywhere: How do we measure the impact of journalism? by Jonathan Stray

Why we are poles apart on climate change and Doing science is different from communicating it — even when the science is the science of science communication by Dan Kahan

Hey, Twitter — shouldn’t it be about the users? by Mathew Ingram

The first steps towards a modern system of scientific publication by Joe Pickrell

Reflections on science blogging by Puff the Mutant Dragon

 

Blogs of the Week so far:

May 11, 2012: Academic Panhandling
May 18, 2012: Anole Annals
May 25th, 2012: Better Posters
June 1st, 2012: Vintage Space
June 8th, 2012: Tanya Khovanova’s Math Blog
June 15th, 2012: Russlings
June 22nd, 2012: Parasite of the Day
June 29th, 2012: March of the Fossil Penguins
July 6th, 2012: Musings of a Dinosaur
July 13th, 2012: Contagions
July 21th, 2012: Life is short, but snakes are long
July 27th, 2012: Science Decoded
August 11th, 2012: Powered By Osteons

The Scienceblogging Weekly (August 11th, 2012)

Blog of the Week:

Kristina Killgrove (Twitter) is a bioarchaeologist. Her blog Powered By Osteons covers a wide spectrum of topics on archaeology, bioanthropology, and the classical world. But what it has the most, and is most exciting, are bones. Lots of bones. Human bones. Skulls and femurs and pelvises and what we can learn about the past from studying them.

 

Top 10:

Satisfying Curiosity: preparing for the Mars landing by John Rennie:

…All the Mars rovers so far, from the trailblazing Sojourner to the overachieving twins Spirit and Opportunity, have been extraordinary exploratory robots, but Curiosity represents an ambitious new extreme. Most obviously, it’s much bigger: Curiosity weighs almost a ton and is the size of a small car, whereas Spirit and Opportunity were half as long and a fifth as massive and Sojourner was not much bigger than a large cat….

Muscles and the Lactic Acid Myth by Larry Moran:

…It’s all a myth. Lactic acid has nothing to do with acidosis (the buildup of acid in the muscles). In fact, it’s not even clear that acidosis is the problem, but let’s deal with that another time….

Is a PhD required for good science writing? by Emily Willingham:

…..In fact, as someone who has a PhD in science but has been a writer longer than I’ve been a scientist, I’d argue that it might be better not to have specific training in science if you’re reaching for an audience of nonscientists, depending on what your goal as a writer is. If your goal is to tell a great science story that keeps the nonscientist reading and thinking, “wow” or “I get it,” then scientific training might be an anti-requisite. If your target is critique and analysis of science, then scientific training could be quite useful as long as you don’t let your deep background blind you to what your readers might not understand as well as you…..

What Grown-Ups Can Learn From Kids’ Books by Maria Konnikova:

….The little prince isn’t alone in carrying insights that are lost on a child. What of Alice in her wonderland and mirrored adventures? Alice’s story may have been born from a tale told to children one lazy afternoon, but it became much more: a deep philosophical meditation….

Olympic Physics: Air Density and Bob Beamon’s Crazy-Awesome Long Jump by Rhett Allain:

Even now, there are those who claim that the long-jump record of 8.9 meters that Bob Beamon set in 1968 was so crazy awesome because he accomplished it in Mexico City, which is almost 8,000 feet above sea level. The argument is that the air is thinner, and so there is less air resistance, and Mexico City is further from the center of the earth, and so the gravitational forces are smaller. Does any of this have any impact? And if so, does it really matter?…

Is corn the new milk? Evolutionarily speaking, that is. by Jeremy Yoder:

It is a widespread misconception that, as we developed the technology to reshape our environment to our preferences, human beings neutralized the power of natural selection. Quite the opposite is true: some of the best-known examples of recent evolutionary change in humans are attributable to technology. People who colonized high-altitude environments were selected for tolerance of low-oxygen conditions in the high Himalayas and Andes; populations that have historically raised cattle for milk evolved the ability to digest milk sugars as adults….

In the Bronx, Rights Get Fuzzy by Cassie Rodenberg:

I’ve been working with photographer Chris Arnade to document stories in Hunts Point, Bronx and often-ignored areas of New York City. Over the course of the last year, we have noticed the impact the city’s Stop and Frisk policy has on the neighborhood. Recently, we made the decision to start documenting that in action should we see it. This Sunday, we did:…

What do Christian fundamentalists have against set theory? by Maggie Koerth-Baker:

I’ve mentioned here before that I went to fundamentalist Christian schools from grade 8 through grade 11. I learned high school biology from a Bob Jones University textbook, watched videos of Ken Ham talking about cryptozoology as extra credit assignments, and my mental database of American history probably includes way more information about great revival movements than yours does. In my experience, when the schools I went to followed actual facts, they did a good job in education. Small class sizes, lots of hands-on, lots of writing, and lots of time spent teaching to learn rather than teaching to a standardized test. But when they decided that the facts were ungodly, things went to crazytown pretty damn quick….

Stop Calling Sherlock a Sociopath! Thanks, a Psychologist. by Maria Konnikova:

I’d like to get something off my chest. It’s been bugging me for a very, very long time. Sherlock Holmes is not a sociopath. He is not even a “high-functioning sociopath,” as the otherwise truly excellent BBC Sherlock has styled him (I take the words straight from Benedict Cumberbatch’s mouth). There. I’ve said it…

What’s the difference between “transparency” and “invisibility”? by Greg Gbur:

In writing my previous post on The Murderer Invisible, I started thinking again about the relationship between something being “transparent” and something being truly “invisible”. Most of us can appreciate that, under the right circumstances, a transparent object like a glass window can be very hard to see, but most of us also appreciate that glass is not even close to fitting the popular perception of invisibility. In fact, though we encounter plenty of transparent things in nature, we don’t encounter invisible things….

 

Special topic: Curiosity:

Mars needs rovers! (and it just got a big one) by Matthew Francis

What Curiosity Will and Won’t Teach Us About Martian Life by Jeffrey L. Bada

A lifetime of curiosity: An interview with JPL director Charles Elachi by Nadia Drake

How Did We Get That Incredible Photo of Curiosity’s Descent on Mars? by Alexis Madrigal

Landing Curiosity on Mars was Way Harder and Way Less Expensive than the Olympics by Rose Eveleth

Watching Curiosity’s Mars Landing Live on a 53-Foot Screen in Times Square by Laura Geggel

Me and Curiosity by Taylor Kubota

“Curiosity” Driven Science by Larry Moran

Long day at the office as scientists get in sync with Mars by Bridie Smith

Curiosity’s first color photo of Mars is only its second-most exciting photograph yet by Robert T. Gonzalez

Meanwhile in Mars…. by Shibin Dinesh

Curiosity Rover: Driving Lessons on Mars by Tamara Krinsky

Engineering Life to Survive on Mars and Aid Human Colonization by Tanya Lewis

http://www.npr.org/blogs/thetwo-way/2012/08/08/158433038/amazingly-earth-like-curiosity-beams-first-full-frame-photo-of-mars by Eyder Peralta

See what it’s like to be a flight controller for Curiosity by Ruth Suehle

SCUBA Diving through the Endless Martian Desert by Thomas Hayden

Poet Laureates of Mars: Meet the NASA Team Behind Curiosity’s Twitter by Benjamin Soloway

 

Best Images:

Mars orbiter catches Curiosity by the tail by Eric Hand

Mars orbiter catches pic of Curiosity on its way down! and Curiosity landing site: the whole mess by Phil Plait

Curiosity Rover’s Home on Mars: A Powers-of-Ten Visual Explainer by Alexis Madrigal

Classic Scientific Illustrations by Ian Wang

Stickleback by Simone

 

Best Videos:

The only existing video footage of Mark Twain, as filmed by Thomas Edison by Robert T. Gonzalez

3D-printed exoskeleton gives a little girl use of her arms by Sean Ludwig

Curiosity’s Descent by JPLnews

Fred Guterl by The Daily Show

Forget Wireless Keyboards and Touch Your Plant Instead by Katie Pratt

The Scienceline music video awards by Kelly Slivka

How Math Comes to Mind: Intuition, Visualization, and Teaching by Stanislas Dehaene and Steven Strogatz

High Speed Video of Flipping Cats by destinws2

Mark Achtman on Plague Genetics by Michelle Ziegler

 

Science:

Superbug Summer Books: THE POWER OF HABIT by Maryn McKenna

Olympic Greatness: Biology or Motivation? by Melanie Tannenbaum

Backpacking Lizards For Science: Radio-Tracking Puerto Rican Anoles by Jonathan Losos

Will Climate Doubt Dry Up with the Drought? by Bob Deans

Undead: The Rabies Virus Remains a Medical Mystery by Monica Murphy and Bill Wasik

In Antarctica, Dreaming of Mars by Alexander Kumar

How to Unstick a Gecko and Mom’s Genes Make Males Die Sooner by Elizabeth Preston

Laboratory dye repurposed against protein clumps found in Huntington’s disease by Kathleen Raven

Stress Is a Real Killer—for Dragonflies by Douglas Main

Only Young Scientists Overthrow Old Concepts? and What Does “pH” Mean? by Larry Moran

Award-winning teacher Michael Lampert: WHY I LOVE SCIENCE by Casey Rentz

Sandpipers forgo sleep for days because there’s too much sex to be had and Prisoners pitch in to save endangered butterfly and A circuit for aggression in the brains of angry birds by Ed Yong

The Largest Waves in the Sea Aren’t at the Beach by Kim Martini

Plants with Personality by Emily Anthes

What’s up with social psychology? by Thom Baguley

The Molecular Olympics by Stuart Cantrill

Free online tool helps identify bat calls by Mark Kinver

New Forensics Tool for Catching Elephant Poachers and Man Wears Artificial Uterus for Science & His Wife and Celebrating 80 Years of LEGO by Rachel Nuwer

Historiography of the Market for Health by Jaipreet Virdi

Sleep research reveals keys to health by Lydialyle Gibson

Olympic Diving Physics by Paige Brown

Apollo 15’s Bizarre Contraband Stamp Debacle and How NASA Engineered the Enduring Apollo Flags by Amy Shira Teitel

Explaining Risk: Know Your Aristotle by Trisha Greenhalgh

Species Traits and Community Assembly by Jacquelyn Gill

First-Ever National Survey on Genetically Engineered Mosquitoes Shows Mixed Support by Matt Shipman

A Cult of Quantity by Will

Nope, these birds are not lesbians by Annalee Newitz

The Spruce Street Swamps by David H.

Psychology and Its Discontents by Carol Tavris

The Kangaroo’s Tale: How an errant elevator door ended an odd form of popular entertainment by Jack El-Hai

Ehux: The Little Eukaryote with a Big History by Jaime E. Zlamal

A New Generation of “Digital Ornithologists” by Abby McBride

The story behind “Scaling Metagenome Assembly with Probabilistic de Bruijn Graphs” by C. Titus Brown

What Lurks In Logs by Carl Zimmer

The Sham Ph.D. by Dave G Mumby

In Defense of Algebra by Nicholas Warner

A Mysterious “Alien” Creature Identified by NC Museum Researchers by jasoncryan

Fear of a Black Hole by Matthew Francis

Skeletons in the Closet by Heather Pringle

Serbian entity in Bosnia and Herzegovina pledges to revolutionise its “unsatisfactory” science by Mićo Tatalović

TGIPF: Slug Sex Redux by Cassandra Willyard

Anorexia nervosa, neurobiology, and family-based treatment by Harriet Brown

Ten clues to the modern poisoner by Deborah Blum

Cheetah Sets New Land Speed Record, Beats Bolt by 4 Seconds by Tanya Lewis

Science settles some decades-old debates about the best way to swim by Michael Ann Dobbs

Seven climate-change diseases to ruin your day by James West

Anolis sagrei (Cuban Brown Anole) in Valdosta, Georgia! 04 August 2012 by Janson Jones

Stiletto snakes by Andrew Durso

 

Media, Publishing, Technology and Society:

Judge Posner: Embedding Infringing Videos Is Not Copyright Infringement, And Neither Is Watching Them by Mike Masnick

Everything That’s Wrong with Political Journalism in One Washington Post Item by Jay Rosen

Scientific Communication As Sequential Art by Bret Victor

How to Write a Malcolm Gladwell Book by Zach Weiner

Where peer-review went wrong and Some more of peer-review’s greatest mistakes and What is this peer-review process anyway? by Mike Taylor

Chipping away at “hard” — for the poets and What has podcasting accomplished? by Dave Winer

Oracles, Big Answers, & Pop Sci’s Neglect of Mystery by David Dobbs

Journalism at the speed of bytes – a timely report by Lawrie Zion

Advice and examples on how and what journalists should tweet by Steve Buttry

PeerJ: are we reinventing the wheel? by Eduardo Santos

Blogging about blogging, and tweeting about tweeting: what I have learnt after 100 tweets by Michael McCarthy

Whither Science Publishing? by Bob Grant

Beware, Tech Abandoners. People Without Facebook Accounts Are ‘Suspicious.’ by Kashmir Hill

Downgrading Facebook. Tech Abandoner? Or Rational Lifestyle Choice? by Haydn Shaughnessy

Security Questions: The Biggest Joke in Online Identity Verification by Rebecca J. Rosen

All in a Single String by Maria Konnikova

Who’s That Woman In The Twitter Bot Profile? by Jason Feifer

Why Cartoons, sex and music are necessary in science communication by Emily Coren

Social Media for the Physiologist – A Modern Utopia or a Brave New World? by Dr. Isis with contributions from Danielle Lee, Pascale Lane, and Kristy Meyer

An Unexpected Ass Kicking and 7 Things I Learned From My Encounter With Russell Kirsch by Joel Runyon

Enter an Elevator with Confidence by Heather R.

Evidence-based, informative and on YouTube? How to communicate science in the Internet age by Dorothy Bishop

The Future of the Internet is…a la Carte by Matt Shipman

If #Google Plus is “Deserted” I Hope It Stays That Way by Tinu Abayomi-Paul

The false-balance trap by Paul Raeburn

Cheating in Online Courses by Dan Ariely

There’s only one truly open platform — the web by Mathew Ingram

The balance trap by Natasha Loder

Knit Together by Mindy Weisberger

 

Blogs of the Week so far:

May 11, 2012: Academic Panhandling
May 18, 2012: Anole Annals
May 25th, 2012: Better Posters
June 1st, 2012: Vintage Space
June 8th, 2012: Tanya Khovanova’s Math Blog
June 15th, 2012: Russlings
June 22nd, 2012: Parasite of the Day
June 29th, 2012: March of the Fossil Penguins
July 6th, 2012: Musings of a Dinosaur
July 13th, 2012: Contagions
July 21th, 2012: Life is short, but snakes are long
July 27th, 2012: Science Decoded

The Scienceblogging Weekly (August 4th, 2012)

Blog of the Week:

Beatrice the Biologist says this about itself: it is “part science blog, part comic, and part incoherent rambling: science edutainment at its finest.” Written – or rather drawn – by Katie McKissick, each post is a visual delight and will make you chuckle…and learn.

 

Top 10:

Gavin’s Story: Whole Exome Sequencing Finds Mystery Mutation by Ricki Lewis:

In a hotel ballroom on the campus of the University of Pennsylvania on a midsummer Saturday in 2010, an unusual roll call was under way at the Family Conference for the Foundation for Retinal Research. Betsy Brint, co-head of organization, was calling out what sounded like code words – CEP290, GUCY20, LRAT – and for each one, a few people would stand up, excited, then form little groups. After all 18 abbreviations had been called, representing the genes known to cause Leber congenital amaurosis (LCA), a few sets of parents were left standing. Troy and Jennifer Stevens, of Chino, California, were among those whose childrens’ genes and mutations were still a mystery….

Alain de Botton Tries Hand at Sex, Fails by AV Flox:

…..The next sections jump into “evolutionary-biological interpretation,” which we took to mean science, and which gave us the distinct impression that the author’s research of sex stopped at the work of William H. Masters and Virginia E. Johnson instead of starting there. That’s not surprising, though. ….

Even Deadly Snakes and Monkey Shit Couldn’t Stop Me From Excavating Maya Ruins in the Jungle by Charles Choi:

Snakes. In the ancient Maya ruins where I’m working at with archaeologists, the creatures we fear most are probably the snakes. That fact might sound like the punchline to an Indiana Jones joke, until you hear about the most dreaded serpent here in the jungles of Belize. The fer-de-lance is likely the deadliest snake in Latin America, packing an amputate-if-you’re-lucky bite if it goes untreated. Its long fangs can go right through a boot, and it’s aggressive – unlike many snakes that seem more afraid of us than we are of them, the fer-de-lance won’t hesitate to strike. ….

The importance of being Aquaman, or how to save the Atlantean from his briny fate by Andrew Thaler:

….There’s no way around it. Even with the huge amounts of heat Aquaman would produce as he burned through his daily 48,000 Calories, he is going to get cold. With little body fat and no fur to speak of, his heat retention potential is pitiful. Fortunately, there are plenty of simple solutions to the thermal problem. Unfortunately, almost all of them involve visible changes to his physique….

Moths, Memory, and Motivation by James Hathaway:

….We quickly found out that something that seemed simple – catching a bunch of pretty colored insects and putting them in boxes – was actually demanding and nearly endlessly complex and mysterious. A lot of the butterflies that were the coolest, the rarest, the most beautiful, lived in strange places – treetops, the edges of swamps and streams, sunlit clearings in deep woods – and only flew in certain seasons and specific times of the day – early spring, late afternoon. We learned why – mating rituals, foodplant availability, lifecycle requirements. We didn’t just read, we observed. We learned that the books were not always right – insects are really variable and behave differently in different locales. We developed hypotheses, collected information that supported or contradicted them. We learned, at least concerning a couple dozen species of butterflies in the part of upstate New York where we lived, how nature worked. Nature taught us the science we needed to use, and science taught us what there was to know. (Not that we knew enough to call it “science, “ of course.) It was like the world had opened up. ….

Pain Control by Shara Yurkiewicz:

She had only been in the hospital twice in her life: once when she was nine and now, 60 years later. She had gotten tonsils out then. She was getting tumors out now. Her abdomen hurt when she was awake. Her abdomen would also hurt during exploratory surgery, although she wouldn’t be able to feel it under general anesthesia. Her body would feel it, though, and could respond by dangerously spiking or plunging her vitals. She needed an epidural before surgery to keep the pain under control…..

Bad Chemistry by Deborah Blum:

The start of the story is this: In December 2008, a 23-year-old research assistant named Sheri Sangji accidentally set herself on fire while working in a chemistry laboratory at the University of California, Los Angeles. She died 18 days later in a hospital burn unit….

Is Childhood Pertussis Vaccine Less Effective Than We Thought? by Maryn McKenna:

Delicately and cautiously, health authorities in the United States and other countries are beginning to open up a difficult topic: Whether the extraordinary ongoing epidemic of whooping cough, the worst in more than 50 years, may be due in part to unexpected poor performance by the vaccine meant to prevent the disease….

Meet the people who keep your lights on and Blackout: What’s wrong with the American grid by Maggie Koerth-Baker:

Power was restored today in India, where more than 600 million people had been living without electricity for two days. That’s good news, but it’s left many Americans wondering whether our own electric grid is vulnerable. Here’s the good news: The North American electric grid is not likely to crash in the kind of catastrophic way we’ve just seen in India. I’m currently interviewing scientists about the weaknesses in our system and what’s being done to fix them and will have more on that for you tomorrow or Friday….

New OCD Symptom: Tail Chasing by Elizabeth Preston:

…Dogs with compulsion may pace, chase imaginary flies, or lick their flanks until they get sores, despite their owners’ best efforts to make them stop. Certain breeds are especially vulnerable. A staple of canine compulsion is tail chasing, which frequently strikes bull terriers and German shepherds. On one forum, user MatrixsDad complains that his German shepherd “is constantly chasing and barking at her tail…She comes up and puts her backside against anyone who’s standing around so she can get a better view of her tail before she starts chasing it.”…

 

Special topic 1: Jonah Lehrer

Jonah Lehrer’s Deceptions by Michael C. Moynihan

Jonah Lehrer Resigns From The New Yorker After Making Up Dylan Quotes for His Book by JULIE BOSMAN

The deception ratchet by Bradley Voytek

Jonah Lehrer, Bob Dylan, and journalistic unquotations and More unquotations from the New Yorker by Mark Liberman

Neuroscience author resigns from The New Yorker after admitting to fabricating Dylan quotes. by Paul Raeburn

Jonah Lehrer’s Grievous Oraculism by Ta-Nehisi Coates

Jonah Lehrer throws it all away by Roxane Gay

How we decide (to falsify). by Janet D. Stemwedel

Original thoughts? by Eva Amsen

Can cheaters repent? by Christie Aschwanden

Jonah Lehrer debacle lesson: Do your homework by Randy Lewis

‘It’s hard to start at the top,’ says Sharon Waxman of Jonah Lehrer by Steve Myers

What Jonah Lehrer reveals about popular science writing by Daniel Bor

Jonah Lehrer Turned His Back On Science by Khalil A. Cassimally

15 Minutes of Meaning for Jonah Lehrer by Alexis Madrigal

Why I Still Really Like Jonah Lehrer by J.S. Adams

On Bob Dylan And Jonah Lehrer, Two Fabulists by Ann Powers

Jonah Lehrer’s missing compass by Seth Mnookin

 

Special topic 2: Algebra

Abandoning Algebra Is Not the Answer by Evelyn Lamb

Does mathematics have a place in higher education? by Cathy O’Neil

When Andrew Hacker asks “Is Algebra Necessary?”, why doesn’t he just ask “Is High School Necessary?” by Rob Knop

Yes, algebra is necessary by Daniel Willingham

Why Algebra Matters (and Why Andrew Hacker is Off-Target) by RiShawn Biddle

“Is Algebra Necessary?” Are You High? by Blake Stacey

A modest proposal by PZ Myers

Algebra Is Necessary, But What About How It’s Taught? by Melanie Tannenbaum

It’s Not the Algebra, It’s the Arithmetic by Mike the Mad Biologist

On Algebra, High Expectations, and the Common Core by Dana Goldstein

The end of algebra by Alexandra Petri

Mathematical Illiteracy in the NYT by Mark C. Chu-Carroll

In Defense of Algebra by Evelyn Lamb

Scientific American Math Doc Defends Algebra Ed by Steve Mirsky

Why We Need m(x)+b: A Response to “Is Algebra Necessary?” by Erik Kimel

 

Best Images:

Macro photographs of snails and insects in the rain by Vadim Trunov

An ant that protects herself with… um… butt foam and More hanging larvae by Alex Wild

URI Sci Comms Day with Bora Zivkovic by Katie, PhD

Teaching Molecular Biology with Watercolors by Rachel Nuwer

Could a Whale-Powered Bus Be the Future of Transportation? by Rachel Nuwer

Hypogean Wildstyle: Dominik Strzelec’s Byzantine Geology by Paul Prudence

Quite Possibly the Cutest (Accurate) Dinosaur Illustration Ever by Annalee Newitz

 

Best Videos:

Watch 131 Years of Global Warming in 26 Seconds by Climate Central

Women in science … on television?!? Evidently not by Emily Willingham

Is There Life On Mars? by KPCC

Ben Goldacre at TEDMED 2012 by TEDMED

London Plague of 1665 by Michelle Ziegler

Field Biology: setting and baiting traps by DNLee

Twitter Algorithm Predicts When You’ll Get Sick (8 Days In Advance, With 90% Accuracy) [STUDY] by Shea Bennett

Curiosity (the New Mars Rover) Explained by phdcomics

100 Gallons: Reflections From A Nation Powered By Water by Powering A Nation

Best Anole Documentary Ever by Jonathan Losos

Sight by Eran May-raz and Daniel Lazo

How Did Apollo Astronauts Learn to Land on the Moon? by Amy Shira Teitel

 

Science:

Antibodies found in Peruvians suggest natural resistance to rabies in local vampire bats and NIH emerges with new emergency medicine research hub by Kathleen Raven

What’s next for scientific teaching? by Zen Faulkes

Deep-sea squid can break off all its arms onto an enemy by Ed Yong

Catching Fraud: Simonsohn Says and Why Don’t Social Scientists Want To Be Read? and Social Science and Language, Again and DSM-5 R.I.P? by Neuroskeptic

If You Compare Yourself With Michael Phelps, Will You Become A Better Swimmer? and We Won. They Lost. by Melanie Tannenbaum

A trustworthy guide to black hole astronomy by Matthew Francis

Velcro Hairs Allow Ants to Hang Their Larvae by Alex Wild

I, For One, Welcome Our New Fishy Overlords by Ian O’Neill

Is this study the bane of crypto-zoologists? by Esther Inglis-Arkell

Vacation Adventure: The La Brea Tar Pits by Erin Podolak

Are climate sceptics more likely to be conspiracy theorists? by Adam Corner

Michael Phelps, Losing the 400IM, and His Taper by Daniel Lende

What Is the Nocebo Effect? by Joseph Stromberg

Why do women leave science? by Zinemin

Muller is still rubbish by William M. Connolley

Breakthrough: The First Complete Computer Model of a Living Organism by George Dvorsky

How The Fukushima Exclusion Zone Shows Us What Comes After The Anthropocene by Colin Schultz

Interdisciplinarity, Heritability, and Public Policy by Kris Hardies

Why Dogs Chase Laser Beams (and Why It Can Drive Them Nuts) by Natalie Wolchover

The Hunter Hunted: Searching for the Body of an Anatomist by Lindsey Fitzharris

The Devil’s Technology by Ross Chapman

Lives of the Deaf by Jaipreet Virdi

Clouding the Olympic issue, China style by Claire

I want to ration your health care by PalMD

Galápagos Redux: When Is It OK to Kill Goats? by Virginia Hughes, Michelle Nijhuis and Jason G. Goldman

Broken heartland: The looming collapse of agriculture on the Great Plains by Wil S. Hylton

Why Experts are Almost Always Wrong by Rose Eveleth

Work-Life Balance for Whom? by Athene Donald

Stiletto snakes by Andrew Durso

New Lights to Help ISS Astronauts Stay Alert by Liat Clark

The Vomit-Inducing Gemini 8 Mission and NASA’s Manned Grand Tour of the Inner Planets by Amy Shira Teitel

Artificial Beginnings: Understanding the Origin of Life by Recreating It by Eric Sawyer

To know a tiger is at least to start tolerating them, study shows and Tigers, people, and finding ways for both to thrive by Sue Nichols

Higgs Discovery: Personal Reflections by Matt Strassler

Did Gymnast Jordyn Wieber Perform Too Soon? In Olympic scoring, the last shall be first. by Karla Starr

Chop Like A Girl by Michelle Nijhuis

Curiosity readies for dramatic entrance and Mission control before the party and Curiosity to look for habitable environs by Nadia Drake

Why is Pluto not a planet? by Tristan Avella

Once upon a time: The possible story of viruses by Audrey Richard

How to pronounce “Muller’s Ratchet” by Jon Wilkins

The evolution of music by James Gaines

Sex testing and the Olympics: myths, rumours and confirmation bias by Vanessa Heggie

Light Pollution’s Potentially Harmful Effects Highlighted In New Film by Lynne Peoples

Taking the scenic route by Kelly Slivka

wesome Harry Potter Fan Decodes Wizarding Genetics: It’s All About Trinucleotide Repeats by Susana Polo

How the Elephant Makes Its Rumble by Veronique Greenwood

Swiss sheep to be outfitted to cry ‘wolf’ by text message by Agence France-Presse

TGIPF: Sex When You Can’t Hang On by Erik Vance

Human cycles: History as science by Laura Spinney

A HOT topic in transit by Taylor Kubota

Stiletto snakes by Andrew Durso

 

Media, Publishing, Technology and Society:

Imagining a ‘World Without Patents’… by Mark Summerfield

Five years as a science blogger – my experiences and how it began by Stephan Schleim

9 Reasons Why Running A Science Blog Is Good For You by Julio Peironcely

Top ten tips for blogging for scientists by Paul Knoepfler

The art and craft of science blogging by Daniel Blustein

Science Reporting Gone Wrong by Paige Brown

Reddit as a Science Outreach Tool by Brian Kahn

Setting Sail Toward a Science Communications Career by Liz Neeley

Journalists slow the environmental debate by Mari Kildahl

The journalistic method: Making the jump from science to journalism by Jessica Morrison

Does journalistic ‘balance’ hurt America? by Trudy Lieberman

The missing millions of Kibera and Kidnapped at birth and Grandma Obama’s support for domestic violence by Martin Robbins

#riscweet! How to Effectively Communicate Science on the Web by Viet Le

A New Age for Truth by Craig Silverman

Big data is our generation’s civil rights issue, and we don’t know it by Alistair Croll

 

Blogs of the Week so far:

May 11, 2012: Academic Panhandling
May 18, 2012: Anole Annals
May 25th, 2012: Better Posters
June 1st, 2012: Vintage Space
June 8th, 2012: Tanya Khovanova’s Math Blog
June 15th, 2012: Russlings
June 22nd, 2012: Parasite of the Day
June 29th, 2012: March of the Fossil Penguins
July 6th, 2012: Musings of a Dinosaur
July 13th, 2012: Contagions
July 21th, 2012: Life is short, but snakes are long
July 27th, 2012: Science Decoded

The Scienceblogging Weekly (July 27th, 2012)

Blog of the Week:

Science Decoded is a wonderful mix of science, book reviews, and thoughts about the media, written by Erin Podolak, alumna of the University of Wisconsin program for Science Journalism, and now a science writer for The Dana-Farber Cancer Institute.

 

Top 10:

A Killer Without Regret by Deborah Blum:

In the summer of 1920, a 29-year-old son of Minnesota farmers docked his boat (acquired with stolen money) at a small island in New York City’s East River. One by one he hired out-of-work sailors to crew for him. And one by one, he shot them in the head with a Colt .45 and dumped their bodies in the water. Before he was executed in 1930, Carl Panzram put the sailor body tally at 10 although he estimated that was only about half his total murder count. “For all these things, I am not in the least sorry,” he wrote in a jail house confessional. “I was so full of hate that there was no room in me for such feelings as love, pity, kindness or honor or decency.”…

The marathon & Olympic movement on Huffington Post by Greg Downey:

Many people think they know the story of the very first ‘marathon.’ Pheidippides, reputedly the fastest man in the Greek army, allegedly ran from the battlefield at Marathon twenty-five miles to Athens in 490 BCE to announce a Greek victory over the invading Persians. Bolting into the Athenian assembly, he shouted, νικωμεν (nikomen), ‘We have won!’ and promptly keeled over dead….

Galápagos Monday: The People Problem by Virginia Hughes:

…Two-thirds of the jobs on the islands are in the service sector. The tourists come, of course, because of the amazing plants and animals. They contribute money directly to conservation efforts, and their patronage boots the economy and allows the government to set up its own conservation management systems. That’s all great, except — more people also means more: ships, construction, roads, vehicles, hotels, restaurants, water and energy use, garbage, and sewage. All of that threatens the habitats and health of the plants and animals. In other words, the whole thing is unsustainable. The growing economy in the Galápagos is simultaneously supporting more science and conservation efforts and destroying the things that need to be studied and conserved. The economy is eating itself….

Geometry Proves Sheep Are Selfish Jerks by Elizabeth Preston:

Sometimes what looks like friendly behavior is really an attempt to get one’s neighbor eaten by a wolf before oneself. Sheep, for instance, seem cozy enough in their flocks. What’s a better way to travel than surrounded by 100 percent merino? But the real reason they stick close to their neighbors is to save their own woolly rear ends…

Noisy sex means death for flies if bats are listening by Ed Yong:

Some folks just can’t help being loud in bed, but noisy liaisons can lead to a swift death… at least for a housefly. In a German cowshed, Natterer’s bats eavesdrop on mating flies, homing in on their distinctive sexual buzzes….

Wisconsin frac sand sites double by Kate Prengaman:

Tucked behind a hill in rural Trempealeau County, farmland undergoes an industrial transformation. Outside this city of 1,300, Preferred Sands turns Wisconsin’s sandy soil into a hot commodity. A wall of green trees opens to a vast expanse of sand buzzing with activity. Excavators mine and conveyors carry the sand from towering stockpiles up into the processing plant. Every week, this facility ships 7,500 tons of sand by rail to oil and gas fields in Texas, North Dakota and Pennsylvania. …

Language Serves the Group by Edmund Blair Bolles:

Steven Pinker has posted an important essay on group selection. You can gather its thesis from the title, “The False Allure of Group Selection.” Since I am on record saying that group selection (really, multilevel selection) was critical to the evolution of language, I read the essay with strong interest. Let me say right off that I was astonished to find that the essay makes no remarks about the evolution of language. Pinker is a famous proponent of language’s evolutionary origins and biological basis, but he says nothing of group selection and language. Instead he criticizes ideas that group selection explains religion, culture, and nations. I am skeptical of those claims too. Pinker is a fine writer and I got several chuckles out of his examination of various shallow appeals to group selection. Was I laughing at my own doom?…

Ending the AIDS epidemic by John Rennie:

Thirty-one years into the HIV epidemic, health authorities are finally starting to sound hopeful about the prospects for curbing it. If that sentence sounds bitter or sarcastic, it isn’t meant to be. Rather, it’s an honest assessment of how long and frequently depressing the era of HIV and AIDS has been, and of how much misery it has spawned. But it also acknowledges reasons to think that maybe, just maybe that’s beginning to change….

Ending U.S. chimpanzee laboratories will save chimpanzee research by Brian Hare:

…The non-lab research model has now become the dominant research model. In my area of research a collection of just five zoos and African sanctuaries recently published more scientific papers in higher impact journals than all five active U.S. chimpanzee laboratories. These non-lab researchers contributed data relevant to fighting HIV, Malaria, Parkinson’s, Autism, Alzheimer’s, and a myriad of other human ailments. They did this while studying chimpanzees that live life freely in extremely enriched environments. …

One way to successfully invade a habitat: eat the competition by Jeremy Yoder:

The Asian Harlequin ladybug, Harmonia axyridis, eats aphids like they’re Popplers, and it’s been repeatedly introduced into the U.S. and Europe to do exactly that. But since it was first introduced, H. axyridis has spread of its own accord, and displaced native ladybugs. This isn’t just because the Harlequin ladybug eats more aphids, or breeds faster, than the locals; it looks like part of the Harlequin’s success is due to the fact that it eats its native competition….

 

Special topic: Sally Ride

American Astronaut Sally Ride Dies at 61 by John Matson

Remembering Sally Ride by Nadia Drake

Sally Ride’s Astronaut Class Completely Changed NASA’s Demographics by Amy Shira Teitel

What Sally Ride Did For STEM Education by Austin Carr

Sally Ride’s Space Flight Was Not Exactly A Great Moment for Feminism by Laura Helmuth

The Women Who Would Have Been Sally Ride by Alexis Madrigal

Rest in peace, Sally Ride by Matthew Francis

First Female U.S. Astronaut, Sally Ride, Comes Out In Obituary by Chris Geidner

Sally Ride by The AstroDyke

Why Aren’t There Any Openly Gay Astronauts? by Natalie Wolchover

Thank you, Sally Ride by Meg Urry

 

Best Images:

Sketching at the American Museum of Natural History by Marissa Fessenden

Manatees by Jen Richards

Sunday Morning Anole Cartoon by Rich Glor

Anole Photo Of The Day by Jonathan Losos

Sharks, Art, and Conservation by Heather Goldstone

Dapper Days in China by peacay

 

Best Videos:

MIT video models airports most likely to spread diseases by Kathleen Raven

Leprosy Facts: Ancient Disease Still In Our Midst by Cara Santa Maria

The Art of Hatching by Allison DeVan

Bear Cam: Watch Brown Bears Catch Salmon in Alaska by Tanya Lewis

Why Whales are Weird by Joy Reidenberg

Ask Jay Rosen Anything: What Does Political Journalism Get Wrong? Get Right? by Andrew Sullivan

Olympicene – Periodic Table of Videos by periodicvideos

 

Science:

Science on crack: the chemistry of illegal drugs, 1 by Puff the Mutant Dragon

The International AIDS Conference Returns: So Much Still To Do by Maryn McKenna

“We took a rat apart and rebuilt it as a jellyfish.” and Aging termites put on suicide backpacks full of chemical weapons by Ed Yong

How Do You Choke Away the British Open? The Science of the Tight Collar by David Dobbs

A Brief History of the Eustachian Tube and The Catheter by Jaipreet Virdi

The Secret Life of Western Corn Rootworm Beetles by James Hamblin

Soccer’s Big Data Revolution by Khalil A. Cassimally

FDA advisory panel looks positively on new eye drug by Kathleen Raven

Autism Outreach on Wheels: Students Design Mobile Clinic for A.J. Drexel Autism Institute by Rachel Ewing

Batman Movies Don’t Kill. But They’re Friendly to the Concept. and Batman Returns: How Culture Shapes Muddle Into Madness by David Dobbs

Inside the Minds of Mass Killers by Daniel Lende

How Urban Parks Enhance Your Brain by Eric Jaffe

World’s Coolest Animal Bridges and Should Dolphins and Whales Have Human Rights? by Rachel Nuwer

How Aldous Huxley, 118 Today, Predicted the Present Far More Accurately than George Orwell and Mapping Afghanistan’s Geology from Really, Really Far Away by Rose Eveleth

There is no greenhouse effect by Robert Grumbine

And Finally the Hounding Duck Can Rest by Carl Zimmer

What’s next for scientific teaching? by Zen Faulkes

Speciation in Bears by Larry Moran

Scientists make curing HIV a priority by Erin Loury

New Study Suggests Humans, Not Climate, Killed Off Neanderthals by Colin Schultz

When Bad Theories Happen to Good Scientists by Matt Ridley

Lemurs Most Threatened Mammals on the Planet by Karl Leif Bates

A year of anarchy in science by Michael Brooks

The Secrets of Geek Mating Rituals by Annalee Newitz

On Leaving Academia by Terran Lane

How Not to Counsel Smokers by Lucy E. Hornstein

The Colorado shooting suspect: how “smart?” by David Kroll

Why don’t we consume dairy products from mammals that aren’t cows? by Benjamin Phelan

Can Sleep Deprivation Cause Psychotic Behaviour? by Romeo Vitelli

Is Mythology Like Facebook? by John Bohannon

Crossing valleys in fitness landscapes by Bjørn Østman

How NFL and NBA cheerleaders and citizen scientists came together. by Darlene Cavalier

Unraveling the left brain/right brain theory by Amanda Mascarelli

The Aurora Shootings and The Mean World Syndrome by David Ropeik

What is this “Mass Spectrometer”? by Penny Higgins

Shark Teeth Have Built-In Toothpaste by Jennifer Viegas

Meet the Skeptics: Why Some Doubt Biomedical Models – and What it Takes to Win Them Over by Kristin Sainani

The Stoneflies: Old or New? by Christopher Taylor

Wrong for the Right Reasons by Matthew Martyniuk

Search Trends Reveal Sexual Seasons and A Case Study in Voodoo Genetics by Neuroskeptic

The brewer’s yoke, the domestication of microbes by A Schooner of Science

The horrible truth about Spiderman’s Anatomy by Bug Girl

Nixon’s Contingency Plan for a Failed Apollo 11 by Amy Shira Teitel

Once an Archaeologist…? Plan B Careers in Archaeology by Becky Wragg Sykes

Diagnosing the Killer in Colorado by Deborah Blum

Olympic Physics: Tennis and Olympic Physics: Diving by Matt Shipman

It Takes an 8-Year-Old to Outsmart a Crow by Elizabeth Preston

Why You Can’t Fake A Good Horn by Carl Zimmer

“The Redder the Better” . . . Sometimes by Anne-Marie Hodge

Exploring the Mind of the Mountain Gorilla by Kimberly Gerson

Cuts loom for US science by Ivan Semeniuk & Helen Thompson

Skepticism And The Second Enlightenment by Kyle Hill

Greenland Melt Was Predicted In Advance By Paper Awaiting Publication by Dan Satterfield

Drought hurts shipping industry, raises prices by Mollie Bloudoff-Indelicato

Olympic Pseudoscience by Steven Novella

Velcro Hairs Allow Ants to Hang Their Larvae by Alex Wild

Circadian Rhythms: Our Eyes, Our Rhythms by Anita Slomski

Scientists in North Carolina will take close look at ants from Chicago by Jessica M. Morrison

DIYBio: Placenta Stem Cells for Research and More by Ada Ao

Beginnings – three simple words by Pete Etchells

Why climate change doesn’t spark moral outrage, and how it could by David Roberts

TGIPF: The Bed Bug and His Violent Penis by Brooke Borel

 

Media, Publishing, Technology and Society:

The Making of PeerJ and Open Science, SciBarCamp and Les Horribles Cernettes by Graham Steel

Thomas Friedman’s Lessons for Anthropologists by Daniel Lende and Greg Downey

ABC News: armchair psychologist: The network offers irresponsible speculation about the Colorado shooter by Curtis Brainard

How We Play Today by Jamie Rosenberg and George Myers

Anatomy of a Zombie Lie… by Tom Levenson

Grief in the Age of Social Media by Callie Schweitzer

A Self-Made Man Looks At How He Made It by John Scalzi

Another science startup that’s changing how research is done. An interview with Elizabeth Iorns of Science Exchange. by William Gunn

If you email it, they will comment and No Comment? by Ethan Perlstein

Blogging expertise by Zen Faulkes

Explaining the news through song: A personal case study by David Holmes

Taming the Impact Factor by Iddo Friedberg

The dark side of data by Mike Loukides

The Death Of SEO: The Rise of Social, PR, And Real Content by Ken Krogue

Blogging, Tweeting, and Other Digital Activities: A Beginner’s Guide to the Internet for Early-career Scholars by Melinda Baldwin

Enduring lessons from being fired 20 years ago by Steve Buttry

Social Media and the Science Classroom, a Twitter Discussion by Michele Arduengo

What Users do with PLOS ONE Papers by Martin Fenner

The Great Sieve: This Is What Browsing Scientific Research Looks Like by Rebecca J. Rosen

Content Factor: A Measure of a Journal’s Contribution to Knowledge by Joseph Bernstein and Chancellor F. Gray

Meet Lena Groeger: @ProPublica’s newest news app developer by Elizabeth R. Miller

Who should see what when? Three principles for personalized news by Jonathan Stray

Predicting the growth of PLoS ONE by Najko Jahn

UK government will enforce open access to development research by Alok Jha

Who’s Talking About ScienceOnline? Interactive Map Of 1000 #Scio13 Twitterers by Mary Canady

An open Twitter-like ecosystem by Dave Winer

A new era for the Nature Network blogs by Lou Woodley

Why a high Google rank is becoming ‘worthless’ by Brad Shorr

BuzzFeed’s strategy by Chris Dixon

ScienceOnline Project Postcard by Karyn Traphagen

Bunch of Fives – Why Blogging is Great, and Tips for Starting by Suzi Gage

How BuzzFeed wants to reinvent wire stories for social media by Justin Ellis

The State of Educational Blogging in 2012 by Sue Waters

How journalists can do a better job of correcting errors on social media by Craig Silverman

Sharing stories with sources before publication is risky, but can improve accuracy and To show or not to show? by Steve Buttry

Quantifying impact: A better metric for measuring journalism by Greg Linch

Going paperless: eliminate stacks of paper by converting paper magazine subscriptions to digital subscriptions by Jamie Todd Rubin

Are You Reading These 17 Science Blogs? You Should by Julio Peironcely

No credit for Uncle Sam in creating Net? Vint Cerf disagrees by Charles Cooper

They Didn’t Build That by Paul Krugman

So, who really did invent the Internet? by Michael Hiltzik

WSJ mangles history to argue government didn’t launch the Internet by Timothy B. Lee

 

=================

Blogs of the Week so far:

May 11, 2012: Academic Panhandling
May 18, 2012: Anole Annals
May 25th, 2012: Better Posters
June 1st, 2012: Vintage Space
June 8th, 2012: Tanya Khovanova’s Math Blog
June 15th, 2012: Russlings
June 22nd, 2012: Parasite of the Day
June 29th, 2012: March of the Fossil Penguins
July 6th, 2012: Musings of a Dinosaur
July 13th, 2012: Contagions
July 21th, 2012: Life is short, but snakes are long

The Scienceblogging Weekly (July 21th, 2012)

Blog of the Week:

Life is short, but snakes are long is written by Andrew Durso who is a PhD student at Utah State University, where he studies the behavior, physiology, and ecology of toad-eating snakes. So, everything on his blog is about snakes. And every post on his blog has something about snakes that you have not known before.

 

Top 10:

Global Warming’s Terrifying New Math by Bill McKibben:

If the pictures of those towering wildfires in Colorado haven’t convinced you, or the size of your AC bill this summer, here are some hard numbers about climate change: June broke or tied 3,215 high-temperature records across the United States. That followed the warmest May on record for the Northern Hemisphere – the 327th consecutive month in which the temperature of the entire globe exceeded the 20th-century average, the odds of which occurring by simple chance were 3.7 x 10-99, a number considerably larger than the number of stars in the universe…

The Mystery of the Missing Chromosome (With A Special Guest Appearance from Facebook Creationists) by Carl Zimmer:

There’s something fascinating about our chromosomes. We have 23 pairs. Chimpanzees and gorillas, our closest living relatives, have 24. If you come to these facts cold, you might think this represented an existential crisis for evolutionary biologists. If we do indeed descend from a common ancestor with great apes, then our ancestors must have lost a pair after our lineage branched off, some six million years ago. How on Earth could we just give up an entire chromosome….

Are Warnings About the Side Effects of Drugs Making Us Sick? by Steve Silberman

Your doctor doesn’t like what’s going on with your blood pressure. You’ve been taking medication for it, but he wants to put you on a new drug, and you’re fine with that. Then he leans in close and says in his most reassuring, man-to-man voice, “I should tell you that a small number of my patients have experienced some minor sexual dysfunction on this drug. It’s nothing to be ashamed of, and the good news is that this side effect is totally reversible. If you have any ‘issues’ in the bedroom, don’t hesitate to call, and we’ll switch you to another type of drug called an ACE inhibitor.” OK, you say, you’ll keep that in mind…..

Battling antivaccinationists at FreedomFest by Orac:

Like so many other skeptics, I just returned from TAM, which, despite all the conflict and drama surrounding it this year, actually turned out to be a highly enjoyable experience for myself and most people I talked to. As I’ve been doing the last few years, I joined up with Steve Novella and other proponents of science-based medicine to do a workshop about how difficult it is to find decent health information on the Internet, and how the “University of Google” all too frequently puts quackery on the same level as reliable sources of medical information because all that matters for most search engines when it comes to ranking search results is the number and kinds of sites that link to a given site…..

Epic fraud: How to succeed in science (without doing any) by John Timmer:

Running scientific experiments is, frankly, a pain in the ass. Sure, it’s incredibly satisfying when days or weeks of hard work produce a clean-looking result that’s easy to interpret. But often as not, experiments simply fail for no obvious reason. Even when they work, the results often leave you scratching your head, wondering “what in the world is that supposed to tell me?” The simplest solution to these problems is obvious: don’t do experiments….

One Molecule for Love, Morality, and Prosperity? by Ed Yong:

Imagine a molecule that underlies the virtues that glue societies together. Imagine that it brought out the better angels of our nature with just a sniff and could “rebond our troubled world.” Imagine that it was the “source of love and prosperity” and explained “what makes us good and evil.” Well, carry on imagining. This is a story about oxytocin, and oxytocin is not that molecule….

How We Changed Penguins Just by Watching by Elizabeth Preston:

If a penguin falls in the forest and no one is there to hear it, I don’t know what kind of forest that is—but everyone who’s interested in penguins is probably hanging out a lot closer to the South Pole. The charismatic birds let scientists and tourists alike get a close look without too much trouble. And all that familiarity has the potential to change penguins, and other closely watched animals, for good….

What Would Happen If a Lion Fought a Tiger? by Natalie Wolchover:

This ultimate cat fight has happened more times than you might expect. The Romans pitted African lions against Asian tigers in the Coliseum, to the rip-roaring pleasure of the Plebeians. A few fights were also staged in the early decades of the 20th century, and on several modern occasions, accidental cross-species encounters at zoos have quickly developed into gruesome scenes guaranteed to scar any nearby schoolchildren for life. But how do these lion versus tiger showdowns go down?…

In Search of Grote Reber by Matthew Francis:

Unlike most sites where the business of cosmology is done, Fermi National Accelerator Laboratory—known colloquially as Fermilab—isn’t in a remote spot. The facility is in Batavia, Illinois, part of the sprawling metroplex of Chicago, and it’s just a short drive from two major tollways. The Standard Model describes a plethora of particles, but it has nothing on the number of fast-food joints and auto shops within ten minutes’ drive of the Fermilab gates. My friend hosting me during my stay in Illinois wasn’t even aware of the lab’s location, despite having friends living close by—the area around it is that dense…

Dancing in digital immortality: The evolution of Merce Cunningham’s “Loops” by Ashley Taylor:

The modern dancer and choreographer Merce Cunningham died in 2009, and his company gave its final performance at the end of last year. Many of his dances will live on in the memories of former company members who go on to restage them. But there’s one solo, “Loops,” that Cunningham never taught to another dancer. This piece lives on through a different medium: digital motion capture…

 

Special topic: Science of Superheros

Batman and Gotham: A Deeply Dysfunctional Love Story by Adam Rogers

The horrifying physiological and psychological consequences of being Aquaman by Southern Fried Scientist

Dear Science, leave Aquaman alone! by AmasianV

Why Aquaman is the best damn superhero in comic history by Cyriaque Lamar

Physics Shows Batman’s Cape Is Suicide Machine by Liat Clark

The Fall and Rise of the Dark Knight-the Difficulties of Batman’s Life While He Exists by E. Paul Zehr

Science sways superheroes by Alan Boyle

 

Best Images:

The Goddamned Particle by Perrin Ireland

Your Skeleton – on the Internet by Daniel Lende

Animals With Misleading Names by Rosemary Mosco

The Bizarre, Breathtaking Science Photos of Fritz Goro by Tanya Lewis

American World War II Plague Posters by Michelle Ziegler

Beautiful biodiversity illustrations by Becca Stadtlander

 

Best Videos:

Friday Science Cinema by Justine E. Hausheer

When astronomers get video cameras…… by Niall

NSF Rhode Island Video Boot Camp participant Dr. Sunshine Menezes delivers her message. by NSFMessengers

Tagging Giants: Studying Whale Sharks in Cendrawasih Bay by Mark Erdmann

Variety is the Spice of Lice by TheFieldMuseum

Five Men Agree To Stand Directly Under An Exploding Nuclear Bomb by Robert Krulwich

Chuck Norris, tapeworms, and the future of science: video of my keynote talk by Carl Zimmer

 

Science:

Patients, Prisoners, and Mass Shootings — A Timeline by David Dobbs

Gorilla Youngsters Seen Dismantling Poachers’ Traps—A First by Ker Than

Life on the Leg of a Crab by Craig McClain

Can you Shoot an Arrow Backwards – into Space? by David Dilworth

How to “downplay the achievements of science” by Eoin Lettice

Why Facial Disfigurements Creep Us Out by Joseph Bennington-Castro

Wisconsin’s Sand Rush by Kate Prengaman

A Way to Trap Carbon Deep in the Ocean and City Officials Declare War on Lawn Gardens by Rachel Nuwer

From Living Room to Lily Pad: Is the Fatal Amphibian Chytrid Fungus Spread via Pet Frogs? by Sarah Fecht

Just good friends? Attraction to opposite-sex friends is common but burdensome by Christian Jarrett

Just My Luck (or is it?) by David Nussbaum

The Bra Is 500 Years Older Than We Thought and 400 Years Worth of Water Discovered in Sub-Saharan Namibia by Colin Schultz

Learning from the Tubeworm by Michelle Nijhuis

The Real Life of Pi by Noby Leong

How would you like to sleep with the fishes? by aranyak

‘Get Over It’: Climate Change Is Happening by Eric Roston

Recycling the Seasons by Erin Gettler

Fusing chromosomes by John Hawks

No sweet outcome for PhD worker bees by Elizabeth Gibney

Q&A With Mariette DiChristina: Born a Scientist by Jeanne Garbarino

Lion’s Mane Jellyfish Image: This Is (Literally) How Things Blow Up On The Internet! by Anthony Wing Kosner

The Endless Summer by Mark Bittman

Performance enhancement: Superhuman athletes by Helen Thompson

Discovery of ‘God particle’ has UNC roots by Samuel Mason

Just the facts ain’t enough, ma’am by Wilson da Silva

Artificial Volcanoes Aren’t the Solution to Warming by Erik Klemetti

Dolphins May Be Math Geniuses by Jennifer Viegas

New Science Emboldens Long Shot Bid for Dolphin, Whale Rights by Brandon Keim

What it’s Like to Witness a Grunion Run by Jason Goldman

Everything Is a Remix: The Sound of Horses Racing on TV Is Actually a Sample of Buffaloes Charging and Exploding Chocolate, Poisoned Scuba Suits, and the Bulgarian Umbrella: A Survey of Strange Assassination Tech by Alexis Madrigal

Secrets of the clam tongue: a case study in opportunistic science outreach and New nightmare fuel: the giant scaleworm Eulagisca by Miriam Goldstein

Pardon me–is this stool taken? by Bug Girl

10 species named after famous people by Bethan Jinkinson

Pancakes, served with a side of science by Aatish Bhatia

One fish, two fish and 400,000 zebrafish by Kathleen Raven

The Dirty Dozen: A wish list for psychology and cognitive neuroscience by Chris Chambers

Brain Scanning… Or Vein Scanning? by Neuroskeptic

What was the oldest Olympic sport? by Greg Laden

Dr Hornstein hasn’t gone the way of the dinosaur by Lucy Hornstein

Science Metaphors (cont.): Sub-Grid Physics by Ann Finkbeiner

Will we ever run the 100 metres in 9 seconds? by Ed Yong

Dinosaur Aunts, Bacterial Stowaways, & Insect Milk by Katie Hinde

Geneticists Evolve Fruit Flies With the Ability to Count by Liat Clark

Scientists take a bird’s eye view to prevent bird-aircraft collisions by Allie Wilkinson

Technique gets clear images from light reflected off blank paper by Matthew Francis

Vitamin D gets frequent testing, but the results are a bit quizzical by Jessica M. Morrison

How Placebo’s Evil Twin Makes You Sicker by Elizabeth Preston

Galápagos Monday: When Conservation Means Killing by Virginia Hughes

‘Canopy Meg’ wants you to care about the rainforest by Samantha Larson

Person With Autism Manages To Do Something by Zoe

Using zombies to teach science by Tara C. Smith

Ecomorphs Converge On Suites Of Correlated Traits by Yoel Stuart

Is Society Becoming Over-Medicalized? Interview with Executive Editor of Reuters Health, Dr. Ivan Oransky by Shiv Gaglani

How land-inefficient is organic agriculture? by Mark Lynas

Record Heat Wave Pushes U.S. Belief in Climate Change to 70% by Mark Drajem

 

Media, Publishing, Technology and Society:

That plan to archive every tweet in the Library of Congress? Definitely still happening by Andrew Phelps

More on the Library of Congress and Twitter by Dave Winer (also see my Science Blogs – definition, and a history)

v1 by Rethink Digg

Example Visualizations using the PLoS Search and ALM APIs and More fun with Visualizations by Martin Fenner

ScienceWriters2012: The NC Scouting Report by Rosalind Reid

Could the iPad save magazines? by Molly Mirhashem

The techies in journalism are not the problem by Anna Tarkov

Readership of papers vs. blog posts by Jeremy Fox

Why Flip The Classroom When We Can Make It Do Cartwheels? by Cathy N. Davidson

Higgs this, boson that by Richard Panek

Beginner Blogging – The Prequel by Renee Dobbs

Power to the People (When it Comes to Funding Research) by Aurélie Coulon

Curation techniques, types and tips by Steve Buttry

No Internet For One Year: Tech Writer Tries Life Offline by Joanna Stern

Why Dave Winer Invented the Blog and How blogging came to be by Dave Winer

Introducing #smarttakes: pop-up aggregation from the Guardian by Ruth Spencer

‘False Balance’ in Some Coverage of Carolina Sea-Level Controversy by Sara Peach

Brought to book: Academic journals face a radical shake-up by The Economist

All’s Not Fair in Science and Publishing by Frederick Southwick

Let journalists do their jobs by David Wescott

How Academics Face the World: A Study of 5829 Homepage Pictures by Owen Churches, Rebecca Callahan, Dana Michalski, Nicola Brewer, Emma Turner, Hannah Amy Diane Keage, Nicole Annette Thomas and Mike Elmo Richard Nicholls

MIT Economist: Here’s How Copyright Laws Impoverish Wikipedia by Robinson Meyer

Why ‘future of journalism’ confabs fail by Alan D. Mutter

Why paywall journalism is changing how journalists write by Tim Burrowes

ProPublica gets $1.9 million from Knight to expand its efforts in data journalism by Adrienne LaFrance

The trouble with content by Jeff Jarvis

The Scholar’s Frenemy by PHLane

Dealing with Edits and Comments by hurleybirds

Don’t Have Time to Tweet-bollocks! Twitter can even save you time as a scientist. by Scott Wagers

Communicating science in the age of the internet by Deevy Bishop

Laptops in Lecture? by Rhett Allain

What was the first science blog? by Paul Raeburn

Scientific particles collide with social media to benefit of all by Marie Boran

On science blogs this week: Scandal by Tabitha M. Powledge

Standing on the Shoulders of Bloggers: Carnival frustration searing my soul. by Thony Christie

The Rise of Open Science by Roger Câmara

The Web Is Not the Internet (You’re Probably Getting That Wrong) by Abraham_Riesman

Delete the Save Button by Farhad Manjoo

How Reddit Became the Internet’s Vigilante Voltron by Wylie Overstreet

 

======

Blogs of the Week so far:

May 11, 2012: Academic Panhandling
May 18, 2012: Anole Annals
May 25th, 2012: Better Posters
June 1st, 2012: Vintage Space
June 8th, 2012: Tanya Khovanova’s Math Blog
June 15th, 2012: Russlings
June 22nd, 2012: Parasite of the Day
June 29th, 2012: March of the Fossil Penguins
July 6th, 2012: Musings of a Dinosaur
July 13th, 2012: Contagions

The Scienceblogging Weekly (July 13th, 2012)

Blog of the Week:

Contagions is a blog written by Michelle Ziegler (Twitter, Facebook, the other two blogs by Michelle – Heavenfield and Selah – are focused entirely on history and not on medicine or science). In Contagions, Michelle explores infectious disease – there is a lot about the Plague – from history to epidemiology to most recent scientific papers. Sometimes gruesome, always fascinating.

 

Top 10:

Is Autism an “Epidemic” or Are We Just Noticing More People Who Have It? by Emily Willingham:

In March the US Centers for Disease Control and Prevention (CDC) the newly measured autism prevalences for 8-year-olds in the United States, and headlines roared about a “1 in 88 autism epidemic.” The fear-mongering has led some enterprising folk to latch onto our nation’s growing chemophobia and link the rise in autism to “toxins” or other alleged insults, and some to sell their research, books, and “cures.” On the other hand, some researchers say that what we’re really seeing is likely the upshot of more awareness about autism and ever-shifting diagnostic categories and criteria….

New technique identifies magnetic cells in animals by watching them spin by Ed Yong:

A migrating robin can keep a straight course even when it flies through a cloudy night sky, devoid of obvious landmarks. That’s because it can sense the Earth’s magnetic field. Something in its body acts as a living compass, giving it a sense of direction and position. This ability – known as magnetoreception – isn’t unique to robins. It’s been found in many other birds, sharks and rays, salmon and trout, turtles, bats, ants and bees, and possibly cows, deer and foxes. But despite more than 50 years of research, the details of the magnetic sense are still elusive….

The Sex Scholar by Kara Platoni:

Decades before Kinsey, Stanford professor Clelia Mosher polled Victorian-era women on their bedroom behavior—then kept the startling results under wraps….

Bloggers and Bowerbirds by Erin Kissane:

There are still a lot of elbows being thrown in the squabble about “creation” versus “curation,” and it seems to be getting worse. As humans tend to do, we’re talking past each other and pretending to simplicity in the face of the complex and the weird. Here’s what I think is going on. I think we’re getting tripped up by two things: clumsy language and a misapprehension about competition for limited resources….

Citations, Social Media & Science by Morgan D. Jackson:

This morning I was reading a newly published paper that I found intriguing, not only for its content1 but also for who it cited — sort of. Among the regular cadre of peer-reviewed journal articles supporting the author’s findings were two blog posts by University of Glasgow professor Roderic Page. Rod is a major proponent for digitizing and linking biodiversity literature with all aspects of a species’ pixel-trail across the internet, so I was excited to see his blog being “formally” recognized. As I finished reading the paper and reached the References section, I skimmed through to see how a blog citation might be formatted. Much to my dismay, after breezing through the L’s, M’s, and N’s I found myself within the R’s, with nary a Page in sight…

Investigation: Drug Resistance, Chicken And 8 Million UTIs by Maryn McKenna:

…I’ve been working with a great new group, the Food and Environment Reporting Network — one of the grant-funded journalism organizations that have arisen in the wake of the collapse of mainstream journalism — on an important, under-reported topic. Which is: Over the past decade, a group of researchers in several countries have been uncovering links between the use of antibiotics in chicken production and the rising occurrence of resistance in one of the most common bacterial infections in the world. The infection in question is UTI, which just about every woman I know will recognize: It stands for urinary tract infection, and on average one out of every 9 women in the United States suffers one at least once per year. There are 6 million to 8 million UTIs in the US each year, costing at least $1 billion in healthcare spending….

The hows and whys of human attraction by Barbara J. King:

Robin Dunbar may not be a household name, but some of his thinking has reached the status of household ideas. You’ve heard that 150 is an approximate upper limit on the number of our family-and-friend relationships because that’s how many connections we can track? That’s Dunbar. You’ve read the theory that language evolved as a sort of replacement for hands-on grooming among our primate relatives when group size got big? That’s Dunbar too. Now, in The Science of Love and Betrayal, Dunbar, who is Professor of Evolutionary Anthropology at Oxford, asks seductive questions about love and friendship. Why do men and women pair-bond when so many other animals don’t? How do biology and sociality intersect in explaining human attraction to others? …

Crimes and Misdemeanors: Reforming Social Psychology by Dave Nussbaum:

The recent news of Dirk Smeesters’ resignation is certainly not good news for social psychology, particularly so soon after the Diedrik Stapel case, but I believe it can serve as an opportunity for the field to take important steps towards reform. The reforms that are needed the most, however, are not restricted to preventing or detecting the few instances of fraud by unscrupulous researchers who are intentionally falsifying data. What we should be more concerned about are the far less egregious, but much more common offenses that many of us commit, often unknowingly or unintentionally, and almost never with fraudulent intent….

The Vampire of Venice Returns, or What Is that Brick Doing in that Skull’s Mouth? by Kristina Killgrove:

It seems like every spring there is renewed coverage of a partial skeleton that was found on the island of Lazaretto Nuovo (one of two 15th-16th century leper colonies near Venice) in 2009. I’ve never covered it here, but since I was alerted to an airing of a documentary about the skeleton on Italian TV this week, I thought it may be time to track the progress of the so-called Vampire of Venice (“il vampiro di Venezia” in Italian, and not to be confused with a similarly named Dr. Who episode)….

How the Deaf Brain Rewires Itself to ‘Hear’ Touch and Sight by Nadja Popovich:

Our experiences help shape our brains. So it might make sense that for a person born without hearing, the part of the brain that’s meant to process audio would be underdeveloped. But according to a new study, those who have been deaf since birth actually use the sound-related part of the brain — known as the primary auditory cortex — to do even more heavy lifting than their hearing counterparts. …

 

Special topic 1: #arseniclife:

The Case (Study) of Arsenic Life: How the Internet Can Make Science Better by Rebecca J. Rosen

Live-blogging Arsenic Life by Carl Zimmer

Discovery of an arsenic-friendly microbe refuted and Q and A: Critical ‘Arseniclife’ studies released by Dan Vergano

Pair Of Studies Rebuts Arsenic-Based Life by Carmen Drahl

Arsenic Death by ChemBark

“Arsenic bacteria”: Coffin, meet nails by Ashutosh Jogalekar

Arsenic Life, Cold Fusion, and the Allure of Wishful Thinking by Matthew Francis

Another chink in the Ingelfinger armor? Arsenic life talk forces Science to release paper early, without embargo and Science has “not asked for a correction or retraction” of arsenic life paper, and why situation is unlike XMRV-CFS by Ivan Oransky

Arsenic-Life Discovery Debunked—But “Alien” Organism Still Odd by Richard A. Lovett

Consider the publication embargo… and NASA’s cowardly responses to their #arseniclife FAIL by Rosie Redfield

New research points toward “no” on arsenic life by Phil Plait

Annoying Arsenic Claim Debunked for Good – We Hope. by Faye Flam

Notorious Arsenic-Tolerant Bacterium Needs Phosphorus After All by Quirin Schiermeier

Despite refutation, Science arsenic life paper deserves retraction, scientist argues by David Sanders

Two studies show ‘weird life’ microbe can’t live on arsenic by Alan Boyle

Latest on #ArsenicLife by Jonathan Eisen

Journal retreats from controversial arsenic paper by Marc Kaufman

New Science Papers Prove NASA Failed Big Time In Promoting Supposedly Earth-Shaking Discovery That Wasn’t by Matthew Herper

 

Special topic 2: glut of PhDs:

WaPo: Not enough jobs for science PhDs by David Kroll

The STEM PhD Glut Makes the Mainstream Media by Mike the Mad Biologist

Subtleties of the Crappy Job Market for Scientists by Julianne Dalcanton

The wages of a life science Ph.D. (not high!) and More on jobs & Ph.D.s by Razib Khan

“Alternate careers” is just the next exploitation strategy? by DrugMonkey

Too many scientists? by Puff the Mutant Dragon

Washington Post: “U.S. pushes for more scientists, but the jobs aren’t there.” by Chemjobber

Life as PhD student by Elf Eldridge

 

Best Images:

TICKS ON A SNAKE by teresa.frog.applause

On Writing by Abstruse Goose

Here’s Something You Don’t See Every Day by Jonathan Losos

Arctic Biologist Shares Astonishing Sea Creatures With the World by Pete Brook

Visual Field by xkcd

 

Best Videos:

Nobel laureate occasionally hangs out on street corners, answering physics questions by Maggie Koerth-Baker

Snake Stunt: Drinking While Dangling by Andrew C. Revkin

Talent Search » TED@Vancouver » Carin Bondar: Reproduction and survival in the animal kingdom

Talent Search » TED@Sydney » James Byrne: How plants have sex

Stomach Bacteria Show Early Human Travels by skepTV

Piecing together Patagonia’s ancient vegetation by Melanie Connor

Opening Keynote from Cameron Neylon – Network Enabled Research by Open Repositories 2012

‘Big Ass Shark’ Unexpectedly Swipes Fish Off Girl’s Line Like Something Out of a Movie by Neetzan Zimmerman

The Higgs Boson, Part II: What is Mass? by MinutePhysics

Alan Turing: His Mind, His Life (VIDEO, Part Two) by Cara Santa Maria

This is What Snake Venom Does to Blood! by fragrancemad

Is Apollo 18 Real? by Amy Shira Teitel

#CurlyHairMafia on the Secret of NIMH by DNLee

From Galileo to Galaxy Zoo: Astronomy in the Digital Age by Alessandro Mangiafico

 

Science:

No, the web is not driving us mad and Why I am always unlucky but you are always careless by Vaughan Bell

Where are the Canadian media in analysing the Death of Evidence protest? by Marie-Claire Shanahan

The Dead Sea is Dying: Can
A Controversial Plan Save It?
by Dave Levitan

Trajectory of a falling Batman by Ben Goldacre

The mundaneness of science by Christie Aschwanden

Brain Scans Predict When Poker Players Will Bluff and Why Successful Leaders Share Their Harems by Elizabeth Preston

Egg-eating snakes and This blog is supposed to be about snakes, but if you can’t make exceptions for family, then you’re a jerk by Andrew Durso

Doubt Is Good for Science, But Bad for PR by Stuart Firestein

When you throb with pain…are you feeling the beat? by scicurious

Little fellah bums by Michael Wellan

Silk cages preserve vaccines and antibiotics for months without refrigeration and Urban noise can turn sparrow females into bad mums and Chicken vaccines merged to form live viruses and caused outbreaks of irony and Uncertainty shrouds psychologist’s resignation by Ed Yong

South Carolina Governor Nikki Haley slashes funding for coastal science and sustainable development by David Shiffman

Daily Mail, HuffPo Dumb Down Dinosex by Brian Switek

Q&A With Deborah Berebichez: Seeing the World Through Physics Glasses by Double Xpression

Mathematics and HIV by Jessica Wapner

Thai Farmers Fight ‘Global Warming Fines’ by Prangtip Daorueng

Why Crowds Can Turn Deadly by Emily Badger

You can hide those lying eyes by Zen Faulkes

You can’t ban redheaded sperm by David Winter

Zombies and Volleyball: The Benefits of the Bystander Effect by Melanie Tannenbaum

Q: Why Do We Wear Pants? A: Horses by Alexis Madrigal

There is something and not nothing by Roger Ebert

Want to Get Teens Interested in Math and Science? Target Their Parents by Anna Mikulak

Scientific History and the Lessons for Today’s Emerging Ideas by The Physics arXiv Blog

A striking experiment shows how you can run on quicksand and Black hole shines a light on dark galaxies by Matthew Francis

Why Canada’s scientists need our support by Alice Bell

Why Eugenics Will Always Fail by Esther Inglis-Arkell

Gnathia marleyi — or not by Susan Perkins

Will We Ever Find All the Dinosaurs? by Brian Switek

Should we all be guinea pigs? by John Rennie

Pipes, Reins, & the Cerebral Winepress: Mechanical Metaphor in Vesalius’ Fabrica by Marri Lynn

The climate of the climate change debate is changing by Myles Allen

Lizards Can’t Take The Heat – But Can They Take The Cold? by Martha Munoz

Crackpots, geniuses, and how to tell the difference by Maggie Koerth-Baker

Relativistic Baseball: What would happen if you tried to hit a baseball pitched at 90% the speed of light? by xkcd

I saw the (negative) sign: Problems with fMRI research by Dana Smith

Nikola Tesla and the magic of science by Danica Radovanovic

Why George Will Is Wrong About Weather And Climate by Jocelyn Fong

If “Fifty Shades of Grey” Had Been Written by a Biology Textbook Author by Ricki Lewis

Keeping Parkinson’s Disease a Secret by Kate Yandell

Distrusting Scientific Research by Kelsey Tsipis

Weird Fiction Monday: Mass Effect: Apocalypse by Greg Gbur

Could the S.H.I.E.L.D. Helicarrier Fly? by Rhett Allain

Planet of the Mega Disasters by Faye Flam

Dr. Drew Cashes In by Charles Seife

Galápagos Monday: The Sad Sex Life of Lonesome George by Virginia Hughes

Crowdfunding Questions With Petridish.org Co-founder Matt Salzberg by Travis Saunders

Roid Age: steroids in sport and the paradox of pharmacological puritanism by Greg Downey

Traditional Sexual Values Challenged in Classic Animal Study by Brandon Keim

Painless Injections by Tianyou Xu

Down, boy! The politics of humping by jwoestendiek

Notes on Some of Those 79 “New” Shark Species by Chuck Bangley

What’s the difference between “Opossum” and “Possum”? by Jason Bittel

A Brief History of Money by James Surowiecki

Tree Rings and Climate: Some Recent Developments by Michael E. Mann, Gavin Schmidt, and Eric Steig

The American Heat Wave and Global Warming by MarkCC

Brain Time by David Eagleman

Increase in wildfire frequency and severity – is it real? by Kelly Ramirez

 

Media, Publishing, Technology and Society:

If Mitt Romney were running a “post-truth” campaign, would the political press report it? by Jay Rosen

Chronicling Mitt’s Mendacity, Vol. XXV by Steve Benen

SPARC Europe’s response to the inaccuracies in the article by the Daily Mail’s City Editor on 18 June by Alma Swan

Wheeler: Spoken word, handwritten letters make lasting impressions by Burgetta Wheeler

The Blogfather on science blogging by NASW

Twitter and the Arab Spring: New Evidence by Henry Farrell

Predatory Open-Access Journals? by Sarah Hird

Academic blogging: minority scholars cannot afford to be silent by Denise Horn

Should Applied Funding Go To Academia Or Startups? by Elizabeth Iorns

The Importance of Open Access: An Interview with Patient Advocate Graham Steel by PatientsLikeMe

Are you sure that’s true? Truth Goggles tackles fishy claims at the moment of consumption by Andrew Phelps

The Dreamers’ dreams: young immigrants tell their stories by Ruth Spencer

Retraction tracking by Zen Faulkes

J-school grads turn to startup scene by Anne Field

Thoughts on the Finch Report, part 1 and Part 2 by Mike Taylor

A history of science blogging and Reflections on 10 years in science blogging by Razib Khan

A History of Science Blogging and Communicating Science to Society by Larry Moran

Bora’s Science Blogging Post by Eva Amsen

Video Tip of the Week: ScienceSeeker for science blogging by Mary Mangan

Sharpening ideas: From topic to story by Dan Ferber

Challenging ‘He Said, She Said’ Journalism by Linda Greenhouse

Are we stuck in filter bubbles? Here are five potential paths out by Jonathan Stray

Alan Alda warms up science communication with the Flame Challenge and The Flame Challenge winners, and other attempts to get science communication out of its rut by Peter Linett

Darpa Wants You to Be Its Hackathon Guinea Pig by Arikia Milikan

Science journalism through the looking glass by Chris Chambers and Petroc Sumner

How the byline beast was born by Jack Shafer

The left’s gone left but the right’s gone nuts: Asymmetrical polarization in action by David Roberts

Confessions of an Internet Addict by Alexis Madrigal

Science, Blogging and Plagiarism by Michael McBurney

How future-safe was the first Harvard blogging site? by Dave Winer

Why Blogs Fail by Neuroskeptic

Takes Two to Tango by Karen McLeod

How to live-tweet from an event by Tia Fisher

Is Open Access a Moral or a Business Issue? A Conversation with The Pennsylvania State University Press by Prof. Hacker

Reflections on Games For Change by Eric Martin

All’s Not Fair in Science and Publishing by Frederick Southwick

The ultimate geek road trip: North Carolina’s mega data center cluster by Katie Fehrenbacher and 10 reasons Apple, Facebook & Google chose North Carolina for their mega data centers and The controversial world of clean power and data centers and The story behind how Apple’s iCloud data center got built and That’s a wrap: The 4-part series on North Carolina’s mega data centers

What should society journals do about open access? and What does it cost to publish a paper with Elsevier? by Mike Taylor

The Blob versus the blog: arguing how social media is changing science and Transformative idea for peer review: reviewing & grading the reviewers by Paul Knoepfler

Three Keys to Clearing Two Social Media Hurdles by Farris Timimi

How the iPad helps scientists do their jobs by Joel Mathis

Reforming Copyright Is Possible by Pamela Samuelson

Piecemeal existence: For today’s young freelancers, what will traffic bear? by Ben Adler

The significance of plot without conflict by Still Eating Oranges

The Scienceblogging Weekly (July 6th, 2012)

Blog of the Week:

Musings of a Dinosaur is a blog written by a physician, family practitioner, Lucy E. Hornstein, author of the book Declarations of a Dinosaur: 10 Laws I’ve Learned as a Family Doctor. Having a small general family practice is different from beeing a specialist in a large hospital. Approach to patients is different. The way one runs the business is different. The thoughts about electronic medical records (a frequent topic of the blog) are different. A valuable perspective, wry and funny and insightful.

 

Top 10:

Maxwell’s demon goes quantum, can do work, write and erase data by Matthew Francis:

At any temperature above absolute zero, particles in a system move randomly, an effect known as thermal fluctuation. The random character of the fluctuations means they cannot be put to work in a mechanical sense (the measure of the energy unavailable for work is called entropy). 19th century physicist James Clerk Maxwell proposed a tiny intelligent “demon” that could harvest the thermal fluctuations to restore their usefulness; later work in the 20th century showed that the demon itself would have entropy, which would keep the thermodynamic books balanced.

Interesting by Shara Yurkiewicz:

I pull up a test result for my patient, and the senior resident standing behind me lets out an excited squeal. “I’ve never seen the imaging come back positive for this,” she says. Our two-week-old infant, who already has a rare infection, also has a rare associated structural abnormality. It’s not benign, but it is fixable. The fix usually requires surgery. As we walk over to the patient’s room to update her mother, my senior gushes about the zebra that was uncovered on the ultrasound. She asks me if I’m excited. “I dunno,” I mutter, which is somewhat more diplomatic than my disgust that she is. ”Her kid has to get surgery now.”

The world’s smallest fly probably decapitates really tiny ants by Ed Yong:

…Even though flies as a group aren’t exactly giants, the new species was around half the size of the previous smallest species. Brown named it Euryplatea nanaknihali after Nanak Nihal Weiss, a young boy from Brown’s home town in Los Angeles. Weiss is an entomology fanatic and Brown hopes that the name will help to keep his interest for years to come….

Creationists and Climate “Skeptics” – Separate Species or Just Different Breeds? by Faye Flam:

Several of the regular readers of this column have told me that since I’ve been brave enough to tell the truth about evolution, I should do the same for climate change and expose it as a hoax. In one case I replied that in my stories I always strive to reflect the truth to the best of my abilities. He wrote that he was “disappointed.” These evolution-accepting climate change “skeptics” are an interesting breed, revealing some key differences in the ways they and creationists approach science. Self-described climate skeptics are much more scattered in their views than are creationists, but they are better organized and together speak with a louder, and angrier voice….

Printing dinosaurs: the mad science of new paleontology by Laura June:

In April of this year, I headed out to a marl pit in Clayton, New Jersey to watch a team of Drexel University students and their teacher, Professor Kenneth Lacovara, dig for fossils. Marl, a lime-rich mud, had been mined and used as the 19th century’s leading fertilizer, but since around World War II (with the development of more advanced, synthetic fertilizers), demand for it has steeply lessened, and there aren’t many marl mining businesses left in the US. The marl pits of Southern New Jersey are famous for something else, though: they have been incredibly rich in fossil finds. In February, Dr. Lacovara had announced that the Paleontology department at Drexel would team up with the Engineering department for what would largely be a novel new project: scanning all of the fossils in the University’s collection (including some previously unidentified dinosaurs of Lacovara’s own finds in other parts of the world) using a 3D scanner. The Engineering department would then take those scans and use a 3D printer to create 1/10 scale models of the most important bones. But, he reported, that wouldn’t be the end of it: they intended, he said, to use those scale polymer “printouts” to model and then engineer fully working limbs, complete with musculature — to create, in effect, a fully accurate robotic dinosaur leg or arm, and eventually, a complete dinosaur….

Childbirth and C-sections in pre-modern times by Kristina Killgrove:

Basically since we started walking upright, childbirth has been difficult for women. Evolution selected for larger and larger brains in our hominin ancestors such that today our newborns have heads roughly 102% the size of the mother’s pelvic inlet width (Rosenberg 1992). Yes, you read that right. Our babies’ heads are actually two percent larger than our skeletal anatomy…

Self help: forget positive thinking, try positive action by Richard Wiseman:

For years self-help gurus have preached the same simple mantra: if you want to improve your life then you need to change how you think. Force yourself to have positive thoughts and you will become happier. Visualise your dream self and you will enjoy increased success. Think like a millionaire and you will magically grow rich. In principle, this idea sounds perfectly reasonable. However, in practice it often proves ineffective….

The Uncertainty Principle for climate (and chemical) models by Ashutosh Jogalekar:

A recent issue of Nature had an interesting article on what seems to be a wholly paradoxical feature of models used in climate science; as the models are becoming increasingly realistic, they are also becoming less accurate and predictive because of growing uncertainties. I can only imagine this to be an excruciatingly painful fact for climate modelers who seem to be facing the equivalent of the Heisenberg uncertainty principle for their field. It’s an especially worrisome time to deal with such issues since the modelers need to include their predictions in the next IPCC report on climate change which is due to be published next year….

The living rainbow: A fatal flaw in a classic study of sexual selection by Jeremy Yoder:

A key component of classical sexual selection theory is the idea that males maximize their evolutionary fitness—the number of children they ultimately have—by mating with lots of females, while females maximize their fitness by selecting only one or a few high-quality partners. It’s pretty clear that this model works well for some species (like ducks), but also that there are many it doesn’t fit so well. Now it looks like one of the “classic” experimental examples of sexual selection may actually fall into the latter category….

Dr. Google and Mr. Hyde by David Gorski:

….Like all major new technologies, the Internet has a good side and a bad side. In many cases, the same property is both good and bad, and one place that this is particularly true is in medical information. The Internet has an abundance of medical information, all there for the reading and learning, and various discussion forums that began with online BBS services and the now mostly obsolete global discussion community of Usenet allow people from all over the world who would never have communicated directly with each other before to share information and experiences. Unfortunately, there is a dark side to this. Regular readers of this blog know what that dark side is, too. The same technology that allows reputable scientists and doctors to publish reliable medical information to the world at very low cost also allows quacks and cranks to spew their misinformation, nonsense, pseudoscience, and quackery to the whole world at very little cost. And, boy, do they ever! In many ways, the quacks are a far more effective online presence than skeptics and supporters of science-based medicine. I mean, look at SBM itself. We’re still using a generic WordPress template. Now look at an antivaccine website like The International Medical Council on Vaccination or Generation Rescue or the antivaccine blog Age of Autism. Look at quack websites like NaturalNews.com The comparison, at least when it comes to web and blog design, is not flattering…..

 

Special topic: Higgs boson:

What is the Higgs boson? – video by Ian Sample and Laurence Topham

What Is the Higgs Boson? [Video] by George Musser

Higgs Boson VIDEO: A Metaphor To Explain The Particle, Or Further Confuse You by Cara Santa Maria and Henry Reich

Sonnet on a Higgs-Like Particle (video) by Vi Hart

New Particle Resembling Long-Sought Higgs Boson Uncovered at Large Hadron Collider by John Matson

If You Want More Higgs Hype, Don’t Read This Column by John Horgan

Beyond Higgs: On Supersymmetry (or Lack Thereof) by Glenn Starkman

Mr Boson, I presume…? by Charles Ebikeme

Live-Blogging the Higgs Seminar by Sean Carroll

Science Friday by Sean Carroll

Higgsteria: We Didn’t Need No U.S. Super Collider by Gary Stix

Pros and Cons of building particle accelerators – Werner Heisenberg by Beatrice Lugger

Higgs? Probably not tomorrow and Discovering a boson and Linux at CERN and The mysterious Mr. Higgs by Gianluigi Filippelli

Who gives a Higgs? by Jacqui Hayes

What If the New Particle Isn’t the Higgs Boson? by Natalie Wolchover

Why the Higgs Particle Matters by Matt Strassler

The Best Analogies Scientists and Journalists Use To Explain the Higgs Boson by J. Bryan Lowder

High on Higgs by Subhra Priyadarshini

Stop calling it “The God Particle!” by Dr. Dave Goldberg

The Higgs Boson explained by PhD Comics by Jorge Cham, via Nathan Yau

Scientists’ search for Higgs boson yields new subatomic particle by Brian Vastag and Joel Achenbach

The Higgs Boson – Certainly, certainly (?) there! (at least, I am pretty certain it is) by Julian Champkin

Gallery: how Wired readers picture the Higgs Boson by Ian Steadman

The Art of Science – Particle Accelerator Art by Michele Banks

Gettin’ Higgy With it: A Roundup of Higgs Boson Jokes on Twitter by Xeni Jardin

Higgs! by Phil Plait

Higgs Boson: the jokes edition by Khalil A. Cassimally

Scientists might have found the Higgs Boson by Maggie Koerth-Baker

Higgsdependence Day! by Matthew R. Francis

Physicists Find Elusive Particle Seen as Key to Universe by DENNIS OVERBYE

How the Discovery of the Higgs Boson Could Break Physics by Adam Mann

CERN Announces Discovery of Higgs-like Particle by PRI The World

What It Means to Find “a Higgs” by Mariette DiChristina

So What’s the Big Deal About the Higgs Boson, Anyway? A Physics Double Xplainer by Matthew Francis

A Moment for Particle Physics: The End of a 40-Year Story? by Stephen Wolfram

Higgs-like discovery from the inside by Jon Butterworth

The Higgs Boson and my mom by Laura Jane Martin

What Higgs Boson Evidence Looks Like by Ira Flatow

Higgs boson: Prof Stephen Hawking loses $100 bet by Nick Collins

Physicists Detect New Heavy Particle by Virat Markandeya

Hipster Pop Quiz: What is the Higgs Boson? by Motherboard

These Hipsters Have No Idea About the Higgs Boson by Megan Garber

CERN Finds New Particle (And it Might be the Higgs Boson!) by Miriam Kramer

Does 5-sigma = discovery? by Hyperspace

It’s true, they say they have the Higgs in the bag. Big news. Just imagine the hubbub were it deemed imaginary. and Goldarned god particle by Charlie Petit

So the Higgs boson walks into a… by Eryn Brown

Lighter side of the Higgs boson by Alan Boyle

Nobel Laureates in Physics React to the Higgs-Like Particle News [Video] by Nature magazine

Do You Understand The Higgs Boson? by Fake Science

It’s kind of a Higgs deal by Zen Faulkes

Field Day by Rheanna Sand

 

Best Images:

Snake Oil? The scientific evidence for health supplements by David McCandless and Andy Perkins

Unusual Bridges For Animals – Wildlife Overpasses by THE WORLD GEOGRAPHY

Horoscoped by David McCandless

The complete history of philosophy visualized in one graph by Simon Raper, via George Dvorsky

Paper birds – now with some internal anatomy by Diana Beltran Herrera

How Do We Know by The Census Bureau

 

Best Videos:

Curiosity’s Seven Minutes of Terror by NASA

Hermit Crab in Glass Shell turning over by Robert DuGrenier

Virtual Pigeon Attracts, Baffles Randy Males by Rachel Nuwer

Stephen Colbert Interviews Neil deGrasse Tyson at Montclair Kimberley Academy – 2010-Jan-29 by teridon

Fracking by Carin Bondar

Watch a giant African land snail enjoying a nice cool shower by Lauren Davis

Science Is A Girl Thing: Chris Hardwick, Cara Santa Maria Talk Women In STEM On G4’s ‘Attack Of The Show’ by Cara Santa Maria

Speed Comparison: GT vs. F1 cars by mclaren777

Why We Need to Broaden Participation in Science by RMCRSLDM

Science Writing in the Age of Denial, April 23, 2012 videos by University of Wisconsin-Madison

What Happens Inside the Large Hadron Collider? by George Musser and Rose Eveleth

Som Sabadell flashmob by Banco Sabadell

Octopus ‘vulgaris’ hatchlings hatching by Richard Ross

Ophiarachna Predatory Brittle Star FEEDING ACTION! by ChrisM

Deep-Sea Cephalopods Hide Using Light by AMNHorg

 

Science:

The Good-Old Days of Contraception: Lemon-Peel Diaphragms and Beaver-Testicle Tea by Sophie Bushwick

TGIPF: Iceland’s Phallological Museum by Alex Witze and Jeff Kanipe

The Myth of the Rational Scientist by Byron Jennings

Do scientists need an equivalent of the Hippocratic Oath to ensure ethical conduct? by Lou Woodley

Will We Ever Find Dinosaurs Caught in the Act? and Pterosaurs Done Wrong by Brian Switek

Trees, grass, carbon dioxide and the battle for dominance by GrrlScientist

Franz Boas and Neuroanthropology by Daniel Lende

Altmetrics and the Future of Science by Samuel Arbesman

Lunch: An Urban Invention by Nicola Twilley

The Making Of Meat-Eating America by Dan Charles

How To Start Your Own Farm by Forrest Pritchard

Foie Gras Hypocrisy by Matt Pressberg

U.N. Report from Rio on Environment a ‘Suicide Note’ by Mark McDonald

A “rule-of-forearm” for collecting data in Botswana by Andrew J King

Microbiomes mediating microevolution by Zen Faulkes

Dietary supplements: Manufacturing troubles widespread, FDA inspections show by Trine Tsouderos

Grizzlies move into Polar bear territory by Rebecca Deatsman

The Unsung Scientist, Louis-Antoine Ranvier by Cynthia McKelvey

Turning trauma into story: the benefits of journaling by Jordan Gaines

The tyranny of π: A semirational rant on an irrational number by Jonathan Chang

Draining the Desert? by Kate Prengaman

BOOK REVIEW: Companions in Wonder: Children and Adults Exploring Nature Together by Michael Barton

Ancient impact crater may be largest ever found by Stephen “DarkSyde” Andrew

Rising Heat at the Beach Threatens Largest Sea Turtles, Climate Change Models Show by Rachel Ewing

You Can See Poor From Space by Philadelinquency

Maya Lin: A Memorial to A Vanishing Natural World by Diane Toomey

The Problems With Forecasting and How to Get Better at It by Nate Silver

Ray Bradbury and the Lost Planetarium Show by David Romanowski

Opossums: Survival Machines and Opossum Reproduction by Jason Bittel

Conducting Cells in Mosses by Jessica M. Budke

What’s the difference between one kid with a fever and one without? by Connor Bamford

You want to cut me where? by Steven Salzberg

Birds of the Sun by Christopher Taylor

Coffee: a caffeinated chronicle by Jordan Gaines

Inner Ears Reveal Speed of Early Primates and The Shambulance: Ab Toning Belts (or, Muscle Tone Is All in Your Head) and Flightless Giant’s Flower Diet Revealed by Poop Fossils by Elizabeth Preston

Reviving the ‘apparently dead’ in Georgian Britain by Alun Withey

Don’t trust the religious by P.Z.Myers

Mother Nature Wants to Eat You, or: The Trouble With Alternative Med by Puff the Mutant Dragon

Galápagos Monday: World Within Itself by Virginia Hughes

Not in Our Genes by Bryan Appleyard

On the merits of science literacy by Alice Bell

Defining a hybrid species by Retrieverman

Sleep Research in the Blind May Help Us All by Steven Lockley, Ph.D.

Male Lactation- there’s probably something wrong with you by Noby Leong

Bill McKibben on the Global Warming Hoax by Bill McKibben

Why the Left-Brain Right-Brain Myth Will Probably Never Die by Christian Jarrett

Do Bears Sense That Hunters Are Afoot? and Thinking About Your Own Demise Inspires Environmentalism by Rachel Nuwer

Infrastructure and You by Marie-Claire Shanahan, Scott Huler and Tim De Chant

Bottles Full of Brain-Boosters by Carl Zimmer

New Study: Climate Deniers Are Emoting–Especially the Conspiracy Theorists and The Politics of Ice and Fire by Chris Mooney

What’s Behind The Record Heat? by Douglas Main

Jungle Science and the Future of Conservation by Mireya Mayor

A Poison for Assassins and Tiny Fireworks by Deborah Blum

“Why Do We Have to Learn This Stuff?”—A New Genetics for 21st Century Students by Rosemary J. Redfield

Darwin, Darwinism, and Uncertainty: book review by Matt Young

You’re Not as Happy as You Think You Are, Behavioral Scientists Report by Thomas Hayden

Strange sounds: How the brain makes sense of degraded speech by Julia Erb

Do We Need “Evolutionary Medicine”? by Harriet Hall

What the Germs in Your Bellybutton Say About You by Jason Tetro

Just a Reminder by Mike Haubrich

Night Shift by Rob Dunn

When Killer Whales Attack by Kieran Mulvaney

Voyager 1: The Little Spacecraft That Could by Amy Shira Teitel

Marriage is a tool society uses to reproduce by Greg Laden

Supplements: Something Smells Fishy by Cassandra Willyard

Cost of scientific research – and political naivity by Ken Perrott

The time has come: public participation in science policy making. and Harnessing Citizen Scientists: Let’s Create a Very Public Office of Technology Assessment by Darlene Cavalier

Get to know the narwhal! by Heidi Smith

Worm kills insects by vomiting Hulk-like bacteria by Ed Yong

The Tasmanian Echidna’s Four-Headed Penis by Lucy Cooke

Why Do Flamingos Stand On One Leg? by Matt Soniak

The First Poem Published in a Scientific Journal by Maria Popova

Truth and Reconciliation for Group Selection (pdf) by David Sloan Wilson

With a snail’s help a fish transitions from dying to dead by Craig McClain

Can You Learn To Be Synaesthetic? and False Positive Neuroscience? by Neuroskeptic

The Psychologist: Vladimir Nabokov’s understanding of human nature anticipated the advances in psychology since his day by Brian Boyd

 

Media, Publishing, Technology and Society:

The Geek Poet Strikes Back by Beth McNichol

A field guide to ocean science and conservation on twitter by Andrew Thaler

How to solve impossible problems: Daniel Russell’s awesome Google search techniques by John Tedesco

Should Google and Amazon be allowed to control domains? by Mathew Ingram

Calling Dr. Google by Jeff Jarvis

Belated thoughts on the Finch Report on achieving Open Access by Mike Taylor

The ‘Busy’ Trap by Tim Kreider and Have You Fallen Into The Busy Trap? by Brad Feld and Do We All Work Too Much? And Do We Really Have a Choice? by Walter Frick

The Death and Rebirth of Television News: “All of Life is Reduced to the Common Rubble of Banality” by Steven Lloyd Wilson

The Enlightenment project could inspire our media by Matthew da Silva

What Twitter could have been by Dalton Caldwell

A manifesto for the newspaper’s public editor in the social media era by Dan Gillmor

Why Google Plus isn’t dead — well, yet by John D. Sutter

SciWriteLabs 8.3: Adjudicating the Lehrer plagiarism accusations. Plus: Do Arianna and Oprah deserve lifelong bans? by Seth Mnookin

The Great American Novel by Maria Konnikova

Of Flying Cars and the Declining Rate of Profit by David Graeber (also see reactions by Henry Farrell and Cassiodorus)

Journatic worker takes ‘This American Life’ inside outsourced journalism by Anna Tarkov

Positive signs from Wiley on open access and Dear Wiley: please use Creative Commons Attribution for your open-access activities by Mike Taylor

On Tides, Visibility, and Quiet Revolutionary Acts by Dana Hunter

The View from Nowhere Interviews Trenberth by Michael Tobis

Social Networking For Scientists – The Wiki by Christie Wilcox

Save your darlings: Blank on Blank gives new life to old tape by Adrienne LaFrance

Hooray for the Awesome Wave of Lady Scientists in Action Movies by Alyssa Rosenberg

Long-form journalism project Matter aiming for September launch by Rachel McAthy

The Predictable Comment by The Digital Cuttlefish

Dramatic Growth of Open Access by Heather Morrison

The 2012 presidential election: what voters want – the community agenda by Jay Rosen and Nadja Popovich

Website Tests How Political Opposites Actually Discuss Differences by Marissa Alioto

Sorry, Your Tweets Can Still Be Subpoenaed by Adam Martin

Why You Should Be An Open Notebook Scientist by Anthony Salvagno

Startups that Catalyze Science by Samuel Arbesman

The Scienceblogging Weekly (June 29th, 2012)

Blog of the Week:

This week’s choice was easy – March of the Fossil Penguins, written by Dr. Daniel Ksepka. What is there not to like? Penguins! Fossils! Straight from the keyboard of the leading world expert on the topic. Enjoy!

 

Top 10:

How presidential elections are impacted by a 100 million year old coastline by Craig McClain:

Hale County in west central Alabama and Bamberg County in southern South Carolina are 450 miles apart. Both counties have a population of 16,000 of which around 60% are African American. The median households and per capita incomes are well below their respective state’s median, in Hale nearly $10,000 less. Both were named after confederate officers–Stephen Fowler Hale and Francis Marion Bamberg. And although Hale’s county seat is the self-proclaimed Catfish Capitol, pulling catfish out of the Edisto River in Bamberg County is a favorite past time. These two counties share another unique feature. Amidst a blanket of Republican red both Hale and Bamberg voted primarily Democratic in the 2000, 2004, and again in the 2008 presidential elections. Indeed, Hale and Bamberg belong to a belt of counties cutting through the deep south–Mississippi, Alabama, Georgia, South Carolina, and North Carolina–that have voted over 50% Democratic in recent presidential elections. Why? A 100 million year old coastline….

The Curious Case of the Poisoned Cows by Deborah Blum:

On a bright morning in early June, a Texas rancher named Jerry Abel turned his small herd of cattle out to graze. The 18 cows moved hungrily into that field of fresh grass. Within a few hours, only three were still alive. Abel’s 80 acre ranch sits just a little east of Austin and the story was strange enough that on Sunday a local CBS affiliate picked it up. “There was nothing you could do,” Abel told KEYE about his desperate efforts to save the animals. “Obviously, they were dying.”…

In the Steps of a Hungry Acrocanthosaurus by Brian Switek:

Compared to mounted dinosaur skeletons, fossil footprints might seem like mundane objects. They only record one small part of a fantastic creature, and it is harder to envision a whole dinosaur from the ground up than the wrap flesh around a skeletal frame. But we should not forget that dinosaur footprints are fossilized behavior—stone snapshots of an animal’s life. And sometimes, trackways record dramatic moments in dinosaur lives….

When It Comes to Numbers, We’re All Late Bloomers by Elizabeth Preston:

Good news for aspiring jelly-bean jar estimators who are under 30! Your intuitive grasp of numbers may not have peaked yet. Unlike other cognitive skills, the ability to approximate keeps improving well into adulthood. Since the skill is tied to mathematical smarts, this news might bring hope to struggling students….

Summer of Smoke by Christie Aschwanden:

June 8, 2012, Cedaredge Colorado—It was an ordinary Friday afternoon. I was at my desk writing when I looked out the window and saw an enormous plume of smoke billowing from the back of our property. It was the kind of moment when you’re supposed to remain calm and remember all the wise things you learned in first aid class or girl scouts. (Stop! Drop! Roll!) Instead, I panicked.

Plague at the Siege of Caffa, 1346 by Michelle Ziegler:

The first stage of the Black Death among Europeans was said to begin with the whoosh of a Mongol trebuchet. Gabriele De’ Mussi, a lawyer from near Genoa writing in about 1348, is believed to have recorded the account of the earliest use of plague as weapon of war at Caffa in 1346….

New flu gene found hiding in plain sight, and affects severity of infections by Ed Yong:

I could write the entire genome of a flu virus in around 100 tweets. It is just 14,000 letters long; for comparison, our genome has over 3 billion letters. This tiny collection of genetic material is enough to kill millions of people. Even though it has been sequenced time and time again, there is still a lot we don’t know about it….

‘Man-sheep-dog’: inter-species social skills by Paul Keil and Greg Downey:

Paul, the lead author, interviewed sheepdog trialer Damian Wilson about his interactions with his dog, a border collie named Yandarra Whiskey. Damian and Whiskey gave Paul a demonstration of the techniques used in sheepdog competitions as they together tried to move a mob of three sheep. In a competition in New South Wales, a trainer and dog have to move three sheep who have never been herded through a difficult obstacle course, and the trainer loses points if he (or, less frequently, she) breaks from a slow, measured pace walking the course. The rules mean that the dog itself must be trained until it anticipates the sheep’s reactions, and understands, on some level, what dog and trainer, together, are trying to accomplish. Although the trialer may give commands, the dog, too, is a kind of expert….

Preview: 3-D Space Shuttle Movie Will Bring the Launch Pad to Your Living Room by Tanya Lewis:

If you missed the final launch of the Space Shuttle, or the first private spacecraft rendezvous with the International Space Station, fear not. A new documentary to be released late this year promises you a fiery, 3-D, launch-pad view of these historic flights…

A Wartime Medical Dispenser by Jaipreet Virdi:

The Napoleonic Wars brought John Harrison Curtis’ studies to a standstill, as he became one of thousands of young men conscripted to fight against Napoleonic advances towards Britain. With his medical learning in hand, Curtis enlisted in the Royal Navy in 1808, to obtain his qualifications as surgeon and extend his medical skills. Since 1745, the Royal College of Surgeons in London, Edinburgh and Dublin, and the Navy held close associations with each other as the College was responsible for examining naval surgeons for active service. To be admitted as surgeon in the navy, candidates had to obtain a certificate of competence from the College and then be subjected to a two-hour oral examination at Somerset House….

 

Special topic #1: Getting young journalists and scientists to become savvy on the Web:

#Realtalk for the j-school graduate on the first five years of your career by Ann Friedman

Young journalists don’t seem to care about the Web: Why not? by Phillip Smith

Few Tweet successes as Generation Y fails to use blog-standard tools by Elizabeth Gibney

British Ph.D. Students Don’t Tweet by Elizabeth Gibney

 

Special topic #2: Wicked Problems:

Covering Wicked Problems by Jay Rosen

Overcoming Wicked Problems by Michael Shellenberger and Ted Nordhaus

Andrew Revkin on the Super Wicked Problem of Climate Change by Amanda Frank

David Roberts on the Simple Climate Problem by Andrew Revkin

Wicked Problems by UpLook

 

Best Images:

Global Distribution of Nobel Prizes Reflects Great Shifts in Modern History [Infographic] by Scientific American Magazine

 

Best Videos:

Mathematically Correct Breakfast by George Hart

A Song About A Circle Constant by Vi Hart

Oldest Sound Recording Resurrected from Paper by Eric Olson

A Glass Act — Harry Potter Theme Played on Wine Glasses by murayu74

What does traffic have to do with fluid dynamics? by FY! Fluid Dynamics

Milestone for WINS by The Academy of Natural Sciences of Drexel University

Beautiful Black Art by Tony Barnhart

Making the Invisible Visible in Video by MITNewsOffice

How Many Men Does it Take to Pull an Astronaut Out of the Ocean? by Amy Shira Teitel

Scraps to soil: New Yorkers carry compost to Greenmarkets instead of tossing it in the trash by Laura Geggel and Virat Markandeya

Instant Egghead – Do Cosmic Rays Spark Lightning? by Phil Yam

 

Science:

Beware Stimulus Effects in Psychology by Neuroskeptic

Do cephalopods dream of aquatic sheep? and Big in Japan by Zen Faulkes

TGIPF: The Weird World of Banana Slug Sex by Cassandra Willyard

How to Spot Pseudoneuroscience and Biobunk by APS

Bad science not about same-sex parenting by Andrew Perrin

Adrenaline Junkies Look to the Moon for Great New Fix by Amy Shira Teitel

Snakes that chew their food by Andrew Durso

The Anthropocene, and the tech that might save humans by Christie Nicholson

Far out in North Carolina by Stefan Rahmstorf

Ostrich! Get your ostrich here! The man behind the Greenmarket ostrich stand by Taylor Kubota

S.O.S. Save Our Seagrass by Whitney Campbell

What does the way you count on your fingers say about your brain? by Corrinne Burns

Size and evolution by Anthony King

Madness over sea level rise in North Carolina by John Bruno

How Will Global Warming Affect Lizards? A Detailed Physiological Study On Puerto Rican Anoles by Jonathan Losos

Seven sins of scientists part 5: snobbery by Paul Knoepfler

Tidal massaging reveals a hidden ocean on Saturn’s moon, Titan by Matthew Francis

How did the remote control get so awful and confusing? by Daniel Engber

Thoughts on Obamacare by Pal MD

Why supermarket tomatoes look great but taste bland and Exposed: the severe ethical breaches of superhero journalists and Mystery of the flatfish head solved *cough* four years ago *cough* and Why a new case of misconduct in psychology heralds interesting times for the field and Californian condor not extinct yet, but still regularly poisoned by lead by Ed Yong

Shiny! Top 10 reasons why seafarers love Joss Whedon’s Firefly by Miriam Goldstein and Craig McClain

Mysterious Fairy Circles Are ‘Alive’ by Rachel Nuwer

The Dolomite Problem – Peeking Under The Hood by Suvrat Kher

The Curse of the Lead Bullet by Deborah Blum

Should Linus Pauling’s erroneous 1953 model of DNA be retracted? by Jeff Perkel

How to trick people into eating dog food and H*MPING: Why do they do it? by Julie Hecht

The New ExxonMobil: Has the Tiger Changed Its Stripes? and A Court’s Scientific Smackdown: The D.C. Circuit Trashes Science Deniers on Global Warming and the EPA by Chris Mooney

America’s Other Audubon: A Victorian Woman’s Radical Journey of Art, Science & Entrepreneurship by Maria Popova

CDC proposes testing baby boomers for hepatitis C by Jessica M. Morrison

Climate-Studying Seals Bring Back Happy News by Elizabeth Preston

Brave New Worlds by Cameron Walker

Your Color Red Really Could Be My Blue by Natalie Wolchover

Science Denied by Phil Primack

A New Satellite Tool Tracks Deforestation by Rachel Nuwer

Sleeper Sharks Slurp Snoozing Seals by Brian Switek

The Lessons (and Echoes) of Silent Spring by Keith Kloor

The curse of the gingers by PZ Myers

The Higgs Boson is a Liberal Conspiracy To Get The Government More Involved In Mass* by Tom Levenson

Poland’s wolves trot across key wildlife overpasses by DeLene Beeland

In defense of pink microscopes by TheCellularScale

In Defense of #sciencegirlthing by Ben Young Landis

Social Justice in Animals and Animals in Visual Media by Marc Bekoff

Of wanton plants and prudish immune systems: late-night thoughts for National Pollinator Week by Leafwarbler

 

Media, Publishing, Technology and Society:

SciWriteLabs 8.1: The Lehrer affair, consequence-free plagiarism, and rules for blogging and SciWriteLabs 8.2: Is it kosher to re-use wording from Facebook updates in your journalism? And: do we need a Son of Sam law for media miscreants? by Seth Mnookin

Disrupting journalism education, too by Jeff Jarvis and Disrupting education by Dave Winer

Open Notebook Series: What is an Open Notebook? by Anthony Salvagno

Genius writing – or can a good lab journal help you become smarter? by Eric-Wubbo Lameijer

On Blogging, Direction And Ben Radford’s “Still Skeptical of Blogs” by Kylie Sturgess

Launching version 2.2: Twitter Integration by ScienceSeeker

A bad bad week for access by Richard Smith

Social Networking Concept May Have Emerged During Renaissance, Researchers Say by Tara Kelly

Wellcome Trust will penalise scientists who don’t embrace open access by Alok Jha

Shaking Up Israel’s National Archives: A conversation with Israel’s new chief archivist by Yair Rosenberg

Google’s One-Gender-Fits-All T-Shirts Don’t Fit by Ryan Tate

Library of Congress Acquires Carl Sagan Papers by Audrey Fischer

Putting People at the Center of Journalism by Josh Stearns

How do you tell when the news is biased? It depends on how you see yourself by Jonathan Stray

All A’Twitter: How Social Media Aids in Science Outreach – Discussion and Conclusions by Caitlyn
Zimmerman

Did you just tell me to go fuck myself? by Ian Mulvany

Scientists On Twitter: 30 Biologists And Chemists To Follow by Rebecca Searles

Measuring and Visualizing Interdisciplinarity by Samuel Arbesman

Why Porn and Journalism Have the Same Big Problem by Jordan Weissmann

Can you go on the press release diet? A 12-step program by Denise Graveline

How the New York Times technology blog, Bits, perpetuated the myth of a mental illness due to mobile phone use: Or, Follow the money by Les Posen

The Scienceblogging Weekly (June 22nd, 2012)

Blog of the Week:

Like clockwork, almost every day for more than two years, Tommy Leung and Susan Perkins bring you Parasite of the Day. Sometimes gross, but always fascinating. And considering how most of us don’t pay much attention to parasites these days, there is something cool to learn every single day.

 

Top 10:

The only good abortion is my abortion by Maggie Koerth-Baker:

…Of course, we don’t call it an abortion. We call it “a procedure” or a D&C. See, my potential abortion is one of the good abortions. I’m 31 years old. I’m married. These days, I’m pretty well off. I would very much like to stay pregnant right now. In fact, I have just spent the last year—following an earlier miscarriage—trying rather desperately to get pregnant…

Defending Jonah Lehrer by Bradley Voytek (about criticisim of neuroscience, not “self-plagiarism”):

Cognitive neuroscience grew out of experimental psychology, which has decades of amazing observations to link psychology and behavior. But with this legacy comes a lot of baggage. Experimental psychologists observed that we have the capacity for memory, attention, emotion, etc. and they sought to piece those phenomena apart. With the advent of neuroimaging techniques, psychologists put people in brain scanners to see where in the brain behaviors “were”. But this is the wrong way of thinking about these concepts.

The genius myth by Zen Faulkes:

…This myth of destiny and inevitable triumph of genius is, to me, completely the opposite of what science is. The scientific method leveled the playing field for discovering truth. Anyone could follow the methods and get to the bottom of things, so truth was no longer subject to tricky things like personal revelation….

Climate change is simple: We do something or we’re screwed by David Roberts:

…The challenge I took on was to convey the gist of my “brutal logic of climate change” post in a reasonably short amount of time, using as little scientific jargon as possible. Just: there is a problem that calls for urgent action. Business-as-usual means disaster. This is all gloom and doom — not even much humor. I know that turns people off or shuts them down. I know people need to feel a sense of hope and efficacy. I know — indeed, have recently been writing — that we need a vision of a sustainable future. But I needed to do my own version of “Danger Will Robinson!” Just to get it on the record…

Tunes without composers: music naturally evolves on DarwinTunes by Ed Yong:

…The tunes embedded above weren’t written by a composer, but fashioned through natural selection. They are the offspring of DarwinTunes, a program which creates bursts of noise that gradually evolve based on the preferences of thousands of human listeners. After hundreds of generations, tracks that are boring and grating soon morph into tunes that are really quite rhythmic and pleasant (even if they won’t be topping charts any time soon)….

Snake-eating beetles by Andrew Durso:

So little is known about the parasites of snakes that we tend to discount them all together, but the ecological and evolutionary interactions between hosts and their parasites can be very strong. This is a story about how two enterprising snake biologists solved a mystery that had been puzzling entomologists for decades…

Test-Tube Piggies: How did the guinea pig become a symbol of science? by Daniel Engber:

…To call someone or something a guinea pig may suggest a mere experiment (“Joe Biden was put out as a guinea pig for the White House”), or it can invoke the specter of exploitation (the U.S. Army wanted “to use young men as guinea pigs and throw them away”). The image either describes the scientific process or condemns it. It’s a totem or a scarecrow. What makes this wording more curious is the fact that guinea pigs, real ones, don’t mean much to working scientists. For all their rhetorical importance, the animals scarcely register in the lab…

What’s changed in evolution and ecology since I started my Ph.D. by Jeremy Yoder:

Last month, I filed my PhD dissertation, bringing to an end an intellectual and personal journey that began seven years ago in the summer of 2005. I know a lot more now than I did then, and I know a lot more about the boundaries of what I don’t know, too. But not only has my knowledge changed—evolution and ecology looks a lot different now than it did seven years ago when I was planning my dissertation research. At some point, and often multiple points, in the process of getting a PhD, everybody wonders whether what they’re doing is already out of date. Some of the transformations in the field I think I could see coming. For instance, it was clear in 2005 that computational power would keep increasing, phylogenetics would be used more and more to ask interesting questions, more and more genomes would be available for analysis, and evolutionary developmental biology was on the rise. It was unfortunately also predictable that it would be possible to study climate change in real time over PhD-length timescales. And although the 2008 global financial crisis didn’t help, it was clear that funding and jobs were going to be more competitive than they had been for our predecessors….

Drawing sharp boundaries in a fuzzy world by Chris Rowan:

Humans are natural splitters. We have an innate tendency to look at the world and mentally sort everything into different categories, and grades, and entities: this is one thing, that is another; it was this, now it’s that. Our perception of colour is a good example of how our brains automatically split a continuum into discrete boxes. We’ve incorporated our love of classification deep into science, trying to formalise and quantify the dividing lines we want to draw on everything: it’s this when conditions A and B are met, it’s that when we see Y and Z. But nature doesn’t often make it easy for us to draw our sharp dividing lines….

Why the Scientist Stereotype Is Bad for Everyone, Especially Kids by Michael Brooks:

To many – too many – science is something like North Korea. Not only is it impossible to read or understand anything that comes out of that place, there are so many cultural differences that it’s barely worth trying. It’s easier just to let them get on with their lives while you get on with yours; as long as they don’t take our jobs or attack our way of life, we’ll leave them in peace…

 

Special topic #1: Science: It’s a Girl Thing

“Science: It’s a Girl Thing”: Lab Barbie, Extra Lipstick by Maryn McKenna

Hey girl! Science wants YOU – but don’t forget the lipstick by Gozde Zorlu

Girls! Be A Scientist! You too Can Dance in the Lab in High Heels! by Deborah Blum

Friday Sprog Blogging: You’ve made it clear “it’s a girl thing,” but is “it” science? and Science For Princesses and How do we make room for pink microscopes? (More thoughts on gendered science kits.) by Janet D. Stemwedel

#sciencegirlthing: the PR guy’s take by David Wescott

E.U.’s ‘Science, it’s a girl thing’ campaign sparks a backlash by Olga Khazan

Science – It’s a Girl Thing (Insert Facepalm Here) by Carin Bondar and Joanne Manaster

Why “Pinkifying” Science Does More Harm Than Good by Noisy Astronomer

Hey Science, “How YOU doin’?” by Summer Ash

 

Special topic #2: Turtles

Turtle Anatomy, in Stunning Images from 1820 by Maria Popova

Galápagos Monday: Lynn’s Tortoises by Galápagos Monday: Lynn’s Tortoises

Terrifying sex organs of male turtles by Darren Naish

Turtles Have Horrifying Penises by Erin Gloria Ryan

Sex locked in stone: Fossil turtle pairs provide first direct evidence of prehistoric vertebrate mating. by Brian Switek

What Remains in the Rock by Brian Switek

Friday Weird Science: Why, you DIRTY LITTLE HERPS! by Scicurious

Preserved in the Act and Fossilized Turtle Whoopie by Craig McClain

 

Best Videos:

Eating on a Green Roof: New York’s Buildings Provide Food, Habitat for Wildlife by Rachel Nuwer, Chris New and Brennan Kelley

How do Spaceships Landing in Water Not Hit Boats? by Amy Shira Teitel

Must-watch video on rip currents by Miriam Goldstein

Whale Rainbow by rsean9000

Charged Gold Nanoparticles “Unzip” DNA by N.C.State

World Science Festival Fascinates With Robotic Animals, World’s Lightest Material, Quantum Levitation by Cara Santa Maria

 

Best Images:

Human Microbiome Project by Perrin Ireland

Greek octopus forms coalition with dolphin’s genitals by Rowan Hooper

 

Science:

The Difference Between Science ‘Skills’ and ‘Knowledge’ by Emily Richmond

How To Stop Science Alienation Syndrome by Deborah Blum

How to Determine If A Controversial Statement Is Scientifically True by Alan Henry

Numeric Pareidolia and Vortex Math by MarkCC

Tech-Based Dollhouse Inspires Future Girl Scientists by Kellie Foxx-Gonzalez

Med Student Rescues Body Part From Airport Security by Robert Krulwich

Things I Learnt from my (Unscientific) Experiences with Crowdsourcing. by David Ng

In Defense of Genetically Modified Crops by Sarah Zhang

When Did Americans Lose Their British Accents? and Why Do People Feel Phantom Cellphone Vibrations? by Matt Soniak

NASA Astronauts Brought Playmates to the Moon and Valentina Tereshkova Was the First Woman in Space and NASA and FAA Agree on the Future of Spaceflight and Vintage Space Fun Fact: NASA’s Canadian Contingent and Mars Rover Curiosity’s Retro Parachute by Amy Shira Teitel

Brains are Different on Macs by Neuroskeptic

Putting Fear In Your Ears: What Makes Music Sound Scary by Jessica Stoller-Conrad

Former Quantitative Trader Spurns Wall Street to Explore the Final Frontier by Patrick Clark

Can Anoles With Differently Shaped Genitals Interbreed? and Territorial And Thermoregulatory Behavior Of Sri Lankan Otocryptis Lizards by Jonathan Losos

How can scientists communicate to the public if they can’t even explain their work to each other? by Maggie

On this Father’s Day, let’s remember the allofathers, too by Emily Willingham

Are Fathers an Endangered Species? by Paul Raeburn

A shot to the head by Vaughan Bell

Get Ready, Because Voyager I Is *This Close* to Leaving Our Solar System by Rebecca J. Rosen

Does All Wine Taste the Same? by Jonah Lehrer

The Blind Spot: A Requiem by Megan Garber and Driving without a Blind Spot May Be Closer Than It Appears by Rachel Ewing

Notebooks Shed Light on an Antibiotic’s Contested Discovery by Peter Pringle

10-year-old solves science riddle and co-authors paper by Jon White

Keeping strong during a long winter nap by Zen Faulkes

What did Galileo ever do to you? by Ken Perrott

End the macho culture that turns women off science by Athene Donald

What’s in a (Gene) Name? by Hillary Rosner

Darwin, Worm Grunters, and Menacing Moles by Anthony Martin

Growing Up on Zoloft – Talking Drugs, Depression, and Identity With Katherine Sharpe by David Dobbs

ANAL CONES! Diadematid sea urchin mysteries! and Follow up on the Anal Cone! (thanks to the New Scientist) by Christopher Mah

How to find good sperm by Kristian Sjøgren

It has long been a mystery why flamingos in captivity suffer foot lesions. A Danish study now claims to have solved a part of this mystery. by Jeppe Wojcik

Black bears show counting skills on computers by Matt Bardo

DIY biology by Laura H. Kahn

Same Old Story: Too Many Graduate Students by Rob Knop

Scientists Find Weak Evidence That Unhealthy Lifestyles Lead to Weak Sperm by Allie Wilkinson

Sound Scholarly Communication by David De Roure

Sports doping, Victorian style by Vanessa Heggie

Welcome to the Anthropocene by David Biello

Goat Moms Recognize Their Kids Saying “Ma!” and The Shambulance: Ionic Foot Detox Baths by Elizabeth Preston

Thoughts on Tarbosaurus, Part 1. and Part 2 by Victoria Arbour

An Abstemious Home by Jessa Gamble

Crowdfunding: It’s not a grant … or is it? by Rebecca Rashid Achterman

The monthly ring: Expanding HIV prevention options for women by Dr. Zeda Rosenberg

Experiments hint at a new type of electronics: valleytronics and Quantum fluctuations may uncover a clue to high-temperature superconductivity by Matthew Francis

Reinventing the Wheel by Meagan Phelan

When Mammals Ate Dinosaurs by Brian Switek

The Rise of the Fork: Knives and spoons are ancient. But we’ve only been eating with forks for a few centuries. by Sara Goldsmith

‘Silent Spring’ is 50. The Credit, and the Blame, It Deserves. by David Ropeik

As America grows more polarized, conservatives increasingly reject science and rational thought by Amanda Marcotte

In the year 2023, and humans are on Mars for all to see by Kevin Orrman-Rossiter

Scalia’s Republican Brain: Why He’ll Come Up With a Reason to Overturn the Healthcare Mandate by Dylan Otto Krider

Does art-from-science really add anything? by Jon Butterworth

Prairie Ridge Ecostation by Christine L. Goforth

Let’s not get carried away by Markus Pössel

 

Media, Publishing, Technology and Society:

The Slow Web by Jack Cheng

Using Storytelling in Blogs by Maximilian Majewski

I’ll ask the questions here! by M.S.

Lawyer attacking The Oatmeal shocked by big mean Internet’s reaction and Lawyer tries and fails to shut down The Oatmeal’s charitable fundraiser by Casey Johnston and The Oatmeal v. FunnyJunk, Part IV: Charles Carreon Sues Everybody by Ken and The Guy Continues to Mess With The Oatmeal by Kevin Underhill and Funnyjunk’s Lawyer Charles Carreon Just Keeps Digging: Promises He’ll Find Some Law To Go After Oatmeal’s Matt Inman by Mike Masnick

Journalism education cannot teach its way to the future by Howard Finberg and Why Professors Value Journalism Degrees More Than Professionals (Beyond the Obvious) by Carrie Brown-Smith

How would you engage the community in a vagina discussion? by Steve Buttry

Socialising Research: How to get your research results noticed and used. by Jo Hawkins

All A’Twitter: How Social Media Aids in Science Outreach – Chapter 11: Set of Best Practices for Social Media Use by Caitlyn Zimmerman

Teachers and Administrators, Don’t Be Scared of Technology: It Won’t Replace the Classroom by Jody Passanisi and Shara Peters

Is it ok to get paid to promote Open Access? by John Dupuis

Pay attention to what Nick Denton is doing with comments by Clay Shirky

Watergate mythology invites pushback, ignores journalism’s messy nature by Andrew Beaujon

Why Women Still Can’t Have It All by Anne-Marie Slaughter and No One ‘Has It All,’ Because ‘Having It All’ Doesn’t Exist by Lindy West

When Twitter Stumbles, Sites Across the Web Go Down With It by Alexander Furnas

Open Access and Science Communication. Reflections on the need for a more open communication environment by Alessandro Delfanti

A step-by-step approach for science communication practitioners: a design perspective by Maarten C.A. van der Sanden and Frans J. Meijman

Does the technical staff at the World Health Organization (WHO) tweet? by Nina Bjerglund

An Open Letter To Conference Organizers and Panel Moderators by Sean Bonner

Twitterror by Oliver Reichenstein

To create a new social network or not to? Scientists weigh in. by Upwell

The Perfect Technocracy: Facebook’s Attempt to Create Good Government for 900 Million People and Inside Google’s Plan to Build a Catalog of Every Single Thing, Ever by Alexis Madrigal

Why Pen Names Might Be a Bad Idea for Most Bloggers by Ryan Matthew Pierson

Blogging relieves stress on new mothers by Victoria M Indivero

Should We (And Can We) Regulate What We Do Not Understand? by Kathleen Wisneski

Scholars are quickly moving toward a universe of web-native communication by Jason Priem, Judit Bar-Ilan, Stefanie Haustein, Isabella Peters, Hadas Shema, and Jens Terliesner

Bill Marriott: Chairman of the Blog by Michael S. Rosenwald

Apps I Want to Go Away by Sam Grobart

Some Thoughts on Peer Review and Altmetrics by Ian Mulvany

 

Extra: On the Finch report on Open Access:

Open access is the future of academic publishing, says Finch report by Alok Jha

The Finch Report on open access: it’s complicated by Stephen Curry

First thoughts on the Finch Report: Good steps but missed opportunities by Cameron Neylon

U.K. Panel Backs Open Access for All Publicly Funded Research Papers by Kai Kupferschmidt

Finch Report, a Trojan Horse, Serves Publishing Industry Interests Instead of UK Research Interests by Stevan Harnad

 

Extra: On the “self-plagiarism” saga:

On science blogs this week: Jonah Lehrer by Tabitha M. Powledge

Jonah Lehrer: The issues are simple by Paul Raeburn

This Week in Review: The potential of Microsoft’s Surface, and keeping blogging ideas fresh by Mark Coddington

Jonah Lehrer, Hypertext Author by Dorian Taylor

Jonah Lehrer “Self-Plagiarism” Brouhaha is Crap by Matthew E May

New Journalistic Workflow by Bora Zivkovic

Blogging and recycling: thoughts on the ethics of reuse. by Janet D. Stemwedel

How Jonah Lehrer should blog by Felix Salmon

The ethics of recycling content: Jonah Lehrer accused of self-plagiarism by Jonathan M. Gitlin

A (Partial) Defense of Jonah Lehrer by Robert Wright

The Tyranny of Novelty by Matthew Francis

Jonah Lehrer, self-borrowing and the problem with “big ideas” by Laura Hazard Owen

The Scienceblogging Weekly (June 15th, 2012)

Blog of the Week:

Russ Williams is the Director of the North Carolina Zoological Society and, as far as I know, the only “director of a zoo” who blogs. And does he ever – Russ has been blogging up a storm ever since 2005 when Ed Cone taught him how (you may call me The Blogfather, but Ed Cone is the blogfather for many of us in North Carolina). On his blog Russlings, Russ covers plenty – what is new at the N.C.Zoo in Asheboro, what is new in other zoos around the country and the world, what is new in policy and politics of animal conservation, plus cool pictures and videos of wildlife. But where the value really comes up is at the times of natural disasters – Russ is “in the know” and often the first and/or the only person to blog about the status of zoos and aquaria, as well as farm animals, wildlife preserves etc, in the affected areas. During disasters, Russlings is the Go-To place for such coverage.

 

Top 10:

How Our Disinterest in ‘The Environment’ Signals the End of Nature by Christopher Mims:

No one reading this has the slightest fucking clue what “nature” is, and in 1995 fisheries scientist Daniel Pauly proved it. In the paper that introduced the term “shifting baselines,” Pauly described how experts who determined how many fish should be caught often started with whatever the baseline state of the ecosystem was when they started their careers, instead of considering what a fishery might have looked like in the past, when it wasn’t nearly as degraded….

Getting used to being in charge of the planet by David Roberts:

…Nonetheless, like evolution, the dominance of human beings on Spaceship Earth is a profound and terrifying threat to all sorts of traditional worldviews. If Darwin showed us that God is not our author, the Anthropocene shows that He is not our caretaker. There’s no parent to supply us with endless resources and endless room to dispose of our waste. There’s no one to protect us or prevent us from screwing it all up….

Walking the Line: How to Identify Safe Limits for Human Impacts on the Planet by David Biello:

Is preserving the general environmental conditions that allowed civilization to flourish—a moderate climate, a rich array of species, rivers that reach the sea—necessary to ensure humanity endures? Or is minimizing alterations to the global environment introduced by human activity—rising levels of CO2 from fossil-fuel burning, widespread extinction, dams that impound water—more important to our success? Choosing the right approach is vital as the scale of human impact on the planet becomes so large that scientists are calling this new epoch in Earth’s history the Anthropocene (when human activity alters global climate and ecosystems)…

#GMOFAQ: Transferring genes from one species to another is neither unnatural nor dangerous by Michael Eisen:

Last week I wrote about the anti-science campaign being waged by opponents of the use of genetically modified organisms in agriculture. In that post, I promised to address a series of questions/fears about GMOs that seem to underly peoples’ objections to the technology. I’m not going to try to make this a comprehensive reference site about GMOs and the literature on their use and safety (I’m compiling some good general resources here.) I want to say a few things about myself too…

Sea level rise 101 by John Bruno:

Based on the NC legislature’s decree about the science of sea level rise projections and some of the related propaganda we have seen from climate change deniers, I get the sense there is a lot of confusion about sea level rise. So here is a primer on what we know about sea level and climate change…

Dirty soil and diabetes: Anniston’s toxic legacy by Brett Israel:

The Rev. Thomas Long doesn’t have neighbors on Montrose Avenue anymore. Everyone is gone. Widespread chemical contamination from a Monsanto plant was discovered in this quiet city in the Appalachian foothills back in the 1990s. In West Anniston, behind Long’s home, a church was fenced off, and men in “moon suits” cleaned the site for weeks. Nearby, boarded windows and sunken porches hang from abandoned shotgun houses. Stray dogs roam the narrow streets. A red “nuisance” sign peeks above the un-mowed lawn of one empty house. Bulldozers will be here soon…

Pollution, Poverty, People of Color: No beba el agua. Don’t drink the water. by Liza Gross

Jessica Sanchez sits on the edge of her seat in her mother’s kitchen, hands resting on her bulging belly. Eight months pregnant, she’s excited about the imminent birth of her son. But she’s scared too. A few feet away, her mother, Bertha Dias, scrubs potatoes with water she bought from a vending machine. She won’t use the tap water because it’s contaminated with nitrates…

The crayola-fication of the world: How we gave colors names, and it messed with our brains (part II) by Aatish Bhatia:

Lately, I’ve got colors on the brain. In part I of this post I talked about the common roads that different cultures travel down as they name the colors in their world. And I came across the idea that color names are, in some sense, culturally universal. The way that languages carve up the visual spectrum isn’t arbitrary. Different cultures with independent histories often end up with the same colors in their vocabulary. Of course, the word that they use for red might be quite different – red, rouge, laal, whatever. Yet the concept of redness, that vivid region of the visual spectrum that we associate with fire, strawberries, blood or ketchup, is something that most cultures share….

How the Chicken Conquered the World by Jerry Adler and Andrew Lawler:

The chickens that saved Western civilization were discovered, according to legend, by the side of a road in Greece in the first decade of the fifth century B.C. The Athenian general Themistocles, on his way to confront the invading Persian forces, stopped to watch two cocks fighting and summoned his troops, saying: “Behold, these do not fight for their household gods, for the monuments of their ancestors, for glory, for liberty or the safety of their children, but only because one will not give way to the other.” The tale does not describe what happened to the loser, nor explain why the soldiers found this display of instinctive aggression inspirational rather than pointless and depressing. But history records that the Greeks, thus heartened, went on to repel the invaders, preserving the civilization that today honors those same creatures by breading, frying and dipping them into one’s choice of sauce. The descendants of those roosters might well think—if they were capable of such profound thought—that their ancient forebears have a lot to answer for….

‘Sexual depravity’ of penguins that Antarctic scientist dared not reveal by Robin McKie:

It was the sight of a young male Adélie penguin attempting to have sex with a dead female that particularly unnerved George Murray Levick, a scientist with the 1910-13 Scott Antarctic Expedition. No such observation had ever been recorded before, as far as he knew, and Levick, a typical Edwardian Englishman, was horrified. Blizzards and freezing cold were one thing. Penguin perversion was another….

 

Special topic #1: stimulants in school:

The Questions About ADHD Drugs The New York Times Didn’t Ask by Matthew Herper

The labels change, the game remains the same by Vaughan Bell

The NY Times: When Stimulants Are Bad by Robert Whitaker

The Horror of Drug-Boosted Grades and SAT Scores by Jacob Sullum

Should Ritalin Be Distributed To Everyone Taking the SATs? by Gary Stix.

 

Special topic #2: Prometheus and science in the movies:

The biology of Prometheus by Zen Faulkes

The Science of Prometheus – a review, containing a lot of spoilers by Frank Swain

Prometheus: an archaeological perspective (sort of). by Henry Rothwell

Ridley Scott’s Prometheus Examines the Roots of Alien’s Mythology by Larry Greenemeier

‘Prometheus’ Offers a Creationist Indulgence for Science Geeks by James Gorman

Prometheus: what was that about? Ten key questions by Ben Walters

Stealing fire by Zen Faulkes

Space: The Science of Prometheus by Discovery News

What’s Wrong With Prometheus (a Partial List) by Julian Sanchez


Best Videos:

Instant Egghead – What Causes Brain Freeze? by Ferris Jabr and Eric Olson

The Fabulab’s Flame Challenge by Jeanne Garbarino, Perrin Ireland and Deborah Berebichez

Curly Haired Mafia – Prometheus SPOILERS!!! (video) by Lali DeRosier, DNLee and Dr.Rhubidium


Best Image:

UCD worker wins award for rare photo of bee sting in action by Andrea Gallo


Science:

Sensory Ecology of the Third Eye by Ashli Moore

Lovely Lysenko by Dominic Berry

Assuming the Doctor’s a ‘He’ by Danielle Ofri, M.D.

Why We (Accidentally) Name Babies for Hurricanes by Elizabeth Preston

What is a vagina? by Emily Willingham

Imaginary Numbers are Real by Matthew Francis

Curious Experiments by Archbishop Marsh’s Library. “‘Curious Experiments’ for ‘The Amusement and Entertainment of Ladies, as well as Gentlemen’ which took place before a paying audience in Dublin in 1743.” recreated by high school students 270 years later.

Crowdfunding: A New Opportunity for Science and Innovation by John R. Platt

Old Books that Guided Science by Samuel Arbesman

Why you probably won’t experience your own traumatic death by George Dvorsky

June Gloom by Cameron Walker

Dear Slate: America Needs More Artists by See Arr Oh

Negative results and dodgy papers: keep quiet or publish? by Tom W. Phillips

Our Animal Natures by Barbara Natterson-Horowitz and Kathryn Bowers

‘I’m Not Your Wife!’ A New Study Points to a Hidden Form of Sexism by Gayle Tzemach Lemmon

Achtman on Plague Evolution by Michelle Ziegler

Would You Call Me A Scientist? by Sheril Kirshenbaum

Visiting “Brains. The Mind as Matter” at the Wellcome Collection by The curious neuron

Food Trade Too Complex to Track Food Safety by Maryn McKenna

The Johannes Kepler Defense by Romeo Vitelli

Taking the colour out of light. by Thony C. “The man who didn’t invent the achromatic lens” John Dollond born 9 June 1706.

Carnivorous plants respond to increased soil nitrogen, eco-news websites completely miss the point by Andrew Thaler

Virginia Lawmaker Says ‘Sea Level Rise’ Is A ‘Left Wing Term,’ Excises It From State Report On Coastal Flooding by Rebecca Leber

Teaching Neuroanatomy With A Showercap by Neuroskeptic

Fungus Inside Us: A New Health Frontier? by Brandon Keim

The Top Ten Strangest Self-Experiments Ever by Alex Boese

G r e a t e r / l e t t e r / s p a c i n g / helps reading in dyslexia by The Neurocritic

Dangerous Interventions: MMS and Autism by Emily Willingham

Cholera vaccine deployed to control African outbreak by Gozde Zorlu

Bath salts and… zombies? by Donna

You Don’t Have What it Takes by Lucy E. Hornstein MD

What they didn’t tell you about the transit of Venus by Rebekah Higgitt

Science Outreach: What Do You Need? by Matt Shipman

Double Xpression: Liz Neeley, Science Communicator Extraordinaire by Jeanne Garbarino

Overeating Makes Flies Obese, Diabetic, Dead by Elizabeth Preston

Creationism Uses Dinosaurs to Lure Kids Into Radical Ideas, But Scientists Should Not Care Too Much by Cameron English

No, America Does NOT Need More Scientists and Engineers by Derek Lowe

Plant uses chemical weapons to make mice spit out its seeds and To control cannibal toads, you just need the right bait and Fear of spiders changes bodies of grasshoppers and makes plants decay more slowly and Microbial Menagerie and Male spider castrates himself and gets more stamina by Ed Yong

Where have I been? Or, science outreach’s place in science. by Lauren Meyer

The culinary adventures of a cuttlefish by Jonas

Science Communication: A sort-of-kind-of Carnival, and some more thoughts of mine by Scicurious

Scientists map ‘Facebook for birds’ by Alan Boyle

Double Xpression: Debbie Berebichez, PhD Physicist by Jeanne Garbarino

The anthropologist and the kurgans by John Hawks

Scientists Tackle The Geography Of Nature Vs. Nurture In Maps Of U.K. by Ted Burnham

Does Acceptance of Evolution Matter? by Ed Brayton

Did Neanderthals Produce Cave Paintings? by Sarah Everts


Media, Publishing, Technology and Society:

Sorry, Young Man, You’re Not the Most Important Demographic in Tech by Alexis Madrigal

Online Seniors: Tech-Savvier Than You Think by Frederic Lardinois

Open access to research is inevitable, says Nature editor-in-chief by Alok Jha

A Serious Look at Funny Faces by Henry Adams – on the history of cartoons.

An Anarchist Constitution for Twitter by Rebecca Greenfield

Why Twitter Matters: Tomorrow’s Knowledge Network by Nigel Cameron

Learning To Write From Chopin by Murr Brewster

An alternative to the college degree? by Amy Scott

From scrubbing floors to Ivy League: Homeless student to go to dream college by Vivian Kuo

11 dreams for the publishing debate — #1 fewer papers and 11 dreams for the publishing debate — #2 get real credit for surveys and exposition and 11 dreams for the publishing debate — #3 get real credit for refereeing and #4 get real credit for communicating and
#5 sharing all our work every way we can by Peter Krautzberger

All A’Twitter: How Social Media Aids in Science Outreach – Chapter 8: Talking with the Social Media Experts and Chapter 9: Gathering Survey Results, and Chapter 10: Coming to Conclusions by Caitlyn Zimmerman

Why the World’s Most Perfect News Tweet Is Kind of Boring by Megan Garber

Do Journo Watchers Ignore Environmental Beat? by Keith Kloor

Exhausted With The Same by Erika Napoletano

Why you should be excited about vector-based maps in iOS 6 by Tim De Chant

Pitch Perfect – a primer for scientists reaching out to journalists by Liz Neeley

Social media and Google Analytics – who’s interested in botany? by Alun Salt

Paying for information versus *access* to information: A key distinction for news publishers by Robert Niles

Please RT by n+1 editors

The Scienceblogging Weekly (June 8th, 2012)

Wow – this was hard! I could have had at least Top 20 instead of Top 10 (but you’ll find them all listed down there anyway)…

 

Blog of the Week:

Tanya Khovanova’s Math Blog is a blog by Tanya Khovanova, a Visiting Scholar and Research Affiliate at MIT, a 1976 gold medalist (and 1975 silver medalist) at the International Mathematics Olympiad. What she does the most (though there is occasionally other stuff there) is to pose difficult (and some not to so difficult) mathematical problems and puzzles for her readers to try to solve in the comments. Go ahead and give it a try yourself!

 

Top 10:

Sea Level Rise Is Tied to Prevalence of Homosexuality by Craig McClain:

Although only two years old and previously unrecognized by the scientific establishment, Global Draining (GD) has now become a widely accepted theory. GD states that sea level is falling not rising (Southern Fried Science, 2010a). Current rates of GD indicate the entire world’s ocean will be empty by 2026 (Southern Fried Science, 2010a). Local-scale observation of in situ draining combined with a robust theoretical model firmly place the rate of draining at 40 Gigatons of water per year (Dr. M, 2010). It has been argued that both one and multiple holes occur in the ocean floor that allow for GD (i.e. the monoclavis versus polyclavis hypotheses via McCay, 2010; Southern Fried Science, 2010b). However, the impacts and causes of GD are not clearly understood. Despite this, GD is a fundamental tenet of nearly every facet of science and likely correlated with many aspects of biology, economics, sociology, religion, and politics. For example, GD is likely to lead to massive die offs of sharks and reduce global atmospheric oxygen levels (Shark Diver, 2010)…

The crayola-fication of the world: How we gave colors names, and it messed with our brains (part I) by Aatish Bhatia:

In Japan, people often refer to traffic lights as being blue in color. And this is a bit odd, because the traffic signal indicating ‘go’ in Japan is just as green as it is anywhere else in the world. So why is the color getting lost in translation? This visual conundrum has its roots in the history of language…

Arsenic Life Wrap-Up: The Good, the ‘Not-So-Good’ by See Arr Oh:

“Arsenic Life,” a hot-button issue for much of the past year, reemerged this week with two new papers, one propitious, and one, well…not so much….

In defense of frivolities and open-ended experiments by Bradley Voytek:

My first child was born just about nine months ago. From the hospital window on that memorable day, I could see that it was surprisingly sunny for a Berkeley autumn afternoon. At the time, I’d only slept about three of the last 38 hours. My mind was making up for the missing haze that usually fills the Berkeley sky. Despite my cloudy state, I can easily recall those moments following my first afternoon laying with my newborn son. In those minutes, he cleared my mind better than the sun had cleared the Berkeley skies…

Women’s Work by Virginia Hughes:

I write mostly about neuroscience, genetics and biotechnology. That means I spend most of my time talking to and writing about men.

In May of 2011 (chosen arbitrarily just because it was a year ago and I’m pretty sure I wasn’t thinking about this gender gap then), 89 percent of my phone interviews were with men.

I can think of a few reasons for this…

The Mechanics and Meaning of That Ol’ Dial-Up Modem Sound by Alexis Madrigal:

Of all the noises that my children will not understand, the one that is nearest to my heart is not from a song or a television show or a jingle. It’s the sound of a modem connecting with another modem across the repurposed telephone infrastructure. It was the noise of being part of the beginning of the Internet…

I’m not a speciesist, but… by Jack Scanlan:

Is it a paradox to hate your own species? Is such a feeling the product of a broken and conflicted mind? Or could it perhaps be the signature of psychopathy? Every day these questions run through my mind and I feel guilty. Why? Well, because I do hate my own species. Homo sapiens is terrible, and I’m surprised more people don’t recognise this…

The science and ethics of voluntary amputation by Mo Costandi:

…In January 2000, the mass media ran several stories about Robert Smith, a surgeon at the Falkirk and District Royal Infirmary who had amputated the legs of two patients at their own request and was planning a third amputation. The news stories incorrectly described the patients as suffering from Body Dysmorphic Disorder. They further stated that the director of NHS trust running the hospital at which Smith works described the amputation of healthy limbs as “inappropriate”; since then, no British hospital has performed a voluntary amputation…

In Defense of Mickey Mouse Science by Byron Jennings:

…I suppose one could hook up the computers directly to the experiments and have them generate models, test the models against new observations and then modify the experimental apparatus without any human intervention. However, I am not sure that would be science. Science is ultimately a human activity and the models we produce are products of the human mind. It is not enough that the computer knows the answer. We want to have some feeling for the results, to understand them. Without the simple models, Mickey Mouse science, that would not be possible: the big news made ever so small…

From plaster to programming: How borrowed technologies are changing paleontology by Justine E. Hausheer:

In popular culture, paleontologists are like Indiana Jones. Rugged men wandering through rocky deserts, wearing wide-brimmed leather hats and multi-pocketed khaki vests. Rock-hammers hang nonchalantly from their belt-loops, maps and note-pads protrude from pockets. On a whim, they brush aside some sand to reveal a ferocious skull and massive vertebrae, and then they puzzle out the mysteries of dinosaurs just by staring at the rocks. But in contemporary science, paleontologists are biologists, computer programmers, and engineers…

 

Special topic: Scientists, Journalism and Outreach

Eh, the whole week started with The Unwritten Rules of Journalism by Adam Ruben and then the blogosphere exploded – see for yourself:

Make Me Feel Something, Please by Soren Wheeler

Will Scientists Ever Get Science Writing? by Deborah Blum

Science Careers Magazine: A platform for a funny guy who says he really hates science journalism by Charlie Petit

Keep Cool Science Journalists by Khalil A. Cassimally

Congratulations! You’re Dumb! by Matthew Francis

Science is more than freaks and circuses by Paul Livingston

A KISS for communicating science by biochembelle

Scientists Engaging With The Public: Let’s Get Started and Talking About Science: Why Do You Do What You Do? by Matt Shipman

Summary of the #ReachingOutSci Series by nature.com Communities Team

On Outreach: something’s got to give by scicurious

A Call To Arms For Young Science Journalists by Khalil A. Cassimally

Which came first, rewarding outreach or doing it? On chickens, eggs, and overworked scientists by Kate Clancy

The root of problems by Zen Faulkes

Quick thoughts on the what and why of science outreach by Cedar Riener

Where Have All the Scientists Gone? by Magdeline Lum

Why are scientists trapped in the ivory tower and what can be done to escape? by Jeanne Garbarino

Speak Up, Scientists! by Tom Bartlett

So You Want To Communicate Science Online: The Flowchart by Miriam Goldstein

Some Scattered Thoughts on Outreach Work by Eight Crayon Science

One Venus transit – but many kinds of scientific outreach by Chris Rowan

 

Best Videos:

A Wildlife Rescue Center for New York City by Rachel Nuwer, video by Kelly Slivka and Kate Yandell.

The Curious Sex Lives Of Animals (VIDEO) by Cara Santa Maria and Carin Bondar

What we didn’t know about penis anatomy (video) by Diane Kelly

CreatureCast – Ginko (video) by Casey Dunn

Fruitfly Development, Cell by Cell (video) by Joe Hanson

 

Science:

How Our Disinterest in ‘The Environment’ Signals the End of Nature by Christopher Mims

Dramatic impacts on beach microbial communities following the Deepwater Horizon oil spill by Holy Bik

I Point To TED Talks and I Point to Kim Kardashian. That Is All. by Carl Zimmer

NASA’s Manned Venus Orbital Mission and This Is What Happens When Galaxies Collide and The X-15′s First Glide by Amy Shira Teitel

North Carolina’s attempted ban on sea level rise is a boon for Global Draining researchers by Southern Fried Scientist

How Intuition and the Imagination Fuel Scientific Discovery and Creativity: A 1957 Guide by Maria Popova

Battleship Earth: Does the Pentagon have the right weapons to fight off an alien invasion? by Cara Parks and Joshua E. Keating

Is Arsenic the Worst Chemical in the World? and The Arsenic Diet by Deborah Blum

Bad Reaction: The Toxicity of Chemical-Free Claims by Sharon Hill

Peptide shows potential to reverse skin fibrosis and Turning down the heat revs up brown fat by Kathleen Raven

Mermaids Embodies the Rotting Carcass of Science TV and Time for a Dinosaur Attack? by Brian Switek

David Dobbs and science storytelling: Lost in your brain. by Paul Raeburn

Piscine Geriatrics and Update on the iFish by whizbang

“HULK SMASH GM” – mixing angry Greens with bad science by Martin Robbins

For an Isolated Tribe, Time Follows the Terrain, and the Future is Uphill by Valerie Ross

Turning Scientific Perplexity into Ordinary Statistical Uncertainty by Cosma Shalizi

Credible Amelia Earhart Signals Were Ignored by Rossella Lorenzi and More Amelia Earhart Nonsense by Brian Dunning

“How do you feel about Evidence-Based Medicine?” by Harriet Hall

Wind-aided birds on their way north by Liz O’Connell

Transit of Venus through the ages by Jonathan Nally

Attempts to predict earthquakes may do more harm than good by David Petley

Reporting Preliminary Findings by Steven Novella

What makes sea-level rise? by Stefan Rahmstorf

Detectable but not hazardous: radioactive marine life of Fukushima by Miriam Goldstein

Elaine Fuchs: “There’s no comfortable route for a scientist” by Rachel Zwick

Why the GOP distrusts science and Conservatives Attack Scientific Findings About Why They Hate Science (Helping to Confirm the Science) by Chris Mooney

Jumping Vampire Spiders Choose Victims by Headwear and Why You Can’t Kill a Mosquito with a Raindrop and Rare Blooms by Elizabeth Preston

To study vampire spiders, build Frankenstein mosquitoes and Cockroaches and geckos disappear by swinging under ledges… and inspire robots and Giant insects disappeared thanks to falling oxygen levels and agile birds and Bacteria turn themselves into living electric grids by sending currents down mineral wires and How to weigh dinosaurs with lasers and Will we ever… clone a mammoth? by Ed Yong

New species are found all the time, even in Europe. by Tim Parshall

Sunday morning musings by PalMD

Winning the climate culture war and The top five things voters need to know about conservatives and climate change by David Roberts

Genetic Modification – What’s the big deal? by Donna

Cancer on the Brain by David Ropeik

Learning by Making: American kids should be building rockets and robots, not taking standardized tests. by Dale Dougherty

“Arsenic bacteria”: If you hadn’t nailed ‘im to the perch ‘e’d be pushing up the daisies by Ashutosh Jogalekar

BP Demands Scientist Emails in Gulf Oil Spill Lawsuit by Brandon Keim

Will Lex Luthor save North Carolina from climate change? by Michael Yudell

Coordinated Hunting in Red Devils by Craig McClain

Use it or lose it? by Levi Morran

Natural voyeurism: Animal webcams make peeping Toms of us all by Kelly Slivka

Why We Don’t Believe In Science by Jonah Lehrer

Mermaids do not exist, and five other important things people should, but do not, know about the ocean by WhySharksMatter

Transits of Earth from Other Planets by John Rennie

Bend me, shape me: flexible electronics perform under punishing conditions by Matthew Francis

The Invasivore’s Dilemma by Michelle Nijhuis

Beware Of The Branches: The Impacts Of Habitat Structure On Locomotion And Path Choice by Timothy Higham

Science Hubris, or Shame on You, Mayim Bialik by Lucy E. Hornstein MD

Your guide to zombie parasite journalism by Carl Zimmer

Science Gallery Pushes Art With A Social Conscience by Lucas Kavner

This Is Your Quail on Drugs, Behaving Badly by Neda Semnani

Making neuroscience public: Neurohype, neuroscepticism and neuroblogging by Brigitte Nerlich

Dictators Turn Strangely Benevolent in Online Game by Dave Mosher

The Platypus Fallacy. by T. Ryan Gregory

What You Know About the Difference in Dolphins and Porpoises is Wrong by SoundingTheSea

Has the public’s understanding of science devolved into a perverse worship of uncertainty? by Pamela Ronald

Darwin’s ‘clumsy’ prose by Angelique Richardson

Life and science challenges: flames, Hawkeye, the needle and the damage done by Jeanne Garbarino

Mars One: The Martian Chronicles or Big Brother Live on Mars? by Danica Radovanovic

Driving without a Blind Spot May Be Closer Than It Appears by Rachel Ewing

I love waking up to bad science in the morning paper by Rachel Felt

Interloper of the Venus Transit by Phil Plait

Brian: The Typographical Error that Brought Early Career Neuroscientists and Artists Together by Megan J. Dowie, Erin Forsyth and Leah Forsyth

How can I stop…… stammering? by Stuart Farrimond

Identical Twins, Different Lives by Neuroskeptic

That Antidepressants In Water Cause Autism Study by Neuroskeptic, and Fish, Antidepressants, Autism and a Problematic Research Premise by Dorothy Bishop, and Taking the Bait: A Fish (and autism) Story by Deborah Blum

Zombies are not a health problem (for us). Should they be a solution? by Jonathan Purtle

Portrait of the Archaeologist as Young Artist by Heather Pringle

Building a Shadow CV by Jacquelyn Gill

WHO adopts global vaccine action plan by Gozde Zorlu

The Republican Brain: The perils and promise of taking a stand. by Paul Raeburn

N. Carolina Senate decides to include science in sea level projections after all by John Timmer

 

Media, Publishing and Technology:

Lessons in blogging (and tweeting) from Samuel Pepys by Justin Ellis

Social Networks Over Time and the Invariants of Interaction by Samuel Arbesman

This I believe about journalism, newspapers and the future of media by Tim J. McGuire

Beyond citations: Scholars’ visibility on the social Web by Judit Bar-Ilan, Stefanie Haustein, Isabella Peters, Jason Priem, Hadas Shema and Jens Terliesner

Wi-Fi and Amtrak: Missed Connections by Ron Nixon – obviously written by someone who’s never boarded anything but Acela, which is notorious for bad wifi. I find wifi perfectly usable on the Carolinian route of Amtrak.

The North West London Blues by Zadie Smith

SPARC Open Access Newsletter, issue #164 by Peter Suber

Facebook will sell me to you, and you to me by Scott Rosenberg

A brief history of Car Talk: “They’ve changed the way people see public radio in America” by Andrew Phelps

Ebook revolution can kindle a passion for publishing by Ed Victor

My Gettysburg oration: A vision for journalism that can long endure by Steve Buttry

All A’Twitter: How Social Media Aids in Science Outreach – Chapter 6: Struggles of Facebook for the Multipurpose Marine Cadastre and Chapter 7: Survey Design by Caitlyn Zimmerman

Not a fan of the big Bitly revamp? Here are 9 alternatives by Nancy Messieh and A little free advice for Bitly by Dave Winer

Added Value: I do not think those words mean what you think they mean and 25,000 signatures and still rolling: Implications of the White House petition by Cameron Neylon

Sustainable quality by Dan Conover

Revisiting the View from Nowhere by John L. Robinson

How Writing A Science Blog Saved My PhD and 3 Mandatory Tools For Digital Scientists by Julio Peironcely

How the Internet Became Boring by Christopher Mims

“Dear Author” by Ted C. MacRae

What Is a Blog Post? by Rob Jenkins

Startup Culture: Values vs. Vibe by Chris Moody

Ask TON: Organizing notes by Jeanne Erdmann and Siri Carpenter

Why Reporting Is Ripe For Innovation by Vadim Lavrusik

Guys! I Have the Next Big Thing: A Social Network for Hermit Crabs by Alexis Madrigal

Arianna Huffington says HuffPo’s ‘sideboob’ news page is meant as a joke by Ruth Spencer

Does your newsroom have a smart-refrigerator strategy? by Adrienne LaFrance

How to improve environmental coverage? by Curtis Brainard

10 Timeframes by Paul Ford

It’s a Googly World: A Map of the Planet’s Most Visited Websites by Country by Rebecca J. Rosen

Twitter Gives you the Bird by Armin and Twitter’s new bird logo by Dave Winer

The great newspaper liquidation by Jack Shafer

The Scienceblogging Weekly (June 1st, 2012)

Blog of the Week:

Vintage Space is a blog by Amy Shira Teitel, science writer and historian of space exploration living in Arizona. She has been busy lately, contributing articles to Discovery News, Motherboard, Spaceflight Observer podcasts, Scientific American Guest Blog, Soapbox Science blog, Timeline Magazine, AmericaSpace and Universe Today, among else. Vintage Space is her writing laboratory, where she first explores topics she may subsequently expand into longer pieces for other venues. And she links to all of her articles as they go live in various places so you can keep up with her prolific output. Those of you regular readers of Scientific American blogs may remember her guest posts, and for those of you not familiar, those can give you the taste of her fascinating forays into the history of space: Sky Crane – how to land Curiosity on the surface of Mars and Apollo 1: The Fire That Shocked NASA and John Glenn: The Man Behind the Hero.

Top 10:

Nicotine and the Chemistry of Murder by Deborah Blum:

The 1850 murder of Gustave Fougnies in Belgium is not famous because of the cleverness of his killers. Not at all. They – his sister and brother-in-law – practically set off signal flares announcing their parts in a suspicious death.

It’s not famous because it was such a classic high society murder. The killers were the dashing, expensive, and deeply indebted Comte and Countess de Bocarmé. The death occurred during a dangerously intimate dinner at their chateau, a 18th century mansion on an estate in southern Belgium.

Nor it is remembered because the Comte died by guillotine in 1851 – so many did after all.

No, this is a famous murder because of its use of a notably lethal poison. And because the solving of this particular murder changed the history of toxicology, helped lay the foundation for modern forensic science. The poison, by the way, was the plant alkaloid nicotine….

Richard Dawkins, Edward O. Wilson, and the Consensus of the Many by David Sloan Wilson:

…I mean Dawkins and Wilson no disrespect by calling them two among many. I trust that they would agree and would defer to others especially when it comes to mathematical models, which is not their area of expertise. If the public is going to become literate on the issues at stake—as well they should, because they are fundamental to the study of human sociality—then they will need to realize that both Wilson and Dawkins get some things right and other things wrong. Moreover, the entire community of scientists is in more agreement than the infamous exchange in Nature seems to indicate. Taking the argument from authority seriously can lead to a breakthrough in the public’s understanding of social evolution. …

The protein makes the poison: Dancing fruit flies and terfenadine by Ashutosh Jogalekar:

…Dose-specific toxicity is indeed of paramount importance in medicine, but if you delve deeper, the common mechanism underlying the toxicity of many drugs often has less to do with the specific drugs themselves and more to do with the other major player in the interaction of drugs with the human body – proteins. Unwarranted dosages of drugs are certainly dangerous, but even in these cases the effect is often mediated by specific proteins. Thus in this post, I want to take a slightly different tack and want to reinforce the idea that when it comes to drugs it’s often wise to remember that “the protein makes the poison”. I want to reinforce the fact that toxicity is often a function of multiple entities and not just one. In fact this concept underlies most of the side-effects of drugs, manifested in all those ominous sounding warnings delivered in rapid fire intonations in otherwise soothing drug commercials…

The trouble with brain scans by Vaughan Bell:

Neuroscientists have long been banging their heads on their desks over exaggerated reports of brain scanning studies. Media stories illustrated with coloured scans, supposedly showing how the brain works, are now a standard part of the science pages and some people find them so convincing that they are touted as ways of designing education for our children, evaluating the effectiveness of marketing campaigns and testing potential recruits…

Cloaking the rainbow by Rose Eveleth:

Invisibility cloaks aren’t just for Harry Potter anymore. Last year, researchers made one that cloaked things in time. Now they’ve made thousands of tiny invisibility cloaks that trap a rainbow. That’s right, 25,000 invisibility cloaks trapping a rainbow. The first question you might be asking is: why? Why does it take 25,000 invisibility cloaks to trap a rainbow? Or maybe, why trap a rainbow in the first place?

An Analysis of Blaster Fire in Star Wars by Rhett Allain:

You have no idea how long I have been planning to look at the blasters in Star Wars. No idea. Finally, the 35th Anniversary of Star Wars has motivated me to complete my study (which I haven’t actually started). Here is the deal: What are these blasters? How fast are the blaster bolts? Do the blasters from the spacecraft travel at about the same speed as the handheld blasters? Why do people still think these are lasers?…

Don’t worry so much about being the right type of science role model by Marie-Claire Shanahan:

What does it mean to be a good role? Am I a good role model? Playing around with kids at home or in the middle of a science classroom, adults often ask themselves these questions, especially when it comes to girls and science. But despite having asked them many times myself, I don’t think they’re the right questions…

Evolutionary psychology: A dialogue by Jeremy Yoder:

A Biologist went down to the coffee shop one day, because the walk out to the edge of the University campus provided some brief respite from the laboratory. Along the way the Biologist encountered an Evolutionary Psychologist, who was also going to the coffee shop, and they fell to walking together…

How I Stopped Worrying (about science accuracy) And Learned to Love The Story by Phil Plait:

When I was a kid – and who am I kidding; when I was an adult too – I made fun of the science in movies. “That’s so fakey!” I would cry out loud when a spaceship roared past, or a slimy alien stalked our heroes. Eventually, my verbal exclamations evolved into written ones. Not long after creating my first website (back in the Dark Internet Ages of 1997) I decided it would be fun to critique the science of movies, and I dove in with both glee and fervor. No movie was safe, from Armageddon to Austin Powers…

The Fantastic Gliding Stegosaurus by Brian Switek:

Stegosaurus is undoubtedly one of the most perplexing dinosaurs. What was all that iconic armor for? (And how did amorous stegosaurs get around that complication?) Paleontologists have been investigating and debating the function of Stegosaurus ornamentation for decades, but without much consensus. The dinosaur’s spectacular plates were certainly prominent visual signals, but could they also have been used for regulating body temperature? Or might there be some evolutionary impetus we’re not thinking of?

 

Science:

The Anatomy of a Videogame-Scare Story by Brian Fung

My Favorite Toxic Chemical by John Spevacek:

Urban trees reveal income inequality and Home Income inequality, as seen from space by Tim De Chant

Neuroscientists should study Zombie Ants by TheCellularScale

Octopuses Host a Masterclass on Hiding by Elizabeth Preston

Toxic Carnival: Day Three and Toxic Carnival: Day Four and Toxic Carnival: Day Five by Matthew Hartings

Social Sauropods? by Brian Switek

Birds Have Juvenile Dinosaur Skulls by Brian Switek

Ecological complexity breeds evolutionary complication by Jeremy Yoder:

Fire-chasing beetles sense infrared radiation from fires hundreds of kilometres away by Ed Yong:

Crowdfunding as the future of science funding? by Anthony Salvagno

Revisiting why incompetents think they’re awesome by Chris Lee. “Dunning-Kruger study today: The uninformed aren’t as doomed as the Web suggests.”

Lost in your brain by David Dobbs – “When science writer David Dobbs is suddenly unable to remember how to drive his kids to school, he sets off on a quest to understand his own brain, and makes a shocking discovery.”

Earth took ten million years to recover from Permian-Triassic extinction by Duncan Geere

Of Darwin, Earthworms, and Backyard Science by Anthony Martin

The great Pacific garbage reality by Usha Lee McFarling – “The great Pacific garbage reality. It’s not tsunami debris we should fear; it’s the trash clogging our oceans.”

The snakes that eat caviar by Andrew Durso

On the humanity (or lack thereof) of the X-Men by Megan M. McCullen

Tuatara reptile slices food with ‘steak-knife teeth’ by Victoria Gill

Traumatized animal radically changes diet and behavior in an unhealthy way: the real story of the “vegetarian shark” by David Shiffman

Reaching Out: Why are scientists trapped in the ivory tower and what can be done to escape? by Jeanne Garbarino

Keep shouting. You never know who is listening. by Emily Finke


Media, Publishing and Technology:

We need to reinvent the article by Sean Blanda

Blogonomics, ten years on by Henry Copeland

The 10 Biggest Social Media Lies by Mike Elgan

The Floppy Disk means Save, and 14 other old people Icons that don’t make sense anymore by Scott Hanselman

Wikipedia as an explainer by Dave Winer

Libre redistribution – a key facet of Open Access by Ross Mounce

Amid Tweets and Slide Shows, the Longform Still Thrives: How the form survives in this digital era by Emma Bazilian

Making More Scientists by John Wilbanks

What is it that journalists do? It can’t be reduced to just one thing by Jonathan Stray

Why “We the People” should support open access by Bill Hooker

The Scienceblogging Weekly (May 25th, 2012)

Blog of the Week:

Over the years, Better Posters blog has become the “Go To” place to send students when they start preparing posters for their first scientific meetings. Updated weekly, on Thursdays, this blog by Dr. Zen Faulkes (who also blogs at his other two awesome blogs NeuroDojo and Marmorkrebs, as well as on the #SciFund blog) provides ideas, suggestions, underlying theory, and thorough, fair critiques of poster design for scientific conferences. It is a link I (and I am sure many others) send whenever asked what is the best resource for preparing a good poster. Zen Faulkes also has a broader category of posts about presentations in general, both oral and poster, under the Zen of Presentations tag on his other blog.

Top 10:

Phineas Gage’s connectome by Mo Costandi:

Anyone who has studied psychology or neuroscience will be familiar with the incredible case of Phineas Gage, the railroad worker who had a metre-long iron rod propelled straight through his head at high speed in an explosion. Gage famously survived this horrific accident, but underwent dramatic personality changes afterwards. In recent years researchers reconstructed his skull and the passage of the rod through it, to try to understand how these changes were related to his brain damage. Now, neuroscientists from the University of California, Los Angeles have produced Gage’s connectome – a detailed wiring diagram of his brain, showing how its long-range connections were altered by the injury.

Replication studies: Bad copy by Ed Yong:

Positive results in psychology can behave like rumours: easy to release but hard to dispel. They dominate most journals, which strive to present new, exciting research. Meanwhile, attempts to replicate those studies, especially when the findings are negative, go unpublished, languishing in personal file drawers or circulating in conversations around the water cooler. “There are some experiments that everyone knows don’t replicate, but this knowledge doesn’t get into the literature,” says Wagenmakers. The publication barrier can be chilling, he adds. “I’ve seen students spending their entire PhD period trying to replicate a phenomenon, failing, and quitting academia because they had nothing to show for their time.” These problems occur throughout the sciences, but psychology has a number of deeply entrenched cultural norms that exacerbate them. It has become common practice, for example, to tweak experimental designs in ways that practically guarantee positive results. And once positive results are published, few researchers replicate the experiment exactly, instead carrying out ‘conceptual replications’ that test similar hypotheses using different methods. This practice, say critics, builds a house of cards on potentially shaky foundations…

Plan X; or, Planning White’s Small Step by Amy Shira Teitel:

In 1964, the launch schedule for the Gemini program was set and it was tight. Missions with new objectives would launch every eight to ten weeks taking NASA a step closer to the Moon each time. But hardware setbacks and some surprising feats by Soviet cosmonauts took a toll on the schedule. In the first half of 1965, NASA developed a plan that would see Gemini match and begin to overtake the Soviet Union in space. It was done largely in secret and known internally as Plan X….

Against the Infantilization of the Natural History Museum by Justin Erik Halldór Smith (and related: Relics With Much to Tell About Bird Diets May Be Lost to Time by Sarah Fecht):

…The project of exhaustively collecting and describing the basic kinds of large animal, and analyzing and displaying these animals’ bodily parts and systems, is a project that gained momentum in the late Renaissance and that was largely completed by the end of the 19th century. Like, say, realist painting in the Western tradition, it is a project that has a bounded history (indeed the two histories fairly closely overlap one another). This means that an alpaca intestine displayed in formaldehyde is a sample of a part of a South American camelid; but it is also an artefact of a modern European knowledge project. In this respect a proper natural history museum, that is to say an unreconstructed adult natural history museum, is really two museums at once: it is a museum of nature, but also a museum of the history of a very singular attempt to know nature quite literally inside-out….

What a Physics Student Can Teach Us About How Visitors Walk Through a Museum by Henry Adams:

….To devise a good layout requires some understanding of what museum visitors do, and there’s surprisingly little literature on this topic. Most of the studies of museum-goers that I’ve seen rely on questionnaires. They ask people what they did, what they learned, and what they liked and didn’t like. No doubt there are virtues to this technique, but it assumes that people are aware of what they’re doing. It doesn’t take into account how much looking depends on parts of the brain that are largely instinctive and intuitive and often not easily accessible to our rational consciousness. Was there another mode of investigation and description that would illuminate what was actually taking place?…

Lies You’ve Been Told About the Pacific Garbage Patch by Annalee Newitz:

You’ve probably heard of the “Pacific garbage patch,” also called the “trash vortex.” It’s a region of the North Pacific ocean where the northern jet stream and the southern trade winds, moving opposite directions, create a vast, gently circling region of water called the North Pacific Gyre — and at its center, there are tons of plastic garbage. You may even have seen this picture of the garbage patch, above — right? Wrong….

The (misunderstood) language of DNA by Genegeek:

I love analogies and use them often to get people to think about scientific concepts in new ways. I’ll share some of my favourite ones on the blog but today, I want to talk about Analogies Gone Bad….There is a lovely analogy to help people understand DNA code: DNA can be seen as a language…

Killers that sux by DrRubidium:

You might notice the sting of the injection. Within seconds you’d realize you’re having trouble moving your eyes and fingers, followed by your arms and legs. If you were standing, you’d collapse. In a heap on the floor, you’d realize nearly every muscle in your body was paralyzed. Being fully conscious, your sense of panic would be rising as rapidly as the paralysis was spreading. Swallowing and breathing has become more and more difficult. Slipping into unconsciousness, your last conscious thought may well be “I am going to die.”…

What Is the “Bible of Psychiatry” Supposed to Do? The Peculiar Challenges of an Uncertain Science by Vaughan Bell:

The American Psychiatric Association have just published the latest update of the draft DSM-5 psychiatric diagnosis manual, which is due to be completed in 2013. The changes have provoked much comment, criticism, and heated debate, and many have used the opportunity to attack psychiatric diagnosis and the perceived failure to find “biological tests” to replace descriptions of mental phenomena. But to understand the strengths and weaknesses of psychiatric diagnosis, it’s important to know where the challenges lie….

Do Plants Smell Other Plants? This One Does, Then Strangles What It Smells by Robert Krulwich:

“Plants smell,” says botanist David Chamovitz. Yes, they give off odors, but that’s not what Chamovitz means. He means plants can smell other plants. “Plants know when their fruit is ripe, when their [plant] neighbor has been cut by a gardener’s shears, or when their neighbor is being eaten by a ravenous bug; they smell it,” he writes in his new book, What a Plant Knows. They don’t have noses or a nervous system, but they still have an olfactory sense, and they can differentiate. He says there’s a vine that can smell the difference between a tomato and a stalk of wheat. It will choose one over the other, based on…smell! In a moment I’ll show you how….

Special topic: pigeons

Why Aren’t Cities Littered With Dead Pigeons? by John Metcalfe:

Any fair-sized city in the United States is lousy with pigeons, hoovering up bread crumbs from public squares and head-bobbing so much they look like little Jay Zs groovin’ to some fresh beats. The favorite rumpus room of the pigeon, New York City, is thought to contain anywhere between 1 and 7 million of the flapping rats of the sky. So where are all the dead ones?

Big Bird: Are New York’s pigeons getting fatter? An investigation into animal obesity. by David Merritt Johns

Pigeon GPS Identified by Megan Scudellari: “A population of neurons in pigeon brains encodes direction, intensity, and polarity of the Earth’s magnetic field.”

Pigeons have tiny compasses in their heads by Greg Laden.

Speaking pigeon by Kelly Slivka: Keeping up with New York City’s feathered underdogs.

Science:

The Zebra Neuron by TheCellularScale – Von Economo Neurons discovered in more and more species, lose the “human specialness” role.

Is the Purpose of Sleep to Let Our Brains “Defragment,” Like a Hard Drive? by Neuroskeptic. Or is it “Disk Cleaner”, or “Reboot”?

Gaming and Exercise: Will Diablo III Derail Your Discipline? by Melanie Tannenbaum – from the horse’s mouth – this research was done in her lab.

It’s supposed to hurt to think about it! by Ethan Siegel: “One of the most fundamental questions about the Universe that anyone can ask is, “Why is there anything here at all?””

Legal highs making the drug war obsolete by Vaughan Bell:

The Drachma and the Euro as a Cybernetic Question by Michael Tobis:

Life Traces as Cover Art and The Ichnology of Peeps by Tony Martin.

Copulatory vocalizations of chacma baboons (Papio ursinus), gibbons (Hylobates hoolock), and humans. by NCBI ROFL. Sonograms, thus it is science!

Putting the ‘Fear’ in Climate Change by Paige Brown – “Do scientists and climate communicators really need the ‘scary’ headlines and alarming facts to get media coverage?”

Energy Drinks: What’s the Big Deal? by Dirk Hanson: “The sons of Red Bull are sporting record concentrations of caffeine.”

Failure – what doesn’t get published in Psychology (for good reason?) by Åse Kvist Innes-Ker.

Uncertainty overdone by Bryan Walker: “As a concerned human being I don’t want scientists to soft-pedal on that evidence.”

A Sensitive Subject, on quantifying uncertainties in modeling climate change and its impacts, by Tamsin Edwards:

Could Angry Birds lead to mass murder? by Martin Robbins: “Attempts to link last year’s Norway shootings to Call of Duty are spectacularly misguided. Moral panic about violent video games is based on prejudice, ignorance and the selective use of flawed research.”

Chemistry at the hairdresser by JessTheChemist.

Our Favorite Toxic Chemicals and Toxic Carnival: Day One and Toxic Carnival: Day Two and Pain, Undoubtedly, Comes with the Cure by Matthew Hartings.

Neurons are like equations by TheCellularScale .

Persuasion and the Brain by David R. Gruber:

New sense organ helps giant whales to coordinate the world’s biggest mouthfuls by Ed Yong

In The Beginning Was the Mudskipper? by Carl Zimmer

Virtual resurrection shows that early four-legged animal couldn’t walk very well by Ed Yong

The Positively Biased Life by Matthew Chew on non-publication of negative data, and on ecology as a discipline.

Will you explain the differences (and similarities) between endemic and epidemic diseases? by Emily Willingham. Eeeek – imagine a pandemic of iguanas!

It is a mistake to eliminate government science. Part I and Part II by Simon Goring

Carpenter versus Aurora 7 by Amy Shira Teitel

You scientist, we want you to get ahead….but not too FAR ahead! by Anne Buchanan

Birding from parking level five: Suburban ospreys in Florida by Justine E. Hausheer

The smokeless stove: A partnership between academics and designers in New York City has produced a stove that could reduce child deaths in Africa by Emma Bryce

Media, Publishing and Technology:

Your 5-minute, 5-day orientation to Twitter by Anton Zuiker

Web Design Manifesto 2012 by Jeffrey Zeldman

The teacher I hated who changed my life by General Tso:

How to Deal with Information Overload by Walter Jessen and Simon Franz.

Can Blogs Be Used to Resolve Conflicts? by Greg Laden:

Data journalism research at Columbia aims to close data science skills gap by Emily Bell and Alex Howard

The Facebook Fallacy by Michael Wolff: “For all its valuation, the social network is just another ad-supported site. Without an earth-changing idea, it will collapse and take down the Web.”

How Amy O’Leary live-tweeted her own speech — and won the #backchannel by Andrew Phelps

The verdict: is blogging or tweeting about research papers worth it? and When was the last time you asked how your published research was doing? by Melissa Terras

Who gives a tweet? After 24 hours and 860 downloads, we think quite a few actually do by Kaisa Puustinen and Rosalind Edwards

Why newspapers need to lose the ‘view from nowhere’ by Mathew Ingram

Buzz Bissinger: Newspaper editors are “very cautious — too cautious” by Adrienne LaFrance

How obsession can fuel science blogging: The story of Retraction Watch by Ivan Oransky

Text mining: what do publishers have against this hi-tech research tool? by Alok Jha

Copy editing: It’s taught me a lot, but it has to change by Steve Buttry

The Scienceblogging Weekly (May 18, 2012)

Blog of the Week:

For the greatest portion of the history of biology, every organism was a “model organism”. One would pick a problem and then choose which organism would be most suited for answering those particular questions. Then, in the 1990s, everyone jumped onto the bandwagon of studying just a handful of organisms that could be genetically modified at the time: mouse, fruitfly, thale cress, zebrafish, African clawed frog, bread mold, brewer’s yeast, or E.coli. All the other organisms were all but abandoned, only studied by a small number of die-hard researchers and, increasingly, amateurs. Now that technology allows us to investigate (and to some extent manipulate) entire genomes of almost any species we’d like, researchers are going back and rediscovering the abandoned model organisms once again. One of these is Anolis, a large group of species of lizards, noted for their dewlaps, and known especially for their fast adaptive radiation on tropical islands.

And now there is a blog that covers everything about these lizards – Anole Annals. Posts are written both by veteran researchers and their students, from several laboratories, as well as other contributors. They cover both recent and historical papers on evolution, ecology, biogeography, behavior, physiology, biomechanics and genetics of this diverse group of reptiles. They also describe their own research, including anecdotes and adventures from field work, equipment they use in the lab, and successes in discovery. On top of that, they help people ID the species from pictures, pay attention to the appearance of anoles in art and in the popular culture and generally have a lot of fun doing all of this. A blog entirely devoted to just one group of animals sounds very ‘niche’, but what they did was build a blog that has something for everyone and is a great fun (as well as insightful and educational) read for everyone.

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Top 10:

The secret molecular life of soap bubbles (1913) by Greg Gbur:

…Today we take for granted that all material objects in the universe are comprised of discrete “bits” of matter, which we call atoms; however, even up until the early 20th century there were still proponents of the continuum hypothesis, in which all matter is assumed to be infinitely divisible…

Motherhood, war, and attachment: what does it all mean? by Emily Willingham:

I’m sure many mothers can attest to the following: You have friends who also are mothers. I bet that for most of us, those friends represent a spectrum of attitudes about parenting, education, religion, Fifty Shades of Grey, recycling, diet, discipline, Oprah, and more. They also probably don’t all dress just like you, talk just like you, have the same level of education as you, same employment, same ambitions, same hair, or same toothpaste. And I bet that for many of us, in our interactions with our friends, we have found ourselves judging everything from why she insists on wearing those shoes to why she lets little Timmy eat Pop Tarts. Yet, despite all of this mental observation and, yes, judging, we still manage to get along, go out to dinner together, meet at one another’s homes, and gab our heads off during play dates. That’s not a war. That’s life….

As oxygen filled the world, life’s universal clock began to tick by Ed Yong:

The Earth’s earliest days were largely free of oxygen. Then, around 2.5 billion years ago, primitive bacteria started to flood the atmosphere with this vital gas. They produced it in the process of harnessing the sun’s energy to make their own nutrients, just as plants do today. The building oxygen levels reddened the planet, as black iron minerals oxidised into rusty hues. They also killed off most of the world’s microbes, which were unable to cope with this new destructive gas. And in the survivors of this planetary upheaval, life’s first clock began to tick and tock….

Poisoning the Dalai Lama. Or Not by Deborah Blum:

Earlier this week, the Tibetan Buddhist leader, the Dalai Lama, told British journalists that he’d been warned of an ingenious Chinese plot to assassinate him with poison. Very ingenious, according to the plot he laid out for the Sunday Telegraph. He’d learned, he said, of a plan to send out a squad of women, pretending to be followers, who would have poison spread through either their hair or headscarves. When he laid his hands on their heads for a blessing, a lethal dose could be absorbed through his skin…

The Brain Hidden Epidemic: Tapeworms Living Inside People’s Brains by Carl Zimmer:

….But sometimes tapeworms take a wrong turn. Instead of going into a pig, the eggs end up in a human. This can occur if someone shedding tapeworm eggs contaminates food that other people then eat. When the egg hatches, the confused larva does not develop into an adult in the human’s intestines. Instead, it acts as it would inside a pig. It burrows into the person’s bloodstream and gets swept through the body. Often those parasites end up in the brain, where they form cysts….

Why Octopuses Should Run Our National Security Infrastructure by Annalee Newitz:

Next time the government wants new ideas about how to protect our nation’s security, it should consult an octopus. That’s the unusual proposition of marine biologist Rafe Sagarin, a pioneer in the infant field of “natural security,” where experts use models from nature to help them come up with emergency responses to everything from terrorist attacks to pandemics. Sagarin has just published a book about his work called Learning from the Octopus: How Secrets from Nature Can Help Us Fight Terrorist Attacks, Natural Disasters, and Disease. Any scientific theory that involves the superiority of cephalopods is automatically intriguing, so I called up Sagarin to talk about it.

Solving the Mystery of the Placental Jellyfish by Craig McClain:

Yesterday the DSN crew first saw the video above. What is this large floating sheet of goo? Is it alive? Was it once alive? The two leading contenders seems to be that it is A) an old whale placenta or B) a rare and enigmatic deep-sea jellyfish. And the answer is…. B)

Physics’s PR problem: Moving beyond string theory and multiple universes by Ashutosh Jogalekar:

….The problem is that most of the popular physics that the public enjoys constitutes perhaps 10% of the research that physicists worldwide are engaged in. Again, count the number of physics books in your local bookstore, and you will notice that about 90% of them cover quantum mechanics, cosmology, particle physics and “theories of everything”. You would be hard-pressed to find volumes on condensed matter physics, biophysics, the physics of “soft” matter like liquids and non-linear dynamics. And yes, these are bonafide fields of physics that have engaged physics’s best minds for decades and which are as exciting as any other field of science. Yet if you ask physics-friendly laymen what cutting-edge physics is about, the answers will typically span the Big Bang, Higgs boson, black holes, dark matter, string theory and even time-travel. There will be scant mention if any of say spectroscopy, optics, polymers, magnetic resonance, lasers or even superconductivity….

Dear Media, Leave My Dinosaurs Alone by Brian Switek:

I wish I could take dinosaurs away from the media for a while. Someone certainly should. Lazy journalists and unscrupulous documentary creators have amply demonstrated that they just can’t play nice with Tyrannosaurus, Triceratops and kin…

Do Bonobos And Chimpanzees Offer A Path To Understanding Human Behavior? by Sheril Kirshenbaum:

What leads people to acts of violence and genocide? What triggers empathy and altruism? Duke evolutionary biologist Brian Hare and research scientist Vanessa Woods believe the answer may be found in the great ape known as the bonobo….

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Special topic: snakes:

And the Cascabel will Fall Quiet… by John F Taylor. Rattlesnakes may actually be learning and they may become more dangerous if their roundups aren’t stopped.

Spore Dispersal by Snakes by Jessica M. Budke

The Secret to Success Is Giant-Jawed Snake Babies by Elizabeth Preston

Identifying snake sheds, part II by Andrew Durso

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Science:

Pacific plastic, sea skaters, and the media: behind the scenes of my recent paper by Miriam Goldstein. Once you are featured in The Onion, your career has reached the peak. What more can one do after that?

In the wake of high-profile controversies, psychologists are facing up to problems with replication. by Ed Yong. Psychology example, applicable at least to some extent to other fields.

The Flavor of Neutrinos by Matthew Francis

Confusing messages about sugar are stupid by David Despain

Two Earths would be needed to sustain human activity by 2030, report finds by Meghan Neal

Science vs. PR by Robert McHenry. How a scientific paper about chemistry turned into mass media articles about alien dinosaurs.

Who hates cilantro? Study aims to find out by Cari Nierenberg

Microbiology at Sea: A tale of ballast, vomit, and cockroaches by Holly Bik

Is the U.S. Ready for Home HIV Tests? by Benjamin Plackett

Lessons from the Lab: How to Make Group Projects Successful by Annie Murphy Paul. “Megacollaboration is becoming the norm in science. Here’s what we can learn about what works when working together.”

Sometimes scientists have a duty to swap the pipette for the placard by Adam Smith

Academics on archosaurs: Jerry Harris by Dave Hone

Whistle Recognition in Bottlenose Dolphins by Tara Thean

The regulation of nonsense by Jann Bellamy on medical quackery and CAM.

What Happens to All That Volcanic Ash? by Erik Klemetti

Cannibalism? by Mark Crislip

Science Standards: The Next Generation by Rhett Allain

Is the holocaust denial/climate change denial comparison apt? by Mark Hoofnagle

The Coming Beepocalypse, It’s hard out there for a bee, and Bees and STDs by Bug Girl

Huge Turtle Was Titanoboa’s Neighbor by Brian Switek

De-caffeinating pills? Say it ain’t so, Think Geek by David Kroll

Human morality is evolving by Ken Perrott

5 Things the Science Doesn’t Say About the Conservative Brain by Chris Mooney

The Republican Brain by Chris Mooney by Chad Orzel

Turning Wolves into Hounds by Heather Pringle

Dendrites of Direction by TheCellularScale

LA smog: more cows than cars? by Scott K. Johnson

The New Atheism and Evolutionary Religious Studies: Clarifying Their Relationship by David Sloan Wilson

Opinion: Academia Suppresses Creativity by Fred Southwick

Methods for Studying Coincidences by Samuel Arbesman

Is misconduct more likely in drug trials than in other biomedical research? by Ivan Oransky

A rising tide of willful ignorance by Rob Schofield. Lobbyists pushing to dictate which data scientists are allowed to use.

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Media, Publishing and Technology:

All A’Twitter: How Social Media Aids in Science Outreach a Master’s Thesis by Caitlyn Zimmerman about the pros & cons and strategies in using social media in Marine Conservation outreach.

Guest Editorial: It’s Time To e-Volve: Taking Responsibility for Science Communication in a Digital Age by Christie Wilcox

Young scientists ask: Is there room out there for one more science communicator? by Denise Graveline

The SA Incubator: Helping Hatch Science Writers Since July 2011 by Erin Podolak

Research Blogs and the Discussion of Scholarly Information by Hadas Shema, Judit Bar-Ilan and Mike Thelwall, a research paper about science blogs using the ResearchBlogging.org aggregator. Responses by Scicurious, Neurocritic, Jonathan Eisen, Caroline Tucker, Misha Angrist and Invader Xan.

Beyond a Trend: How Scientists Use Social Media by Jessica Rohde

Twitter is like… by dorkymum. A beautiful metaphor to try on n00bs.

Do I Write? Or Do I Tweet? by Geoff Brumfiel

Mom, this is how twitter works by Jessica Hische

Printed books existed nearly 600 years before Gutenberg’s Bible by Annalee Newitz

Digital Pagination by Nate Barham. The page-flip is just another in a long line of “unnecessary” features to help us poor humans understand the content.

My personal take: 3 reasons I don’t like newspaper paywalls by Mathew Ingram and a response to it, Paywalls are backward-looking by Dave Winer.

Commenting, Moderation, and Provocation by Marc Bousquet

Aggregation guidelines: Link, attribute, add value by Steve Buttry – a definitive guide.

Please Don’t Learn to Code by Jeff Atwood, and Should you learn to code? by Dave Winer, and Don’t tell me not to learn! by Eva Amsen.

The newsonomics of News U.: Journalism and education are both about knowledge. Could their post-disruption business models start to blur? by Ken Doctor.

See, this is why publishers irritate me so much and Publishers versus everyone by Mike Taylor

The government spends billions on research. Should we have to pay $20,000 more to see the results? by Suzy Khimm

The Tao of Shutterstock: What Makes a Stock Photo a Stock Photo? by Megan Garber

How Facebook Saved Us from Suburbia by Christopher Mims and Does Facebook Turn People Into Narcissists? by Tara Parker-Pope

The tip of the iceberg- what digital photography really costs by Brendan Moyle

A Brief History and Proposed Definition for ‘Attention Economics’ by Adrian J. Ebsary

The Scienceblogging Weekly (May 11, 2012)

In the flood of information, filters are invaluable – people you trust to pick the best so you can focus on that, only that, and ignore the less important stuff.

Editors (including Jason here at the network) at ScienceSeeker.org and editors (including Krystal here at the network) at ResearchBlogging.org filter the best science blog posts each week.

Ed Yong’s weekly linkfests (like this one) and monthly Top 10 choices he’d pay for (see this for an example) are must-bookmark resources.

Some other bloggers are occasional or regular sources of links I pay attention to, e.g., John Dupuis on academia, publishing, libraries and books, Chad Orzel on academia and science – especially physics, Mike the Mad Biologist on science and politics, and the crew at the Knight Science Journalism Tracker for the media coverage of science. And at the NASW site, Tabitha Powledge has a must-read On science blogs this week summary every Friday.

Most of the articles and blog posts I read every day are brought to my attention by my friends on Twitter, Google Plus and Facebook, I get some through email notifications, as well as gleaned from ScienceBlogging.org and ScienceSeeker.org science blog aggregators. I then share a LOT of those links to my followers on Twitter, Facebook and Google Plus every day.

Every workday around midnight I post a linkfest on The Network Central to make it easier to see our network posts if you missed them during the day. Khalil and I take turns highlighting the best work by up-and-coming science writers on The SA Incubator blog. Weekly posting of the ever-growing list of posts submitted for the Open Laboratory is another resource. SciAm homepage is also set as a collection of filters – we decide what goes into “Blogs” box, what in the “Latest News” feed, what in the “Science Agenda” on top of the page, and what to collect into “In-Depth Reports” over time.

Now I will also start a weekly collection of links that are “best of the best” of everything I read over a period of a week – not the posts from #SciAmBlogs, but the rest of the Web: other blogs and other media sites. That means a lot of cutting! I mean, I tweet TONS of links every day! Choosing the best will not come easy to me, so this is a good exercise for me as well, and I hope will become a useful resource to you.

I’ll try to do this every Friday, time of day dependent on travel, work, life etc. Let me know in the comments if you have suggestions for formatting, timing, etc.

Blog of the Week:

Academic Panhandling: The art of granting for your supper. Everything you ever needed to know about writing grant proposals, written by a professional grant writer.

Top 10:

The Moscow Rules – Science Edition: Part 1, Part 2, Part 3, Part 4, Part 5, Part 6, Part 7, Part 8, Part 9 and Part 10 by Zen Faulkes, guest-blogging at Scientopia:

The Moscow Rules were directives that undercover American intelligence agents allegedly used in the Cold War. The rules were there to increase agent’s chances of making it out safely.

Sometimes, being in academic science can feel like being enemy territory in a cold war. You are often in strange territory (new lab), with many unfamiliar people (other grad students, post-docs, faculty) whose motivations are unclear. You might not trust them completely (especially administrators). There might not be the risk of attempted assassination by having poison injected into you with a specially built umbrella, but there’s enough similarity that the Moscow Rules can still apply…

If You Want A Lizard To Run Fast, Yell At It by Jonathan Losos:

…“As you well know, some days things just don’t seem to go well when testing whole animal performance. On one of those days out of frustration, fatigue, etc., we simply yelled at an apparent “slacker” lizard in jest. Much to our surprise this seemed to make a difference. We were also aware of the two recent papers for other species of lizards in which sound appeared relevant to behaviors associated with detecting threats. So, we figured what the heck, why not test for such effects systematically. Unlike many of the studies that you and others have performed with anoles, unless we simply can’t get a lizards to run along the racetrack or they appear unhealthy, we include data from all of the individuals rather than subjectively rating the trials for their quantity. Perhaps, some of the gains in speed associated with our yelling were greatest for those individuals that otherwise might have been discarded after receiving a poor subjective quality rating. Of course, we lack a simple way of determining this. Similarly, we have not yet methodically tested for whether expletives are more effective that milder language.”…

Invisible aliens: they’re not life as we know it — yet by John Rennie:

Both publications posit that life, at its most abstract, involves a thermodynamic disequilibrium. That is, life involves physical structures that can only maintain their integrity with inputs of energy. These physical structures will require covalent bonds between atoms (to allow nontrivial chemical reactions), so the environment in which life appears must allow such chemistry to occur. Some kind of liquid, but not necessarily water, would therefore also be necessary to enable those reactions. Finally, some molecules in the living system would need to be capable of Darwinian evolution for the life to arise. (Take note, creationist doubters of evolution: it is now a useful part of the definition of life!)

From theory and experiments, both papers argue that life with these traits could evolve under a wide (but definitely limited) range of environments. Carbon-based life on worlds with liquid water might represent a particularly versatile and common set of solutions, but biochemistry could go in many directions even on Earthlike worlds. And on planets and moons where terrestrial life would perish instantly, life based on silicon instead of carbon or liquid hydrocarbons instead of water might thrive…

Plastic Lessons by Shara Yurkiewicz:

I always feel awkward when I talk to plastic patients. The simulation mannequins are impressive: their eyes blink, their chests expand as they breathe, they have pulses, they bleed, they burn. A screen monitors vital signs: I administer a pressor and a dipping blood pressure perks up, or I order a beta blocker and a racing heart rate slows. A physician in the next room lends her voice to play the patient, responding to what I do and say. A physician in the same room becomes a tech, relying results of my tests and nudging me through the next steps when I veer off course….

Twilight of the giants in taxonomy by Emmett Duffy:

In an important sense, nothing exists until it’s given a name. And in the living world of organisms, names—official, scientific names—are assigned by unique creatures called taxonomists, experts in the minutiae of structure and biology of particular groups of organisms, working according to a strict and arcane body of rules of biological nomenclature. These individuals tend to be specialists—sages of whales, anglerfishes, microscopic worms that live only between the grains of sand on beaches, microscopic algae, purple sulfur bacteria, and everything in between…

Is Technology Destroying Your Relationships? by A.V.Flox:

Social networks put a number on those weak ties, but we all have weak ties in our meatspace lives. Marche bemoans how we use machines to check out at the grocery store instead of waiting in line with other people to have our purchases rung up by an actual human. But I wonder — even if you were to speak to the woman giving you dirty looks because you were buying a product with a big carbon footprint, can you actually call that a meaningful relationship?

I talk to people all the time — cab drivers, waiters, flight attendants, the guy at the post office, my manicurist, my barista, the boys at the convenience store where I buy my cigarettes, the guy at the newsstand. I am there, in the flesh. Does this mean our connections are any more meaningful than a like or a plus on social media?

Weak ties exist. They’re everywhere. All we have to do to make them meaningful is take the chance to go deeper. This is as true online as it is offline.

What does it mean to say that something causes 16% of cancers? by Ed Yong:

…executives and policy-makers love PAFs, and they especially love comparing them across different risk factors. They are nice, solid numbers that make for strong bullet points and eye-grabbing Powerpoint slides. They have a nasty habit of becoming influential well beyond their actual scientific value. I have seen them used as the arbitrators of decisions, lined up on a single graphic that supposedly illustrates the magnitude of different problems. But of course, they do no such thing…

The Mysterious Case of the Vanishing Genius by Mike Martin:

Margie Profet was always a study in sharp contradictions. A maverick thinker remembered for her innocent demeanor, she was a woman who paired running shorts with heavy sweaters year-round, and had a professional pedigree as eccentric as her clothing choices: Profet had multiple academic degrees but no true perch in academe. In the late 1980s and early 1990s, Profet published original theories about female reproduction that pushed the boundaries of evolutionary biology, forcing an entire field to take note. Indeed, back then it was hard not to notice Margie Profet, a vibrant young woman who made a “forever impression” on grade school chums and Harvard Ph.D.s alike. Today, the most salient fact about Profet is her absence. Neither friends, former advisers, publishers, nor ex-lovers has any idea what happened to her or where she is today. Sometime between 2002 and 2005, Profet, who was then in her mid-40s, vanished without a trace…

Fear fans flames for chemical makers by Patricia Callahan and Sam Roe (see also Part 2 Big Tobacco wins fire marshals as allies in flame retardant push and Part 3 Distorting science):

Manufacturers of fire retardants rely on questionable testimony, front groups to push standards that boost demand for their toxic — and ineffective — products

Asymmetrical snakes by Andrew Durso:

Animals have a long tradition of being bilaterally symmetrical – that is, of the left side and the right being nearly identical. Sure, there are a few exceptions – the human heart is nearly always farther to the left side, for instance. Snakes and other elongate, limbless animals sometimes stagger their paired organs (gonads, kidneys) so that one is in front of the other, to better fit in their cylindrical bodies. Most snakes have even done away with one of their two lungs. But the basic external body plan, the bones and muscles on the left and the right, are always mirror-images of one another, right?

Enter the pareatid snakes…

Science:

Drop the base to make bagels more delectable by Raychelle Burks:

Sometimes, just hearing that certain chemicals are in food just puts people off. “I think that a lot of people would be really surprised about the precise chemicals that are used to make their favorite foods,” said Dr. Hartings. Take Cool Whip for example. One of its ingredients is polysorbate-60, a chemical that helps give Cool Whip its puffy appearance. Polysorbate-60 moonlights as an ingredient in sexual lubricants like K-Y YOURS+MINE. Our foods contain all kinds of chemicals that have more than one job. Thankfully, one of those jobs is making food delicious.

Insects that skate on the ocean benefit from plastic junk by Ed Yong:

Imagine a world of two dimensions, a world with no up or down… just across. No climbing, falling, jumping, or ducking… just shimmying and sidling. Welcome to the world of the sea skater.

Sea skaters, or ocean striders, are small bugs. They’re relatives of the pond skaters or water striders that zip spread-eagled across the surface of ponds and lakes. Except they skate over the open ocean, eating plankton at the surface…

Problems in the neurozone by Pete Etchells:

Having a scan of your brain is a uniquely odd experience. I had one done once. I was loaded, torpedo-like, into a claustrophobia-inducing, cocoon-like chamber for nearly an hour, the first few terrifying minutes of which I spent desperately trying to recall whether I had actually passed that metal ball-bearing I swallowed when I was a kid. The machines themselves are pretty damn loud, but something about repetitive clunking noises seems to lull me into a state of relaxation, so I spent the majority of my time in the launch chamber trying not to snooze. Honestly, it was all quite enjoyable…

Abandoment issues by Dr. Al Dove, guest-blogging at NeuroDojo:

There exists on my hard drive a folder into which I loathe copying files, but only slightly less than I would loathe deleting them all together. It is a folder called “Aborted Manuscripts” and it is this folder which is the source of my shame. It is a graveyard of stupid ideas and of great ones poorly executed, of unfinished cogitations, of journal rejections, of unresponsive colleagues and of frustrating students. It’s a roadmap documenting 15 years of science (read: “me”) not doing what science (read: “me”) is supposed to do – get published…

Put Away The Bell Curve: Most Of Us Aren’t ‘Average’ by Shankar Vedantam:

The bell curve powerfully shapes how we think of human performance: If lots of students or employees happen to show up as extreme outliers — they’re either very good or very bad — we assume they must represent a skewed sample, because only a few people in a truly random sample are supposed to be outliers.

New research suggests, however, that rather than describe how humans perform, the bell curve may actually be constraining how people perform. Minus such constraints, a new paper argues, lots of people are actually outliers.

Human performance, by this account, does not often fit the bell curve or what scientists call a normal distribution. Rather, it is more likely to fit what scientists call a power distribution…

The real CSI: what happens at a crime scene? by Craig Taylor:

From the diver who finds the body parts, to the forensic specialist who identifies flecks of paint on the victim and the handwriting expert who examines the killer’s notes… What happens behind the yellow tape of one crime scene

Of mice and Marmaduke (and dinosaur farts) by Mike Argento:

EDITOR’S NOTE: The following column contains sophomoric humor and references to the bodily functions of dinosaurs and the size of certain anatomical features of mice, all in the name of science. If this kind of thing offends you, please skip this and go right to Marmaduke. That dog, he cracks us up…

Spacesuit In A Cave by Sarah Everts:

Most visitors to the million-year-old Dachstein Giant Ice Cave prefer to wear standard winter coats during visits to its freezing, icy interior. But for five days the Dachstein cave systems were a temporary lab for a squad of space scientists. Some 50 scientists assembled from three continents to use the UNESCO World Heritage site as a proxy for Mars—a first for the cave system, which normally hosts jazz concerts, modern art exhibits, laser shows, and a steady stream of tourists….

Experimental Biology Blogging: Self-promotion and ‘self-promotion’ by Scicurious:

But of course, this is because academics have two different kinds of self-promotion. One is ok, and one is not. One takes place in the ivory tower, and one involves the dreaded public…

1859’s “Great Auroral Storm”—the week the Sun touched the earth by Matthew Lasar:

Noon approached on September 1, 1859, and British astronomer Richard Christopher Carrington was busy with his favorite pastime: tracking sunspots, those huge regions of the star darkened by shifts in its magnetic field. He projected the Sun’s image from his viewing device onto a plate of glass stained a “pale straw colour,” which gave him a picture of the fiery globe one inch shy of a foot in diameter…

The Physics of Spilled Coffee by Jon Cartwright:

…Krechetnikov and his graduate student Hans Mayer decided to investigate coffee spilling at a fluid dynamics conference last year when they watched overburdened participants trying to carry their drinks to and fro. They quickly realized that the physics wasn’t simple. Aside from the mechanics of human walking, which depends on a person’s age, health, and gender, there is the highly involved science of liquid sloshing, which depends on a complex interplay of accelerations, torques, and forces. …

Why Do Conference Talks Suck, and How Can We Change That? by Matthew R. Francis:

…Yes, some speakers are better than others, and a few of the 42 talks I heard were very good. Also, I know I used to commit many of the same sins I witnessed in talks yesterday and the day before, so as I list the problems, I’ll flag my own bad habits (current and former). Based on conversations with my friends, this is not a problem limited to particle physics conferences, much less to physics conferences in general: it’s endemic in science, and perhaps most academic fields…

Sleek, Smart Spacesuits Are on the Horizon by Amy Shira Teitel:

Spacesuits are poised to go the way of the cell phone – once bulky and cumbersome, researchers are working on making them slim and smart. In the future, astronauts might be wearing specially engineered garments that combine the life-preserving features of a spacesuit with augmented reality technology that could intuit the wearer’s needs…

How and Why Neuroscience should be taught in School by TheCellularScale:

…Neuroscience is sort of where genetics was 20-30 years ago: The scientific frontier, fascinating to the public, changing the general worldview, raising ethical questions, science fiction’s closest reflection in reality. This has its benefits and its downfalls. There is currently strong general enthusiasm for neuroscience for just these reasons, but because everything ‘neuro’ is so exciting, the risk of media misrepresentation is high and the misuse of neuroscience concepts and terms by pseudo-science is common. …

Fetal Attraction by Robert Krulwich:

…Dr. Johnson says cells from fetal boys and girls have been found in mothers “four to five decades following the last pregnancy.” That fetus may have grown into a middle aged pharmacist, and still his cells are inside his mother. Cells wouldn’t persist in foreign body for NO reason. They must be doing something, but what?…

On Biocultural Anthropology by Daniel Lende:

…what brings many students into anthropology, and still impassions me about the field, is that it does approach the question of “What does it mean to be human?” in the broadest, most interdisciplinary way. And it strikes me that we have some core analytical approaches to that question that matter, and that this style of thinking is what really makes up the holism of anthropology, rather than a particular commitment to four-fields and working across the different sub-disciplines. This human lens includes a comparative approach, an attention to variation across time and space, a recognition that we as researchers inevitably bias our own data, and, yes, a commitment to drawing on multiple strands of research…

94 Elements by The 94 Elements team:

There are 94 naturally occurring elements, from Hydrogen to Plutonium, and together they make up everything in the world. The stories of the elements are the stories of our own lives, revealing the details of our personal lives, the patterns of our economies, and our relationships with our natural resources.

94 Elements is a new global filmmaking project, exploring our lives through the lens of the elements. The project is producing a collection of stories by different filmmakers about the endless ways the elements touch our daily lives. Each filmmaker takes one element as the basis for a film around how it’s used. The films are surprising and moving human stories – this is not about science, but about our human relationships with our mineral resources.

How Does the FDA Monitor Your Medical Implants? It Doesn’t, Really by Lena Groeger:

Each prescription drug you take has a unique code that the government can use to track problems. But artificial hips and pacemakers? They are implanted without identification, along with many other medical devices. In fact, the FDA doesn’t know how many devices are implanted into patients each year – it simply doesn’t track that data.

The past decade has seen numerous high profile cases of malfunctioning medical devices, which have led to injury or even death. Critics say the FDA’s minimal monitoring of devices contributes to these problems….

Leptin: Linking Malnutrition and Vulnerability to Infection by Michelle Ziegler:

As long as leptin levels stay within normal levels, all of the functions displayed above function normally. As the leptin levels drop, many of these functions are adversely effected. It is a wide-spread trigger for a starvation response. Why cripple the immune response during starvation? My best guess would be because of the huge energy expenditure required to keep the immune response running normally, especially in cellular proliferation.

Experts debate what makes a healthy vagina by Anna Salleh:

New US findings suggest our accepted definition of a healthy vagina could be ethnically biased, say some researchers, but others caution against over-interpreting the data.

A new study published today in Science Translational Medicine found, what an accompanying commentary describes as, an “unexpected and astonishing” variability over time in the vaginal bacterial communities of apparently healthy women….

The Ph.D. Now Comes With Food Stamps by Stacey Patton:

…A record number of people are depending on federally financed food assistance. Food-stamp use increased from an average monthly caseload of 17 million in 2000 to 44 million people in 2011, according to the U.S. Department of Agriculture’s Web site. Last year, one in six people—almost 50 million Americans, or 15 percent of the population—received food stamps.

Ms. Bruninga-Matteau is part of an often overlooked, and growing, subgroup of Ph.D. recipients, adjunct professors, and other Americans with advanced degrees who have had to apply for food stamps or some other form of government aid since late 2007….

Nicholas Kristof and the Bad, Bad Chemical World by Deborah Blum:

…Because his secondary crusade of the last few years, you know, the one against evil industrial chemicals, is really starting to annoy me. This is not saying that he’s entirely wrong – there are evil industrial chemicals out there. And, in many cases, they aren’t as well researched or as well regulated as they should be.

But if we, as journalists, are going to demand meticulous standards for the study and oversight of chemical compounds then we should try to be meticulous ourselves in making the case. And much as I would like it to be otherwise, I don’t see enough of that in Kristof’s chemical columns. They tend instead to be sloppy in their use of language, less than thorough, and chemophobic enough to undermine his legitimate points….

How Academic Biologists and Physicists View Science Outreach by Elaine Howard Ecklund, Sarah A. James and Anne E. Lincoln:

Scholars and pundits alike argue that U.S. scientists could do more to reach out to the general public. Yet, to date, there have been few systematic studies that examine how scientists understand the barriers that impede such outreach. Through analysis of 97 semi-structured interviews with academic biologists and physicists at top research universities in the United States, we classify the type and target audiences of scientists’ outreach activities. Finally, we explore the narratives academic scientists have about outreach and its reception in the academy, in particular what they perceive as impediments to these activities. We find that scientists’ outreach activities are stratified by gender and that university and disciplinary rewards as well as scientists’ perceptions of their own skills have an impact on science outreach. Research contributions and recommendations for university policy follow.

Blue-eyed-people-are-all-related zombie news by Jon Wilkins:

…So, to recap, 1) Cool paper. 2) Sex between blue-eyed people is not incest. 3) We have no idea when or where this mutation came from, but it is now conceivable that we could ask the question. 4) Embarrassingly bad science reporting spontaneously rises from the grave four years later and tries to eat your brain.

Conceptual Replication by Dave Nussbaum:

There is no substitute for direct replication – if you cannot reproduce the same result using the same methods then you cannot have a cumulative science. But conceptual replication also has a very important role to play in psychological science. What is conceptual replication? It’s when instead of replicating the exact same experiment in exactly the same way, we test the experiment’s underlying hypothesis using different methods…

Replicating Dissonance by Dave Nussbaum:

Another reason conceptual replication is so important is that if the field relies exclusively on direct replication then they risk replicating the same mistakes as well. Today I wanted to illustrate this risk by looking back at the history of one of social psychology’s most influential theories: cognitive dissonance. The richness and depth of Cognitive Dissonance Theory is a result of dozens of conceptual replications. I suggest that, had it not been for conceptual replication – had dissonance only been tested and re-tested in the original paradigm (Brehm’s Free Choice Paradigm) – the theory may not have stood up to recent criticisms directed at that particular paradigm…

Chimp acts like jerk, gets praised by scientists by Eoin O’Carroll:

A chimpanzee at Furuvik Zoo in Sweden has been lauded for his ‘innovation’ and ‘sophisticated cognitive skills,’ after behaving like a complete schmuck.

What is Peru’s dolphin and pelican die-off telling us? by Al Dove:

As many as 900 dolphins and over 4,000 pelicans have washed up dead on the beaches of northern Peru in the last couple of months, (see news coverage here, here and here), leading to a flurry of activity as various authorities and other interested parties move to find out what is going on. Experts cited in the news coverage suggest that unusually warm surface waters (10F higher than the season average) are changing the swimming patterns of the huge anchovetta schools off the coast of Peru, driving them deeper and out of the diving range of pelicans. In other words, the pelicans appear to be starving. The dolphins on the other hand, have shown a high prevalence of infection with morbilivirus, which is an infectious disease…

Why a Sperm Cell Is Like a Roomba by Elizabeth Preston:

A sperm cell, much like an expensive robotic vacuum cleaner, is a minimally intelligent body on a mission. Both the Roomba and the male gamete have to navigate a walled space without much idea where they’re going or why. And although it won’t clean your floors on the way, the sperm cell uses some of the same strategy as the robot vacuum…

In the Spring, Bat Moms Choose Girls by Elizabeth Preston:

Naturally a mother bat is happy to welcome into the world a bouncing baby whatever, as long as it has all its fingers and toe-claws. But she also wants her little one to have every advantage she can give it. So when spring comes early, big brown bats prefer to keep their female embryos. Unwanted males are reabsorbed into their mothers’ bodies as if they never existed…

Media, Publishing and Technology:

Science and Truth: We’re All in It Together by Jack Hitt:

…By now, readers understand that the definitive “copy” of any article is no longer the one on paper but the online copy, precisely because it’s the version that’s been read and mauled and annotated by readers. (If a book isn’t read until it’s written in — as I was always told — then maybe an article is not published until it’s been commented upon.) Writers know this already. The print edition of any article is little more than a trophy version, the equivalent of a diploma or certificate of merit — suitable for framing, not much else.

We call the fallout to any article the “comments,” but since they are often filled with solid arguments, smart corrections and new facts, the thing needs a nobler name. Maybe “gloss.” In the Middle Ages, students often wrote notes in the margins of well-regarded manuscripts. These glosses, along with other forms of marginalia, took on a life of their own, becoming their own form of knowledge, as important as, say, midrash is to Jewish scriptures. The best glosses were compiled into, of course, glossaries and later published — serving as some of the very first dictionaries in Europe.

Any article, journalistic or scientific, that sparks a debate typically winds up looking more like a good manuscript 700 years ago than a magazine piece only 10 years ago. The truth is that every decent article now aspires to become the wiki of its own headline. …

Neuroscience: Bloggers rule? by Paul Raeburn:

..We might be hard put to find any area of science coverage that hasn’t been subject to those kinds of distortions. Coverage of Lipitor and its ilk was certainly as likely to contain dramatic headlines, and particular agendas, including those of pharmaceutical companies. And ideological arguments? It depends upon what the meaning of “ideological” is…

Brain waves by Curtis Brainard:

From advice about “exercising your mind” to treatises on “the gay brain,” media coverage of neuroscience in the UK often pushes “thinly disguised ideological arguments” and reinforces artificial divisions between social groups, according to a new study….

What Will Become of the Paper Book? by Michael Agresta:

…In the past several years, we’ve all heard readers mourn the passing of the printed word. The elegy is familiar: I crave the smell of a well-worn book, the weight of it in my hands; all of my favorite books I discovered through loans from a friend, that minor but still-significant ritual of trust; I need to see it on my shelf after I’ve read it (and I don’t mind if others see it too); and what is a classic if not a book where I’m forced to rediscover my own embarrassing college-age marginalia?

Luddites can take comfort in the persistence of vinyl records, postcards, and photographic film. The paper book will likewise survive, but its place in the culture will change significantly. As it loses its traditional value as an efficient vessel for text, the paper book’s other qualities—from its role in literary history to its inimitable design possibilities to its potential for physical beauty—will take on more importance. The future is yet to be written, but a few possibilities for the fate of the paper book are already on display on bookshelves near you…

Abraham Lincoln Did Not Invent Facebook: How a Guy and His Blog Fooled the Whole Wide Internet by Megan Garber:

…He expected — and banked on — the web’s virality, he says; he didn’t anticipate, though, how eagerly that web’s self-defined news sources would pass along his “discovery.” And he assumed people would figure out the story’s hoaxiness much more quickly than they actually did — and, then, that the corrective powers of the social web would make that joke clear within the first hour or so after the story went live…

WWW inventor warns against call for comment sections to be placed under Data Rentention Act by Kristine Lowe:

…Berners-Lee said he was concerned about how increased demands for monitoring the web, both from governments looking for greater powers to track down terrorists and companies looking to trade our personal web data for commercial purposes, threatens the very infrastructure of the web.

He described his worry that people in the end will no longer trust and use the web for e.g. researching sensitive things like depression if they fear everything they do online is being monitored…

7 New Educational Startups Founded By Minorities in Tech by Wayne Sutton:

One of today’s most challenging yet promising markets is the educational system. If you want to see startups hungry to disrupt an industry, look no further. Founders are trying to solve the problems plaguing our education system: including reconciling student debt, providing students with the skills required to land a job both before and after graduation, and offering the best course material online regardless of age, location and educational level…

5 things med students can do to engage in social media and medicine by Josh Herigon:

One topic we neglected, however, was what current medical students can do right now to get their foot in the door and begin engaging in the social media and medicine conversation. I had hoped to get to this topic during my panel discussion, but there just weren’t enough hours to cover everything. Below is my attempt to remedy this omission. Here are a few simple things you can do:

Blinding us with science journals by Peter McKnight:

A competitive university culture that discourages the sharing of knowledge has led to the publication of many flawed and fraudulent studies…

The Arrogance of Publishers vs. Academic Culture – Why the Outcome Is Virtually Certain a scholarly kitchen metaphor by Mark Carrigan:

Imagine a situation where homes had no kitchens and utensils were unavailable. We would all be dependent on cafes and restaurants to eat and, it follows, our idea of what it is to prepare food would be exhausted by those working in such a capacity within these establishments. Now introduce kitchens into homes and affordable utensils into shops. Suddenly we can cook meals at home. Obviously the quality of the infrastructure is lower and there’s less expertise. For the sake of the thought-experiment, assume kitchens and utensils appeared suddenly, to an extent profoundly disruptive of established practices of going out for every meal. The meals cooked at home would be of poor quality, probably pragmatically orientated and often imitating (poorly) the meals available in restaurants and cafes.

The Science of Obituaries: Dead Pools, Obits in the Can and More by Arthur S. Brisbane:

Mr. McDonald said The Times currently has 1,500 advance obits in the can – “and we’re adding about 250 a year. Even if you subtract the number of those we’ll publish in a given year – say, 50 – the archive is growing significantly.”…

The Psychological Prerequisites of Punditry by Julian Sanchez (also see response by Andrew Sullivan):

….The nice way to say this is that selects for pundits who have a thick skin—or forces them to quickly develop one. The less nice way to say it is that it forces you to stop giving a shit what other people think. Maybe not universally——you’ll pick out a domain of people whose criticisms are allowed to slip through the armor—but by default….

Four perspectives on communicating your research, and then one more. #EB2012 by William Gunn:

…The most popular sentence of the whole session was “Don’t underestimate your audience’s intelligence, but do underestimate their vocabulary.” In other words, drop the jargon if you want the public to get what you’re saying. …

Filter-then-publish vs. publish-then-filter by Mike Taylor:

…In the face of such a flood of information, no-one can read everything that’s made it through the filters into all their favourite journals. So in practice what actually happens is that each of us filters again – finding relevant publications in a huge range of journals by the social web we’re in: mailing lists, blogs, Twitter, and so on. I believe some people even use FaceBook….

10 Commandments of Twitter for Academics by Katrina Gulliver:

…Twitter is what you make of it, and its flexibility is one of its greatest strengths. I’m going to explain why I have found it useful, professionally and personally, and lay out some guidelines for academics who don’t know where to start….

Fungible by Stijn Debrouwere:

A treatise on fungibility, or, a framework for understanding the mess the news industry is in and the opportunities that lie ahead.

Why Publishers Don’t Like Apps by Jason Pontin:

…But the real problem with apps was more profound. When people read news and features on electronic media, they expect stories to possess the linky-ness of the Web, but stories in apps didn’t really link. The apps were, in the jargon of information technology, “walled gardens,” and although sometimes beautiful, they were small, stifling gardens. For readers, none of that beauty overcame the weirdness and frustration of reading digital media closed off from other digital media. …

The brilliant Joe Weisenthal by Felix Salmon:

Appelbaum is absolutely right that Weisenthal stands apart by starting earlier, writing more, publishing faster. That’s who Joe is. But he’s absolutely wrong that there’s an “intensely competitive world of financial blogging, dominated by young men who work long hours and comment on every new development”. Go on — name a single other financial blogger who fits that description. I’m waiting. There’s the anonymous group blog ZeroHedge, perhaps. But the fact is that Henry Blodget, in hiring and promoting Joe, has succeeded in identifying and harnessing and leveraging a nervous energy which has been there all along. He didn’t start with some kind of inhuman job description and then hire Joe to fill it; he found Joe and then basked in the fruits of encouraging him to simply be his natural self.

River of News — FTW! by Dave Winer:

…I don’t think that fancy layout trumps newness. The name “news” tells you what’s important about news. Newness. So if you follow that clue, it leads you to the obvious conclusion that news should present first the newest bits we have. What’s next? The second newest bits. And third, fourth and so on. permalink
News is one of those things that is that simple. But it takes people a while to get there if they don’t allocate the time to take walks in the park and think about this stuff in an organized way….

Blogging and Kickstarter go together by Dave Winer:

…But once the users can communicate with each other, we will be able to pool our experience, and given enough time, smart users will learn the technology well enough to make the products that (key point here) they know there is demand for. Because they are the ones demanding it….

The Pernicious Myth That Slideshows Drive ‘Traffic’ by Alexis Madrigal:

…If you’re trying to juice page views, your staff will ineluctably be forced to make galleries. Where else can they get a 10x or 20x multiplier on their work? I can guarantee you that will not help you break the kinds of stories or do the kinds of analysis that will keep people coming back. Not only that, but it’s demoralizing to your best people, the ones who want to be out there producing their best work.

Worse, readers may click through your slideshow, but they’ll hate you a liiitttle bit more than they did when they got to the site. And I bet they’ll feel the same way about whatever advertiser was unlucky enough to get stuck on the page with some stupid thing that a reporter did with a little bit of hate in his heart and fingertips. ….

#Arseniclife link collection

Native arsenic, by Aram Dulyan at Wikimedia Commons.

Over the past year or so I have been diligently collecting all the links related to the (in)famous #arseniclife affair at my old blog. Links are, especially later in the process, more or less in the chronological order. I guess it will be easier for me to update, and easier for people to find it, if I re-post it here:

Mono Lake bacteria build their DNA using arsenic (and no, this isn’t about aliens) and Science gets it (mostly) wrong again: My take on the NASA astrobiology paper and Lots of Ink for a few extremophiles: We’ve been invaded by aliens, Monolakians, from the Duncecap Galaxy and When life gives you arsenic, make arsenate-backboned DNA, non-alien Halomonadaceae!

Preliminary Thoughts on the “Arsenic-Based Life” Paper and Ordinary evidence would do

The Real Scoop on Aliens Oops Arsenic in Old Lakes and Bacteria Use Arsenic As Basic Building Block In A Pinch and Poison Nil: Mono Lake Bacterium Exhibits Exotic Arsenic-Driven Biological Activity and Arsenic and Odd Lace and It’s not an arsenic-based life form.

Arsenic and Old Lakes: NASA Finds Life NOT As We Know It and Arsenic-Eating Bacteria Expands Definition of Life and It Came From Mono Lake and Complete heresy: life based on arsenic instead of phosphorus and Bacteria eat arsenic – and survive!

Arsenic-associated bacteria (NASA’s claims) and Arsenic-permissive bacteria – implications for arsenical cancer chemotherapy and Are there viruses of arsenic-utilizing bacteria? and The ‘Give Me a Job’ Microbe

Of Arsenic and Aliens and NASA’s real news: bacterium on Earth that lives off arsenic! and Close Encounters of the Media Kind and A Life Less Ordinary and Life With Arsenic: Who’d Have Thought? and Medicine! Poison! Arsenic! Life itself!

Why “alien” life, aka arsenic-loving bacteria, embargo fiasco was deja vu for Sun Spaceman Paul Sutherland and Did you know you could have bet on the NASA arsenic-based bacteria find? and On science blogs this week: Alien abductions and Nasa dismisses criticism of ‘arsenic bacteria’ research

Arsenic-Eating Bacteria May Not Redefine Life, But Could They Be Useful in Oil Spill Cleanup? and A new life form? Not so fast and Arsenic and Old Lace and Arsenic-Based Life

The Wrong Stuff: NASA Dismisses Arsenic Critique Because Critical Priest Not Standing on Altar and NASA: science shouldn’t be debated in media and blogs?! and Not getting it and “This Paper Should Not Have Been Published”: Scientists see fatal flaws in the NASA study of arsenic-based life.

Unquestioning dogma: the gatekeepers of science and Death for “Arsenic-Based Life”? and My summary of NASA’s arsenic-thriving bacteria story and Arsenic and Bacteria: “nothing in that paper is going into my biochemistry textbook” and Why was #PLoS ONE blamed for the media hype about the Darwinius and Red Sea papers, but when it comes to the latest overblown #Science paper, it is #NASA that’s blamed for the hype? (same applies to Venter’s synthetic life: Venter gets the blame not Science) and Heavy Metal

And the skeptics keep chiming in…George Cody on arsenic life and NASA discovers life on Earth and Extraordinary claims attract extraordinary blogging and The Value of Blogs and Ordinary evidence would do

[guest post: Alex Bradley, PhD] Arsenate-based DNA: a big idea with big holes and On how science happens – Case Study: NASA, Arsenic, and Controversy and Is That Arsenic-Loving Bug — Formerly an Alien — a Dog?

Hat die NASA Aliens gefunden? (natürlich nicht) and Die Arsen-Bakterien: Doch ein lohnendes Forschungsobjekt? and Science Is Sexy: Why Do NASA’s New Arsenic Bacteria Matter? and NASA’s arsenic microbe science slammed and Inside scoop from the NASA man who was way ahead of the rest of NASA on those Mono microbes with arsenic in their genes.

NASA’s new life form: Underwhelming? and Did NASA really find new life? and NASA’s Arsenic-Eating “Alien” Bacteria Is More Like Science-Fiction and Was NASA’s big announcement a big mistake? and NASA’s Arsenic-Loving Bacteria Don’t Love Arsenic After All, Critics Say.

An arsenic bacteria postmortem: NASA responds, tries to pit blogs vs. “credible media organizations” and The Right Place for Scientific Debate?: Scientists snub media as controversy over arsenic-eating microbes rolls on and Hey, NASA: this is what peer review actually looks like.

The dubious arsenic bacterium and Life on Arsenic? and NASA arsenic story – let’s lay off the personal attacks on all sides and Scientific dissention: shouldn’t we all be nice? and Arsenic about face and My Letter to Science and DNA, Phosphorus, and Arsenic and NASA can’t have it both ways.

Wolfe-Simon et al Comment: 08 December 2010 and Scientists: NASA’s claim of microbe that can live on arsenic is ‘flawed’ and Did NASA follow its own code of conduct in announcing the arsenic bacteria study? (Hint: No) and Post-publication peer review in public: poison or progress?

Of arsenic and aliens: What the critics said and Falsehoods associated with the arsenic-thriving bacteria story: What it is and what it isn’t and Critics raise doubts on NASA’s arsenic bacteria and Three Tales of Arsenic Tolerant Bacteria

Robert Sheldon, ID proponent, defending the arsenic bacteria paper? Oh dear God. and Arsenic Bacteria Breed Backlash and Don’t Like Arsenic Bacteria? Put Your Experiment Where Your Mouth Is! and GFAJ-1: Get Fighting And Jousting! and Albert Eschenmoser and I Had Arsenic for Lunch

Arsenic bacteria – a post-mortem, a review, and some navel-gazing and Of Arsenic, Slime Molds, and Life on Other Worlds and On science blogs this week: Arsenic bugging and Science Weekly: The arsenic bacterium that could help find life in outer space

Aliens, arsenic and alternative peer-review: Has science publishing become too conservative? and Arsenic up for Review and Arsenate redux and No-one cuts deeper than a Science Blogger. and Your daily dose of arsenic: On the Madeleine Brand Show on KPCC

The Agency That Cried “Awesome!” and Arsenic and Primordial Ooze: A History Lesson and Poisoned Debate Encircles a Microbe Study’s Result and How to harness distributed discussion of research papers and Molecular evolution of an arsenate detoxification pathway by DNA shuffling

If a Microbe Can Do It…: Finding Happiness Even Amid Toxicity (this one is total crap, but what do you expect from HuffPo)

Science Weekly: The great arsenic bacteria backlash and Good Science or good publicity? and Arsenic And Peer Review and Communication – it’s not just for cells and MEDIA ADVISORY: M10-167 and Ambitions of an Early Career Scientist? and Scientific knowledge – getting closer to the right answer

Where can we find arsenic in a DNA structure? and Not Exactly Rocket Science etc -The Great Monolakian Arsenic Issue and its quick rise to fame and flame and The Arsenic Chronicles and In Search of Life: SETI has come a long way over the years, but is the search really important? and Just to be clear: Ed Yong does read the primary literature

Calling Dr. Kane and A new kind of life? and Response required and More on Arsenic Bugs – Nature responds to the blogosphere

The arsenic post I never wrote and What Alien Bacteria Can Teach Us About Health PR and Response to Questions Concerning the Science Article, A Bacterium That Can Grow by Using Arsenic Instead of Phosphorous (PDF) and Real science – warts and all

Arsenic bacteria study authors respond to critics and Using the ‘arsenic bacteria’ story as a teaching moment for undergraduates

A Funny Arsenic Smell Upstream — What questions is it fair to ask about squishy science? and Comments on Dr. Wolfe-Simon’s Response and Yet another reason why the Wolfe-Simon conclusion is so improbable and Arsenic and Old Wounds

Scientists and the News Media: Arsenic-Based Life Forms a Case Study? and Arsenic Bacteria 4: The Quest for Peace and Confused about Arsenic

Exclusive Interview: Discoverer of Arsenic Bacteria, in the Eye of the Storm and #ArsenicLife #Fail: A teachable moment and Response to the critics.

Phosphorus beats arsenic…by a factor of seventeen powers of ten and An arsenic-laced bad-news letter: Who is the audience for online post-publication peer review?

Added four months later:
Arsenic life, four months later: pay no attention to the internet and Arsenic life, four months (and a bit) later: Reviewers with shovels and Comment posted on Rosen paper and Response from Drs. McDermott and Rosen about their arsenic paper and Arsenic Author Dumps Peer Review, Takes Case to TED and Felisa Wolfe-Simon (of arsenic infamy) is no more convincing in person than in print

And another couple of months later:

Science Publishes “Arsenic is Life” Critiques. Game On., Arsenic, RNA, and the unpleasant aftertaste of hype, The Discovery of Arsenic-Based Twitter, “The Center of Gravity Has Shifted.” Carl Zimmer on the Arsenic Paper, Critics weigh in on arsenic life.

Arseniclife: The formal critiques and the authors’ responses, Wolfe-Simon et al.’s responses to my comments, How to test the arsenic-DNA claims, How might a bacterium evolve to use arsenic in place of phosphorus?.

Arsenic-based bacteria: Fact or fiction?, Critics take aim at NASA ‘arsenic life’ study, Debate over arsenic-based life enters a new chapter, Science Publishes Multiple Critiques of Arsenic Bacterium Paper

#arseniclife, peer review, and the scientific process, High Impact Science in a Hyperactive Media Environment, Arsenic life – more criticism, formally published, Post publication peer review – a new way of doing science?.

Were my original #arseniclife criticisms overly personal?, Examples of good astrobiology please, Further panning of the arsenic life claims, Minding the As and P: Can Arsenic Substitute for Phosphorus or Not?.

What the Coburn report has in common with arsenic life, Finding the truth is a waste of time, scientists say, Does Arsenic Really Exist in the DNA from GFAJ-1?, The Arsenic Paper is out, along with eight critiques.

Return of the Arsenic Bacterium, Felisa Wolfe-Simon Does NOT Get It, Arsenic-based life debate continues, Follow arsenic life science “live”.

From the shadows to the spotlight to the dustbin – the rise and fall of GFAJ-1, Arsenic bacteria have changed science…science education that is.

Just in case I do decide to test the #arseniclife …, Working safely with arsenic (what I’d need to know), Guest post about #arseniclife, Starting to work with GFAJ-1!, They’re here!, Counting the GFAJ-1 cells, Vitamins are for wusses (#arseniclife), Why would GFAJ-1 grow much better on agar than in liquid?, Maybe it’s the water? Or the tubes?

It’s not the water, nor the tubes, nor the parafilm…, No excuses… , More detailed plans, GFAJ-1 (no real progress to report), Life and death of GFAJ-1…. and many more posts detailing the process of replicating the research.

Scientist in a Strange Land and Arsenic is Life and the View From Nowhere and #ArsenicLife Goes Longform, And History Gets Squished and Tom Clynes on arsenic life.

Arsenic, quasicrystals and the myth of the science martyr