Category Archives: Science Reporting

Science Communicators of North Carolina (SCONC) events for December

The editors of American Scientist magazine invite you to join them next week for the current installment of the fabled Pizza Lunch Seminar. This time, they have invited Alan Finkel, a neurologist at UNC Hospital, to describe his studies on migraines, cluster headaches and other, similarly delightful topics next Wednesday, December 5 at 12:00 noon at the Sigma Xi Center in RTP. The official title of his talk is “Headaches and Migraines: Causes, Treatments and Effects on Behavior.” To put people in the right “frame of mind,” a continuous loop of Alvin & the Chipmunks’ “Chipmunk Song (Christmas Don’t Be Late)” will be playing in the lobby. (Just kidding!) RSVP to Chris Brodie by Tuesday, December 4.
This month’s SCONC meeting will be a holiday party on Thursday, December 13 at 5:30 p.m. at the Burroughs Wellcome Fund in RTP. Come celebrate or commiserate (as you wish!) with the colleagues who know what it’s like to wade through jargon. Rage at the crass commercialism of the holidays by dining on food bought with someone else’s money. Raise a glass to cheer the health of science communications in North Carolina. Ho Ho Ho! RSVP to Russ Campbell by Thursday, December 6.

Boston – Part 2: Publishing in the New Millennium

It’s been a while since I came back from Boston, but the big dinosaur story kept me busy all last week so I never managed to find time and energy to write my own recap of the Harvard Conference.
Anna Kushnir, Corie Lok, Evie Brown, Kaitlin Thaney (Part 2 and Part 3) and
Alex Palazzo have written about it much better than I could recall from my own “hot seat”. Elizabeth Cooney of Boston Globe has a write-up as well. Read them all.
So, here is my story, in brief….and pictorial, just like the first part (under the fold).

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I Wish I Could Be There

The fifth Science Festival is going on right now in Genoa, Italy. It is a longish affair, from 25th October till 6th November, so if you just happen to be in the area you can still make it. They have hundredr of events, e.g., exhibitions, workshops, performances and shows, all related to science in some way and targeted at a broad audience, from children to senior scientists.
I wish I could attend the session on Rhythms of Life as well as the one on Where is Science Dissemination Going?:

Nowadays, almost 2/3 of press agency releases on scientific topics are based on news given by press offices. The development of public relations activities and the search for media visibility by research institutions are only two of the most important factors that have led to a change in the panorama of scientific public communication, thus influencing its field of research as well.
In the US, the number of people working in public relations is now far greater than the number of journalists; the Internet has now revolutionised both the chronological sequence and the solidity of those “filters” that formerly marked the milestones in the dissemination of results from the researcher to the wider public.
We need to look at these profound changes and at their mutual interactions in order to understand the role played by communication in modern science.

Perhaps there will be some kind of recording of the session, or I may be able to get a summary from someone. I’d like to know how many science bloggers are there in Italy. I know one of my posts was translated into Italian and posted on one of their blogs. So was one of Mo’s posts. How organized are they? Do they meet up in Real Life sometimes? Anyone liveblogging the Science Festival?

Blogging on Peer Reviewed Research Icons Inauguration Day!

If you are a regular reader of this blog, you may have seen this, this and this, i.e., an effort to design an icon that a blogger can place on the top of a post that discusses peer-reviewed research. The icon makes such posts stand out, i.e., the readers will know it is not a discussion of a press release or media reporting, or fisking of a crackpot, a meme, or showing a cute animal picture.
So, I am please to announce that the icons are here! Dave Munger explains.
BPR3%20icon-samples.png
Pick up the codes for icons on this page. Carefully read the Guidelines before you start using the icon.
See who is using the icon already, by visiting this page so you can see the examples.
The blog-posts that use the icon will be aggregated in the nearest future on the BPR3 blog. So, get started today!
I went back last night and added the icon to a number of appropriate posts of mine – I have linked to them again under the fold. You can see that I actually sometimes write (or at least used to) about REAL science!

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Felice Frankel wins The Lennart Nilsson Award for science photography

Nobel Prizes are not the only awards given in Stockholm these day. Karolinska Institute also gives an annual Lennart Nilsson Award for photography. This year’s prize has just been announced and I am happy to report that the recepient is a friend of mine (and Scifoo camper), Felice Frankel for her amazing science photography. From the Press Release:

Felice Frankel, a scientific imagist and researcher at Harvard University’s Initiative in Innovative Computing, has been named the recipient of the 2007 Lennart Nilsson Award. Frankel was sited for creating images that are exquisite works of art and crystal-clear scientific illustrations – both fascinating and valuable to the general public and scientific community alike.
The Lennart Nilsson Award is given out annually in honour of the internationally celebrated Karolinska Institutet photographer. As with the Swedish photographer’s own images, Felice Frankel’s work reveals previously invisible aspects of the world in unique, novel ways. Her subjects range from nanotechnology to magnetism and the surface tension of water droplets.
“In studying Ms. Frankel’s work, I recognize my own way of looking at the world. We share the same passion for using images to explain and communicate science,” says Lennart Nilsson.
In selecting Felice Frankel, the board of the Lennart Nilsson Foundation stated: “Those viewing Ms. Frankel’s images are initially captivated by their form and colour. No sooner is their curiosity aroused than they want to know what the photograph depicts. She has thus fulfilled a scientific reporter’s paramount task: to awaken people’s interest and desire to learn.”
Felice Frankel began her academic career in biology, but then moved on to architectural and landscape photography. During a fellowship year at Harvard’s Graduate School of Design, she turned once again to science, beginning work in her present specialty. Today, she is a Senior Research Fellow at the Initiative in Innovative Computing at Harvard University and also holds an appointment as a research scientist at the Massachusetts Institute of Technology (MIT).
Throughout her professional life, Felice Frankel has worked to make visual imagery a key tool in scientific communication. Her photographs, like Nilsson’s, have often been reproduced on the covers of leading science magazines like Nature and Science. She writes a regular column in American Scientist, and has published a series of books. Her latest — Envisioning Science: The Design and Craft of the Science Image (MIT Press, 2002) — is a guide to creating visual scientific images that convey research to a wider audience. Felice Frankel lectures regularly about scientific photography and new methods of using images to improve the teaching of science.
The Lennart Nilsson Award was established in 1998 and is administered by Karolinska Institutet in Stockholm, Sweden. The Award of 100,000 SEK (approximately 15,600 USD) will be presented in Berwaldhallen concert hall in Stockholm on the first of November 2007. The occasion will also host the annual installation of professors at Karolinska Institutet, Sweden’s largest centre for medical research and training and the home of the Nobel Assembly. Lennart Nilsson will be present at the ceremony.

World Health Organization breaks embargo and messes up.

Before two papers passed the peer-review and got published, WHO (which was given the data) made its own interpretation of the findings and included it in its press kit, including the errors they made in that interpretation. A complex story – what’s your take on it?

Science 2.0 at SILS

Yes, I’ll be there this Friday. Come by and say Hello if you are in the building or close at lunchtime.

Image and Meaning

If I was not already scheduled to appear on a panel in Wisconsin at the same time, I would have loved to go to this:

The fourth Image and Meaning workshop, IM2.4, part of the Envisioning Science Program at Harvard’s IIC will be held Oct. 25 and 26, 2007, Thursday and Friday, at the Hilles library on the Harvard campus. Application deadline is September 17, 2007
Scientists, graphic designers, writers, animators and others are invited to join us and LEARN FROM EACH OTHER while exploring solutions to problems in the visual expression of concepts and data in science and engineering. This will be a workshop in the truest sense: small, interdisciplinary groups discussing and working collaboratively to tackle challenges created by the participants themselves.
Experience gained from three highly successful workshops around the country over the past year will inform the structure of the October program to be hosted by Harvard. Previous participants have told us in their evaluations that they have found useful connections between fields as well as new ways of looking at and solving problems in their own work. We are confident it will be so again in IM2.4, the last of the IM2.x cycle of workshops presented with major funding from the National Science Foundation.
Because of the immersive nature of the workshop, it will be imperative for each participant to attend the entire program, from the opening session at 3 PM Thursday, October 25, through the evening and a full day Friday, October 26. Four meals will be provided. The cost is $150 per person for non-Harvard participants.
Information can be found at: http://www.imageandmeaning.org/. Click on ‘How to Participate’ in the left navigation bar. For further information, please contact Ruth Goodman, Program Manager: im2.xworkshops@gmail.com
We encourage you to spread the word to your students and colleagues.

Bloggers For Peer Review Icon Contest

The BPR3 icon contest just got even richer. It’s worth your time and energy!

Bloggers for Peer-Reviewed Research Reporting

Dave announced that the contest for the icon for denoting posts covering peer-reviewed research is now open. Use your creative skills and/or spread the word.

Nature mission (sic) statement

Maxine Clarke:

In printing the statement verbatim every week as we have done, making it clear when it originated, we have hitherto assumed that readers will excuse the wording in the interests of historical integrity. But feedback from readers of both sexes indicates that the phrase, even when cited as a product of its time, causes displeasure. Such signals have been occasional but persistent, and a response is required.

Suzanne Franks:

Who needs outright discrimination? It’s so much more pleasant and civilized to discriminate while pretending to be inclusive. It’s just one tiny step sideways, but in the right direction to deflect real and meaningful change. It’s just our small way of saying “patriarchy RULES!”

Chris Surridge:

I had always thought it was a disclaimer when quoting text letting me indicate that I know there is an error in the text but that I am quoting verbatim. Basically [sic] says “I didn’t make a mistake, the error is in the original”. Now it seems we can use it to indicate that we disagree with the original wording and are sure that the author would too if they were around to ask.

Bill Hooker:

So now at least I know what it is that I disagree with. I don’t think NPG should link to the 1869 statement, at least not without going through the modern version, as Nature (the journal site) does. I think the print journal should print the modern mission statement — with, if they want a nod to their impressive history, a comment to the effect that apart from updating sexist and exclusive language, not much has changed from the original (which is visible on our website, etc etc).

Suzanne Franks 2:

Well, I’m sorry, but much of my original critique remains unchanged. I don’t care if you have a nice new online mission statement. If you want to keep printing your old sexist one every week then contextualize it as a historical document and explain that it is sexist and outdated and was outdated at the time it was published and is included here only as another example of how women were explicitly excluded in the past. And contextualize it that way every time you print it, every week, not once in an editorial. That tiny little [sic] does not do the job. What it does is say “we know this is wrong but we don’t care, we are going to keep printing it anyway”. Continuing to print it uncontextualized each week says “we revere this bit of our history so much that we want you to read it every week. And we don’t really care all that much that it is sexist, ’cause we think it rocks so much!”
As I said in a comment, imagine the historical mission statement said “for scientific white men”. Would you still feel comfortable printing it every week? Would you feel that just inserting a little [sic] after it was a sufficient gesture to allow you to keep printing it unmodified? I’m guessing it’s less likely the answer would be yes.

Thoughts?

SciVee.com

Video is taking over science communication. And why not? Now that paper is outdated, the limitations of that ancient technology should not apply to scientific publishing any more. Just because paper cannot support movies does not mean that modern scientific papers should shy away from using them.
Last week saw the launch of SciVee, essentially an aggregator of science movies. Now, you may ask – why do we need yet another one of those sites? There are several out there already. Journal of Visualized Experiments is a real journal – the videos are submitted and reviewed first and, if accepted, the authors are supposed to pay a fee to have the video published. All the videos accepted are grouped into Issues, they get DOI numbers and there is a way to refer to them as citations in future papers (or videos!). Lab Action is similar in style, but more like YouTube, i.e., people freely upload the videos which are subsequently rated and commented on by users. SciTalks is also YouTube-ish, but instead of experiments, it has lectures by scientists and science writers/journalists. So does VideoLectures. On the other hand, ScienceHack is a serach engine for science-related videos. Nature Preceedings allows the upload of a few different types of files, and will likely include videos in the future, I guess.
So, how is SciVee.com different?
First, SciVee was built in partnership with The Public Library of Science (PLoS), The National Science Foundation (NSF) and The San Diego Supercomputer Center (SDSC), so it has broad institutional support right from the start.
Second, SciVee allows only the upload of movies associated with papers published in Open Access Journals. Richard Cave explains. The format of the video will vary. The first one up is essentially the author’s summary narrated into the camera. The others will demonstrate experimental technique, or display animal behavior relevant to the paper, etc. So, if you publish a paper in an Open Access journal, you can upload it to SciVee and the two spaces where the video appears will automatically link to each other. If you find a video by searching SciVee, you will be able to click on a link and read the paper. If you read the paper which contains a video, a single click will get you to SciVee where you can find related videos, videos by the same authors, etc. This cute flow-chart explains the potential of this system far better than I can put into words.
Deepak Singh, Kambiz Kamrani and Attila Csordasz have already posted their first impressions. You can also see the first reviews on Slashdot, If:Book, Mashable, InformationWeek, NewTeeVee, The Q Function and many other blogs. Check it out.

Image And Meaning

Why are all the cool meetings happening all in the same week? On top of three I will attend, there is another one I just heard of that sound really cool:

The fourth Image and Meaning workshop, IM2.4, part of the Envisioning Science Program at Harvard’s IIC will be held Oct. 25 and 26, 2007, Thursday and Friday at the Hilles library on the Harvard campus.
Application deadline is September 17, 2007
———————————————————————–
Scientists, graphic designers, writers, animators and others are invited to join us in exploring solutions to problems in the visual expression of concepts and data in science and engineering. This will be a workshop in the truest sense: small, interdisciplinary groups discussing and working collaboratively to tackle challenges created by the participants themselves.
Experience gained from three highly successful workshops around the country over the past year will inform the structure of the October program to be hosted by Harvard. Previous participants have told us in their evaluations that they have found useful connections between fields as well as new ways of looking at and solving problems in their own work. We are confident it will be so again in IM2.4, the last of the IM2.x cycle of workshops presented with major funding from the National Science Foundation.
Because of the immersive nature of the workshop, it will be imperative for each participant to attend the entire program, from the opening session at 3 PM Thursday, October 25, through the evening and a full day Friday, October 26. Four meals will be provided. The cost is $150 per person for non-Harvard participants.
Information can be found at: http://www.imageandmeaning.org/

Science in The Simpsons

Michael Hopkin interviewed Al Jean, the executive producer of The Simpsons show, about math and science, sometimes central, sometimes hidden, in the episodes of everyone’s favourite show…

Science Blogging at Duke

Duke University, after years of being behind the curve, is now striving mightily to establish itself as a leader in online science communication. As a recent news article shows, the school is activelly encouraging its students to keep blogs and make podcasts.
I have already mentioned Sarah Wallace and her blog about genomics research in Chernobyl.
Nicholas Experience is a blogging/podcasting group working on environmental science (OK, Sheril is their most famous blogger, but she did it herself, without being prompted by the Nicholas Institute).
At the Howard Hughes Precollege Program Summer 2007, 15 local high school students blog about doing research in the life sciences at Duke University.
Finally, 30 undergrads are writing fascinating stuff about their research experiences, each on a separate blog, with the central place (with a complete blogroll on the right sidebar that I urge you to explore) being the Student Research at Duke blog.
Much of that activity can be traced back to an old blogger meetup and, now that Anton Zuiker is starting to work on their health/science/medicine communications this week, Duke really has a chance to become cutting edge.

Sex On The Brain (of the science reporters)

Sex On The Brain (of the science reporters)This post was a response to a decent (though not too exciting) study and the horrible media reporting on it. As the blogosphere focused on the press releases, I decided to look at the paper itself and see what it really says. It was first posted on August 09, 2005. Under the fold (reposted on July 12, 2006)…

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Evolution in NY Times

You probably know by now, but you can access for free (at least for a couple of days) a whole slew of articles about evolution on the Science page of New York Times. Most are excellent, as usual (hey, it’s not the front page or some lukewarmly-pro-creationist he-said-she-said op-ed they tend to publish every now and then).
Most of the blogospheric responses are to the article by Douglas Erwin. As always, framing something as conflict sells the paper. I don’t think we are all eagerly awaiting a ‘paradigm shift’ in evolutionary biology. Much of the new thinking has been around for decades and is rapidly being absorbed into an ever-richer and ever-better scientific edifice. The best commentary comes from Larry, Greg, PZ and Jason.
Another NYT article I liked was about microbial evolution, written by my SciBling Carl Zimmer.
Finally, Jonathan is not 100% happy with the collection of quotes they put there.

Talking To The Public

So, Anton Zuiker and I went yesterday to the Talking To The Public panel discussion at Duke, organized by Sigma Xi, The Council for the Advancement of Science Writing and The Duke Institute for Genome Sciences & Policy.
There is nothing yet on their websites about it (the 20th century school of thought!), but the entire panel discussion was taped and I’ll let you know once the video is available online (in a week or so?). Once everything is online, it will also be easier for me to write in great detail (links help!) about the event.
It was nice to see David Jarmul and Rosalind Reid again as well as to finally meet Karl Leif Bates (about whose recent activity I will blog a little later).
The panelists were Richard Harris, Joann Rodgers, Cristine Russell and Huntington F. Willard.
Of course, recent blogospheric discussions about science journalism and about framing science were fresh in my mind as I was listening to the panel and the audience.
Harris did the best thing: he played us a short audio of an interview with a Nobel Prize winner conducted one day after the prize was announced. The question was to explain briefly what the research was about. To a journalist. After a few minutes the entire audience at Duke laughed – we were all scientists and not a single one of us understood any of the scientific jargon. I still have no idea if the guy got his Nobel for physics, chemistry or physiology (certainly not for literature!). This really drove home the point that so many of us are so engroessed with our day-to-day research and discussing it with people who are “in the know” that many of us are incapable of recognizing that 99.999999% of the Earth’s population have no idea what you’re talking about!
Harris said that he recently spent some time with a couple of scientists, doing a story that will air in a couple of weeks. He got the absolutely best explanation of the research (on climate science) one day when the 5-year old son asked his Dad something about it and Dad explained it. Bingo! When you talk about your science – think “Five Year Old”! And you’ll get it right. As Harris said – nobody’s ever complained you made it too simple in an interview.
Much of the advice to scientists and to journalists has already been covered by many participants in the blogospheric debate about science journalism. The only one that was new to me was the advice to scientists to ask the journalists questions as well – make it a two-way interview. And in the end, when you explain your work to the journalist, ask the journalist to explain it back to you. That way you’ll know if the message got through or not. If not, keep repeating and rewording it until you get the person to be able to explain it back to you in a satisfactory manner. Then, the published article will likely be OK as well.
The entire debate just reinforced my earlier observation that scientists want to educate, while journalists want to inform. The former pitch to an audience with an assumed scientific background, the latter know that the audience does not know what DNA is and thus pitch much lower. The former insist on accuracy, the latter on relevance. The former eschew the narrative and the anecdotes, the latter know that those are necessary ingredients of a news story without which nobody will read it. But, as I said before, if the two parties are aware of this discrepancy, the two can work together to produce an article that is satisfactory to both.

Media Coverage of Science

I am looking in the closet to see if I can find my tie, because I am going to this in an hour – a very bloggable event:

A Lunch and Panel Discussion
TALKING TO THE PUBLIC: How Can Media Coverage of Science Be Improved?
Friday, June 22, 12-1:30 p.m. at Duke University, Bryan Research
Building, Rm 103, 421 Research Drive, Durham
Sigma Xi, The Scientific Research Society, The Council for the
Advancement of Science Writing (CASW) and The Duke Institute for Genome
Sciences & Policy invite you to a lunch and panel discussion on science
and the media. Scientists and journalists face challenges in explaining
science-and its implications-to the public. A panel of award-winning
science journalists will provide practical advice for scientists about
improving communication with the public through the media.
Panelists:
RICHARD HARRIS, Science Correspondent, National Public Radio, reporting
for
Morning Edition, All Things Considered and Weekend Edition
JOANN RODGERS, Executive Director, Media Relations and Public Affairs,
Johns
Hopkins Medicine; book author; and co-author of studies on genetics and
the media
CRISTINE RUSSELL, CASW President; Harvard Kennedy School of Government
journalism fellow; and former Washington Post science reporter
Discussant: HUNTINGTON F. WILLARD, Director, Duke Institute for Genome
Sciences & Policy (IGSP)

To Educate vs. To Inform

You may be aware of the ongoing discussion about the tense relationship between scientists and science journalists. Here is the quick rundown of posts so far:
Question for the academic types–interview requests
The Mad Biologist and Science Journalists
Science Journalists are NOT the Problem
Just don’t quote me
Science and the Press
Scientists and Journalists, Part Deux
Scientists in the Media
Science/journalists update redux: Mooney chimes in
Science and journalism
Journalists and scientists – an antimatter explosion?
Madam Speaker, I Yield My Remaining Time to the Paleontologist from the Great State of California
Scientists and Journalists, Redux
Scientists and journalists, still going….
[More:
Science and Journalism
On dealing with journalists
Scientists and journalists
Scientists and the Media
Education and Media Relations
Lying to Children about Drugs
Press releases and the framing of science journalism]
Very smart stuff in posts and comments, to which it is difficult to add anything very new and creative. But….
Everyone is afraid to use the F word, but the underlying tension is, at its core, the same as in the discussion of Framing Science:
The scientists want to educate.
The journalists want to inform (if not outright entertain, or at least use entertaining hooks in order to inform).
There is a difference between the two goals. The former demands accuracy. The latter demands relevance. As long as both parties are aware of the existence of two disparate goals, there is a possibility of conversation that can lead to an article that satisfies both goals, thus both participants.
Media is not the place for education and scientists need to understand this simple fact. But media is great at attention-getting, so those who are intrigued by a news report can follow up and get educated on top of getting informed.
I was never interviewed about my research. If I was, I suspect I’d have some horror stories to tell because I’d have been tempted to educate instead of inform. All the articles for which I was interviewed (linked below the fold), either by professional journalists or by other bloggers, were about the Conference, the Anthology, or about science blogging in general. I have nothing but positive impressions of the people who conducted the interviews.

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The 2006 Impact Factors are now avaliable

The 2006 Thomson Scientific Journal Citation Reports were released today. Mark Patterson reports on the PLoS journals, three of which have made it to the list for the first time, as they are too new, so their ratings are based on just a portion of the time:

The 2006 impact factors have just been released by Thompson ISI. The first two PLoS journals continue to perform very well: 14.1 for PLoS Biology (14.7 in 2006); 13.8 for PLoS Medicine (8.4 in 2006). The PLoS community-run journals also received their first impact factors: 4.9 for PLoS Computational Biology; 7.7 for PLoS Genetics; and 6.0 for PLoS Pathogens. (Note that the latter impact factors are based on only around six months worth of publications in 2005, and are likely to increase next year.)
Although the impact factor is an over-used and abused measure of scientific quality, it is a journal metric that is important for the research community, and so until there are alternatives, PLoS has to pay attention to the impact factor.

PLoS-ONE, if I am correct, should appear in the Report next year.
Also, for my circadian readers, it may be of interest how our flagship journal, Journal of Biological Rhythms fared. Here is from the e-mail from the Editor:

I’m happy to report that JBR’s Impact Factor has increased! JBR’s 2006 Impact Factor is 4.633, compared to 4.367 for 2005. JBR is now ranked 7/64 in the Biology category (compared to last year’s 8/65) and 8/79 in the Physiology category (compared to last year’s 8/75).

Update: Alex has access, so he pulled out a few more ratings for top journals.

So, which cover do you like better?

This one?
Or this one?
Framing Science is not just verbal. Visual aspects are also important.

PLoS 500

Yesterday, PLoS-ONE celebrated the publication of the 500th paper (and additional 13). Here are some quick stats:

1,411 submissions
513 published paper
360 member editorial board and growing
19 day average acceptance to publication
600+ post publication comments posted

I am assuming that the remaining 898 manuscripts are in various stages of the publication process: rejected, in review, in revision, or in the pipeline to appear on the site any day now.
The very first paper was published on December 20, 2006. The 500th paper is this one “Climate Change Cannot Explain the Upsurge of Tick-Borne Encephalitis in the Baltics”, which is quite an interesting read (and I wonder if global warming denialists will try to misuse it in the near future).
Since I got the job with PLoS-ONE I’ve been asked some questions about it (even though I’m just an egg: I will start working a month from now) which reveal some misunderstandings about this journal. So I looked around the site and I asked some PLoS people trying to find the right answers.
First, the word ONE in its title suggests that this is meant to become the flagship journal in the PLoS stable and a direct competitor to Science and Nature. Sure, but that does not mean that the format and the publishing philosophy is the same as those two journals. ONE refers more to being the first (and so far unique) journal using the 21st century model of publishing, rather than to the ambition to reach the #1 spot on the Citation Index.
The hardcopy journals are limited by the size of their journal – how many papers can appear each week? Being entirely online, PLoS has no such space constraints. So PLoS-ONE does not seek only spectacular papers or revolutionary (thus potentially wrong) papers on topics with potentially wide interest. Everything that is well done and well written and passes the peer-review, no matter how specialized or obscure the field, will be accepted. As Chris Surrige, the managing editor of PLoS-ONE explained to me:

ONE certainly isn’t meant to be Science or Nature. What we wanted with ONE was for it to be ONE place to contain all of science. Supremely broad and deep. We want to publish papers that could have been published in Science or Nature AND papers that would otherwise have been heading for the most specialist of specialist journals. PLoS ONE is supposed not to fit within the current hierachy of journals, it stands outside it as an alternative not to any journal in particular
but to ALL conventional journals.

This also means that papers from all areas of science are welcome (excepting, perhaps, meta-science papers, e.g., in history, sociology and philosophy of science). For now, most of the papers published so far are in the biology/genetics/medicine areas, which is understandable as the researchers in these areas are already familiar with the publishing philosophy of PLoS through its other journals. But PLoS-ONE is trying to expand its scope to all the other disciplines as well and is welcoming the brave, enterprenurial people who are willing to break the ice and submit the first manuscript in their area od study (and hopefully bring in other colleagues as well).
These and many other questions have already been discussed (and surely will be in the future) on the PLoS blog which should be your regular read (dig through the archives as well – there is some good and important stuff there). The instructions for submission of manuscripts are clear and detailed: it is fast and streamlined, but it is most definitely peer-review.
Anyway, my job will not be on the publication end of the process, but on the post-publication end – the post-publication peer-review of sorts. PLoS-ONE allows and encourages scientists and other educated readers to annotate the papers and to post comments/discussions on papers. You can read about those here and try it out in a neutral space (if you are still nervous about annotating/discussing a real paper) here. My goal, among others, will be to bring in more people to the site to discuss papers and to develop ways to make this activity worth people’s time and effort (on top of being fun to do, as we bloggers already know). In this effort, I will occasionally use you – my readers – as my own focus group, asking for your feedback on changes and innovations we will try to implement in the future. Stay tuned. I’ll explain more once I actually start working there.

For European LifeScience Bloggers

It is high time a blogger wins this prize, don’t you think? If you are in Europe or Israel, and you have a life-science blog, apply for this award:

EMBO Award for Communication in the Life Sciences
Call for entries 2007
DEADLINE 30 JUNE 2007
Description of the award
The award is intended for scientists who have, while remaining active in laboratory research, risen to the challenge of communicating science to a non-scientific audience. The winners of the EMBO Award are nominated for the EU Descartes Prize for science communication.
Prize
The sum awarded is Euro 5.000, accompanied by a silver and gold medal inscribed with the winner’s name.
Eligibility
* Scientists working in Europe or Israel at the time of application, who have made an outstanding contribution to the public communication of science via any medium or activity.
* Candidates must be working in active research at the time of application, and should have done most of their communication work in Europe or Israel.
* If written works are to be judged with the application, these must have been published in printed form by the time of nomination. At least one work must have been published in the period 2005 -2007. Works published in any of the languages of the EU will be considered. However, if a published English translation of the work exists, this should be submitted in preference.
* Scientists who are already widely regarded as professional communicators will not be considered for the award.
Applications
Please Note – Applications must be written in English.
Candidates must apply using the official form by the deadline, 30th June 2007. The complete application must be sent to EMBO by post at the address below.
The application must include:
the paper application form. Please download the form here, complete and send.
a letter of support of not more than 2 sides A4, from an independent proposer.
the curriculum vitae of the applicant.
an annex of not more than 2 sides of A4, in which the applicant may refer to works that support her/his application. These may be any forms of communication and outreach activities (e.g. radio and television broadcasts, documentaries, interviews, work in the community, talks in schools, workshops etc). If any of this work is documented in printed form or on the Internet, appropriate references should be given such that the jury can take it into consideration. If video or audio recordings are available, they may also be included.
if applicable, 2 copies each of the applicant’s written works of relevance to science communication. Up to 3 articles may be submitted for consideration. If a copy bearing the name of the publication and date of publication is not available, the applicant must submit the text, and indicate where and when the article was published.
IMPORTANT: applicants are also requested to submit the electronic application form. Applications will not be considered complete without it!
Selection of a winner
Entries will be judged by a multinational jury including the EMBO Science & Society Committee. One winner will be selected. Further awards or recognitions will be made at the discretion of the jury.
The award ceremony takes place during the annual November EMBO/EMBL Joint Science and Society Conference, Heidelberg, Germany.
Please send your entries to:
EMBO Science and Society Programme
Meyerhofstrasse 1
69117 Heidelberg, Germany
Tel. +49 6221 8891 109/119
Fax +49 6221 8891 200/209
email: scisoc@embo.org

Framing science video

The Nisbet/Mooney Speaking Science 2.0 talk is now up on YouTube, as well as here under the fold:

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Lab Action!

Remember back in November, when everyone got excited about JoVe (the Journal of Visulized Experiments)?
Well, it is not alone in its niche any more. There is now another site similar to that: Lab Action.
Of course I homed in onto videos of scoring lobster aggression and Drosophila aggression, but there is quite a lot of other stuff there. It is pretty much like a YouTube for science so feel free to post your contributions.

Let’s try to talk about framing again…carefully…

In small, easily-digestible chunks:
Re-Framing Science While Chris Mooney’s Away..
Framing II: Weapons in the Form of Words
Framing III: Happy Feet
Framing IV: The Lorax Phenomenon
Please go, read and try to comment (politely if you can)…

The Fly Buzz Continues

The Fly Spontaneous Behavior paper is generating quite a lot of buzz.
Bjorn has collected some of the best blogospheric responses, including these from Mark Chu-Carroll, Mark Hoofnagle and Kate.
He also got Slashdotted – of course, whoever posted that on Slashdot failed to a) link to the paper, b) link to the press release and c) link to Bjorn’s blog. Instead, a little blurb from one of the worst media articles from MSNBC is the only link. Those got linked later in the comments, so I hope Bjorn enjoys the traffic (it will go away tomorrow never to come back again).
Bjorn has also posted two good posts about the scientific and popular aspects of the paper that can clear stuff up.

Framing Science – a new page

Chris and Matt just announced their tour as well as a scienceblogs.com page dedicated solely to Speaking Science 2.0. You can check out the original blogospheric responses here (there have been only a few comments since I quit updating that post – most of the debate was highjacked by the interesting, but unrelated, discussion of the fight between religion and reason).

Mike has a great idea

Three out of ten Republican presidential candidates raised hands in the recent debate indicating they do not believe in evolution. Jason has an excellent round-up of responses (Arianna Huffington rocks!) with some good comments by readers as well. How can you help combat scientific ignorance? If your blog is NOT a science blog, try to do what Mike suggests and link to five science-related posts every week.
There is plenty of stuff here at scienceblogs.com, but you can also use this page when you are looking for science posts, especially the science-related carnivals listed at the very bottom of that page. Carnivals act as filters, showcasing the best that science/nature/medical/environmental blogosphere has to offer on any given week.

SBC-NC’08 – we have the venue!

2008NCSBClogo200.pngMaking the second Science Blogging Conference even bigger and better, we are happy to announce that the January 19th, 2008 meeting will be hosted by Sigma Xi (publishers of American Scientist) in their gorgeous new building in the Research Triangle Park. Their conference facilities can house more people (225 as opposed to 170 we had last time) and provide more space for shmoozing between and after the sessions.
For those who arrive early, there will be Friday afternoon events, sessions and meals on or close to the UNC campus. We have tentatively secured two excellent session leaders so far and are negotiating with several others. Please check the program and help us build it by adding your ideas (edit the bottom portion of the wiki page or post a comment there). And we are still looking for sponsors – are you interested?

Global spreading of science blogging – is too slow?

Arunn and Selva are wondering why more Indian scientists don’t write blogs, while Danica wonders the same about Serbian scientists. I guess every nation will have its own idiosyncratic ways of getting there, but it is also important to note that in the USA where most of the popular science blogs are located and where there are LOTS of scientists, only a tiny percentage writes blogs or considers doing so in the future. Canadians, Western Europeans and Australians are already catching up in proportion to their own scientific populations. The rest of the world will probably catch up in a few years as well. It’s just that the Americans started first. Also, it is a matter of perceptions as English-language blogs will be much more likely to become well-known outside the borders of their countries. Are there many science blogs in Chinese or Japanese languages? Perhaps, but we don’t know.

The Cell on science blogging

There is a new (nice and long) article by Laura Bonetta about science blogging in today’s issue of the journal Cell.
Bloggers on A Blog Around The Clock, Pharyngula, Aetiology, Framing Science, The Daily Transcript, Sandwalk, In the Pipeline, Nobel Intent, Useful Chemistry, De Rerum Natura and Panda’s Thumb are mentioned and/or interviewed. A couple of carnivals, e.g., Tangled Bank, Mendel’s Garden and Gene Genie are also mentioned.
For those who have no access to The Cell, I am assuming that each one of us will egotistically quote the part about oneself (like we did last month with The Scientist article), so here are the parts that are about me and then you can go around the other blogs to see their excerpts – once you put that all together you’ll have the whole article, I bet:

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Framing Global Warming

NPR has started a year-long series on climate called Climate Connections. The other day, they broadcast the first in a series of their educational segments, starting at the very beginning: the carbon atom. You can read the intro here and watch the video here but just listening to the audio in the car was absolutely fascinating (the video is close, but much shorter and not identical to the first quarter of the audio segment for which the podcast is at the “listen” button).
The science was very basic yet completely correct and the entire segment was so fun to listen to. It was fast and funny, and there were no big words like “covalent bond” or “valence” that would make the piece sound like a lecture. In five minutes or so of listening, my son and I learned (or remembered) everything important about the properties of carbon and how that affects climate change. And it was all through silly metaphors!
Importantly, the entire story was very carefully framed – yes, the F-word! At the end of the segment you are going to think along these lines: carbon atoms have no choice but to behave the way they do; scientists can only discover properties of carbon but they cannot do anything to change the properties and behavior of the carbon atoms; humans are the only players in this story with the power to alter their own behavior and it is up to us as a society, as well as us as a collection of individuals, to make choices about modifying our behaviors in a way that takes into account the unchangeable properties of carbon atoms.
Of course, for those who want to learn more and are not afraid of big words, NPR has also posted this interview online. Framed differently for different audiences, the video (low level), audio (middle) and online text (high) – yet the final result is the same: a better understanding of the science underlying global warming.

More on duck phalluses and uteri

Of course, I was not the only one commenting on the recent duck phallus paper. You should check out the other blogospheric responses, e.g., by Carl, PZ, RPM, Grrrl, Laelaps, Neil, Belle, Zuzu, Guru and many others.
Unfortunately, most people link only to each other, or to the press release, or to the NYTimes article. The articles are fine, but they are simplified for the mass audience. If you are a scientist, you should read the original paper to get all the details.
Furthermore, many commenters on blogs have asked some very good questions about the research which remained unanswered, e.g., about the teleological language used in the article, the male bias, the individual variation within species, the season-to-season changes in males, and the appropriateness of the use of terms like “rape” in the context of animal behavior.
There is a place for asking (and answering, if you have the expertise) those questions – at the discussion forum of the paper itself where two good questions have already been asked. Just click here.

Fair Use and Open Science

Update: The issue has been resolved amicably and Shelley has some further thoughts. And some even more further thoughts. The discussion will continue here on Scienceblogs and elsewhere in the follwoing days….
If you read other Scienceblogs and not just me, you are likely quite aware of the “Wiley Affair”, but if you are not here is a quick summary:

Continue reading

Analytical Chemistry science writer job opening

There is a job opening for a science writer at Analytical Chemistry. If you are a science writer, or you know any science writers (or people who want to be science writers) who want to live in the DC area and have studied science at a graduate level, please encourage them to contact Liz Zubritsky at: e_zub AT acs DOT org.
The job does not require a Ph.D. in science, but only some graduate studies in science, not necessarily chemistry. That is because the job requires reading a lot of scientific papers and the writers have to be able to get a sense of what’s important about a paper quickly.
If you know anyone who might be interested, please share this.

Credit where credit’s due

Science publisher extends journalists’ access:

A leading science publisher is granting journalists from developing countries access to its scientific papers that are not otherwise freely available. Elsevier announced the initiative at the World Conference of Science Journalists in Australia last week (19 April).

I Want This Job!

It has ‘Coturnix’ written all over it, don’t you think? I am even wearing my PLoS t-shirt right now as I am typing this!
But, why is it necessary to move to San Francisco? My wife is terrified of earthquakes and CA is one state she always said she would never move to.
Looking at the job description, everything can be easily done sitting in my pajamas here in Chapel Hill, or on a submarine, or on the Moon. It’s all online:

PLoS ONE Online Community Manager
The Public Library of Science (PLoS) is a non-profit advocacy and publishing organization located in the China Basin area of San Francisco, California. We publish a growing collection of Open Access scientific and medical journals whose complete contents are freely available online. Our long-term goals are to create an online “public library of science” containing every scientific and medical paper ever published, and to develop the information technologies needed to maximize the value of this resource. For more information about PLoS, visit http://www.plos.org/.
Job Description
PLoS ONE is a high volume, efficient and economical system for the publication of peer-reviewed research in all areas of science and medicine. But what makes PLoS ONE really different happens after publication – users are able to annotate, comment on, and rate articles. To facilitate and moderate this post-publication interaction, we’re looking for someone with a scientific background to help guide PLoS ONE through high growth, gather feedback from the online community and keep discussions on topic.
You will be responsible for managing the PLoS ONE user community, monitoring the discussion threads, expanding membership and organically growing the site based on community feedback. PLoS ONE will be adding new technology to foster relationship-building throughout the year and you will help shape this technology. You will also work with focus groups and external communities to gather feedback and promote PLoS ONE.
This should not be your first role with an online community. We would like a couple of years experience working directly within an online community, preferably with an online scientific community.
This is a full-time, permanent position available immediately at our San Francisco office, and we are looking to fill it as soon as possible. Our salaries are competitive for nonprofit organizations, but less than comparable salaries in the corporate environments. Compensation is dependent on qualifications. PLoS offers a benefits package which includes vacation, 401(k), health, vision and dental coverage.
The responsibilities of the Online Community Manager include, but are not limited, to the following:
* Field questions from the online community.
* Work to grow the number of participants and activity on the site.
* Moderate the discussions threads and forums (which will be scientific in nature).
* Help keep the online community free of spam and on topic.
* Create and implement specific policies to guide positive growth in the online community.
* Identify problems and create solutions to social and technical problems in the forums.
* Translate online community requirements into business opportunities.
* Work with marketing team to develop e-marketing campaigns specific to the online community.
* Communicate technical issues to the web team and advise the online community on issues.
* Use an in-house Content Management System to update the website.
* Perform statistical analysis using web logs.
* Upload files to Unix servers using standard and secure FTP programs.
* Carry out other technical and site administration duties as required.
Knowledge Skills and Abilities
* 2-5 years of “hands on” professional experience with moderation and management of online communities, specifically online scientific communities. Compulsive participation a plus.
* Strong understanding of online communities, blogging and current online culture.
* A broad understanding of and enthusiasm for science.
* Strong verbal and written communication skills for monitoring online communication.
* Must work well with others; be willing and able to support end users in a constructive manner.
* Understanding, experience and comfort with Open Source technology.
* Proven ability to effectively analyze and communicate complicated technical and social issues to a management team.
* Good judgment and the ability to handle multiple conflicting goals without active supervision.
* Sense of humor and the ability to handle screaming masses of highly opinionated scientists without going insane.
* A passion for and an understanding of how to leverage Web 2.0 tools for social change.
* Must be passionate about working with the scientific community.
* Excellent analytical and problem solving skills.
Education
* BA Degree or equivalent experience.
Application Procedure
If interested please send resume and cover letter to jobs@plos.org and use the job title as the subject of your email. No phone calls or visits, please. Principals only – email from recruiters will be ignored.

If there is any aspect of this job that you think I am unsuited for, let me know. If there is another person who you think would be a great candidate for this, let that person know.
Update: Actually, a total move to SF is not out of question (now that we discussed this at home). Still, SF is the most expensive city to live in (so people are leaving for the sub/ex-urbs and adding to the rush-hour traffic even more). I was thinking I could start out in SF for a month or two, then work from here and just go to SF when needed.

Covering Science in Cyberspace

Science journalists and science communicators who attended the Knight New Media Center Best Practices: Covering Science in Cyberspace seminar in March 2007 collectively wrote a blog during the meeting:

Two dozen prominent science journalists and science communicators were invited to participate in this special conference with three goals: 1) Identify the critical issues facing science journalists in the digital age; 2) identify innovative forms of multimedia story-telling and presentation of complex issues online; and 3) identify “best practices” for coverage of science issues on digital platforms. Among the topics discussed were:
* Defining exactly what is “science”;
* Revealing untold science stories and determining why they have not been told;
* Exploring visual journalism and digital story telling techniques.
Knight New Media Center welcomes comments from readers related to the journalists’ specific discussions or related to the more general topic of science journalism. To post your comments, please browse the blog posts once the seminar has begun.

There are some interesting entries there.
(Hat-tip: Anton)

Medicine and healthcare communication

Anton just spent a few days attending the AMA’s 27th Annual Medical Communications Conference, where he gave a session about medicine and healthcare blogging. And of course, he blogged about the whole conference here, here, here, here and here. Who knows, there may be more coming. I hope to see Anton next week and pick his brains some more. But you can read his impressions and follow his links for more.

Framing and Truth

Truth, All the Truth, and Nothing but the Truth.
You are all familiar with the phrase. It actually figures prominently (though unspoken until now) in this whole discussion about framing science.
Nobody – absolutely nobody – ever suggests that anything but The Truth should be used when communicating science or communicating about science.
The wisdom of framing is that ‘All the Truth’ can be omitted, as too much information puts off the target audience in some cases, and is thus counterproductive.
The self-styled Defenders Of The Truth insist that a) ‘All The Truth’ should never be omitted, and b) that ‘framers’ want to omit ‘nothing but the Truth”, i.e. to advocate lying. Nothing is further from the Truth.
The important issues of the day – evolution, global warming, stem cell reseach – are too contentious and politically hot. Thus, to illustrate how omitting “All The Truth” does not mean lying, I’ll use the examples from my own reasearh, as far from political (or even politicizable) as can be.
For instance, this is the way some of our data are presented to the peers in the field. Compare that to this treatment of the very same data intended for a different audience – readers of a science blog (some scientists, some interested lay-people, no chronobiologists). There is more background, more explanation of the basics, a more casual English language, and almost no numbers/statistics in the latter. Both contain the Truth and Nothing but the Truth, but the latter is not “All the Truth” as some less relevant information has been omitted. Does it turn it into lying? Not at all. Does it make more comprehensible and interested to a non-expert? Yes. The published paper was read by the dozens, the blog post by the hundreds at least – hundreds who probably could not have understood the published paper anyway and who don’t need all the nitty-gritty details in order to understand it.
Or, how about this example: here is the actual paper, and here is the blog post about it. Not just does the blogpost explain in an easy language what the paper is about, but it also adds the wisdom of several intervening years of research and thinking, i.e., puts the paper in a historical perspective. It also has a slightly different emphasis on what was really important in the paper – something we learned only in hindsight. So, which of the two is The Truth? The paper has all the details and statistics that the blog-post lacks. The blog-post has the post-hoc insights that the paper lacks. Are they, thus, both Lies? No. They are both true, framed for different audiences at different times in history.
How about this one: here is the paper and here is the blog-post. The blog-post puts the data from the paper in a much, MUCH broader context, including data from a number of other papers by other people, and ends with new data that never saw the light of day previously, followed by a novel testable hypothesis that was never included in the original paper. Which one is The Truth? Both, of course. Just framed differently.
Another example: here is the published paper while here and here are two different blog treatments of the same data. The first post explains the data in the paper (sans boring details and numbers) and puts the paper into a historical perspective. It adds some of the background thinking that was not included in the paper – about my motivations for doing the work, about expectations how the data would turn out, the way we responded when the data did not turn out the way we predicted, and the way to see the data from the lens of what we know now seven years later. The second post also describes the data in simple English, yet goes further – by placing the data into a different context (ecological instead of physiological) it ends up proposing a novel hypothesis to be tested in the future. Which of the three treatments are the Truth? All three, of course, but each framed differently.
OK, that was my MS stuff. I am not allowed to tell you the details of my PhD work, but there is a way to frame it so you can understand what it was all about without revealing any specifics.
For instance, if asked by a person (professional or lay-person) interested in evolution, I would describe my PhD work along these lines: “I am interested in evolutionary implications of sex, strain and individual differences in circadian and photoperiodic time measurement in Japanese quail, with potential insight into group selection”.
If asked by a physiologist of some sort, I would describe it like this: “I did studies in the way exposure to sex steroid hormones by embryos and adults affects the way bird brains measure time of day and time of year”.
If asked by someone whose primary interest are humans, I’d say something like this: “I use an avian model to study the way circadian system is altered during adolescence”.
If I were young and single and talking up a girl in a bar where loud music makes language economy an imperative, I’d say “I am a brain surgeon”.
And you know what? All four statements are True. Nothing but the Truth. But obviously not All the Truth. Each emphasizes a different aspect of my work. Each neglects to say that the work is already done and that I have not set foot in the lab for a while. And each is framed for its target audience. The first reflects my real #1 interest and can help bond with a like-minded fellow. The second is my #2 interest, but that is what my Dissertation is supposed to be about and this is the way most people in the field (including my advisor) would like to hear about it. The third is good for selling my work to NIH, but also good for giving a polite answer to a non-scientist friend who asked the question out of being polite him/herself. The fourth emphasizes one of the methods in my toolkit and has a different goal in mind.
Each of the four is framed differently because the audience is different, the question (“What is your research about”) was asked for different reasons, and my goal is different (though establishing my expertise and staking my turf are a common thread to all four): bonding, teaching, persuading, or self-aggrandizing, respectively. And I never inserted a single lie anywhere. Oh, and without knowing any details, you now have a pretty decent idea of my rresearch interests, don’t you?
That is what framing is about. Knowing what your goals is. Knowing what to omit when. And knowing what style of language to use with which audience. No need to ever be dishonest. Leave that to Creationists and Republicans.
But, what really is The Truth in science and in journalism? Oh, do click on that link, I know you want to and it is worth it.
Related:
Framing Science – the Dialogue of the Deaf
Framing ‘framing’
Did I frame that wrong?
Framing and Truth
Just a quick update on ‘framing science’
Joshua Bell and Framing Science
Framers are NOT appeasers!
Framing Politics (based on science, of course)
Everybody Must Get Framed

Framing ‘framing’

As you may have noticed, there is a vigorous debate going on in the blogosphere about framing science (all the links to all the relevant posts can be found if you click on that link).
For the uninitiated, this may look as a big dust-up and bar-brawl, but that is how blogosphere works, ya know, thesis + anthithesis and all. Dialectics, that’s the word I was looking for! Does not mean that Larry Moran and I will refuse to have a beer with each other when he comes to Chapel Hill next time!
The sheer quantity of responses, the passion, and the high quality of most posts, thoughtful and carefully written (even those I personally disagree with) demonstrates that this is a very important topic to scientists and people interested in science. I am really glad that the discussion has started.
The blog posts, as well as numerous comments, are, in themselves data. They show how people interested in science think about the concept of science communication. I am assuming that Matt and Chris will delve deep into them and use these data in further work.
The debate also shows that many people are unclear as to what exactly “framing” is. It also shows that the topic is broad and multi-faceted, as different commenters homed in on different aspects of the idea. This resulted in some misunderstandings, of course, but also brought to light the weaknesses of the ways framing is explained to people unfamiliar with the concept.
In my post (linked above), I tried to divide the concept into two broad categories: short-term and long-term.
The short-term framing operates at the time-scale of seconds. Its goal is to persuade. To make the listener believe that what you say is true.
The long-term framing operates at the time-scale of decades. Its goal is to make new generations much easier to persuade, and once they are persuaded, much easier to teach and inform about science.
A sub-set of responses also deals with the question – who should do it: all scientists, some scientists, or professional communicators (e.g., journalists, writers, pundits). I hope that my post also makes it clear that everyone is a part of the ecosystem, playing a role in the division of labor that most fits his/her temperament and inclination.
The debate also reveals something new to me: an automatic negative emotional reaction to the very word “frame”. This was something new to me and, as it baffled me, I tried to think about the reasons for this. I may be wrong, but I think I figured it out – I am not a native English speaker. Let me clarify….
I grew up speaking Serbo-Croatian. At about the age of 5 I started learning English, first at home, later in school, at a Language Institute and a few summer schools in the UK. For many, many years, the only meaning of “frame” for me was the thing you place a picture in. A picture frame can be a piece of art in itself. A well-chosen frame accentuates the art of the picture. The very act of framing a picture means that you have taken it out of a binder hidden in some dusty corner and are going to display it on a wall. All very positive meanings of the word “to frame”.
I saw “Who framed Roger Rabbit” in translation. I guess I knew the original title and had it stored somewhere in the back of my mind but never thought about what it means.
Then, I started reading Lakoff and other literature on framing. There, I understood the word to be a technical term, pretty neutral, or even a little on the positive side: about how to communicate well.
So, I was taken aback when I saw people responding – really, really fast – to the notion of framing by equating it to some very negative connotations: spin, lying, propaganda, selling-out, washing-down, branding, marketing, etc. Concepts that do not have much really to do with framing and some are actually opposite to it. Why does the word “frame” elicit negative frames?
Scientists are generally pretty intelligent and well educated people, people who could make a killing in a business world. Yet, we chose to forgo the money and fame and pursue the Truth instead. Instead of yachts, Irish Wolfhounds, racehorses, trophy-wives, champaigne baths, caviar dinners and personal jets, we’d rather spend our time in the lab, the field and in the classroom. We hate dealing with bureacracies of all kinds, be it the University administration or funding agencies.
Perhaps we are congenitally ‘allergic’ to the notion of selling. Selling is dirty. Marketing what you are selling is even dirtier. Something to be left to less-than-honest people in the world.
I do not know the backgrounds of all the bloggers who chimed in on this topic, even less the commenters, but I will speculate that people most resistant to the idea of framing are: a) scientists, b) native English speakers, c) quite Left on the political/ideological continuum and d) people who have not spent much time immersed in the cog-sci literature on framing (which may inncoulate one from feeling the negative emotions towards the word). All four. I am a) and c) and that is not enough for me to be hostile to the idea.
Is that true?
Tell me, if your reaction to the word “frame” is negative, why is that so? What, as a non-native English speaker, am I missing?
Related:
Framing Science – the Dialogue of the Deaf
Framing ‘framing’
Did I frame that wrong?
Framing and Truth
Just a quick update on ‘framing science’
Joshua Bell and Framing Science
Framers are NOT appeasers!
Framing Politics (based on science, of course)
Everybody Must Get Framed

Framing Science Update

I have updated my uber-long post about framing science. I added a lot more links to the blogospheric responses, as well as my own response to critics at the very bottom of the post. I have also re-posted it as a Diary on DailyKos which I hope you will visit to see the comments and to recommend (if you are a Kossian).

Amateur Scientists Can Get Published in ‘Science’

Talking about the hermetic cabal of scientists who never let any outsiders in….
Climate change fruitful for fungi:

A remarkable father-and-son research project has revealed how rising temperatures are affecting fungi in southern England.
Fungus enthusiast Edward Gange amassed 52,000 sightings of mushroom and toadstools during walks around Salisbury over a 50-year period.
Analysis by his son Alan, published in the journal Science, shows some fungi have started to fruit twice a year.
It is among the first studies to show a biological impact of warming in autumn.
“My father was a stonemason, and his hobby was mycology,” recounted Alan Gange, an ecology professor at Royal Holloway, University of London.

Hat-tip: Lindsay.

Framing Science – the Dialogue of the Deaf

Blog%20Against%20Theocracy.jpgMy SciBlings Chris Mooney and Matt Nisbet just published an article in ‘Science’ (which, considering its topic is, ironically, behind the subscription wall, but you can check the short press release) about “Framing Science”
Carl Zimmer, PZ Myers, Mike Dunford (also check the comments here), John Fleck, Larry Moran, Dietram Scheufele, Kristina Chew, Randy Olson, James Hrynyshyn, Paul Sunstone and Alan Boyle have, so far, responded and their responses (and the comment threads) are worth your time to read. Chris and Matt respond to some of them. Matt has more in-depth explanations here, here and here (pdf) that are worth reading before firing off a response to the whole debate.
This is not a simple topic, but I will try to organize my thoughts in some way….

Continue reading

How to read a scientific paper

I was waiting until the last installment was up to post about this. Revere on Effect Measure took a recent paper about a mathematical model of the spread of anti-viral resistance and wrote a 16-part series leading the readers through the entire paper, from the title to the List of References and everything in between. While the posts are unlikely to garner many comments, this series will remain online as a valuable resource, something one can use to learn – or teach others – how a scientific paper is to be analyzed.
As you can see, it takes a lot of time to read a paper thoroughly. It also requires some background on the topic of the paper. A journalist on deadline is unlikely to have either the time or the necessary background to be able to read a paper in this manner before writing an article. And that is just one paper per week.
Scientists themselves rarely read all the papers as thoroughly as this. If you, like I do, go through dozens of papers per week, you find your own method of cutting down the necessary time. You skim through the abstract, figures and figure legends, perhaps some of the Discussion and – this is it. You make a mental note what the paper is about and move on. But that is reading for one’s own information only. It is not the way to read a paper one is to comment on – or write an article about. For that, one has to do it throughly, like Revere did.
If a paper is in my narrow field, or a field I am very familiar with, the first place I look is the list of references. This tells me from what tradition the paper comes from, what group of people, what mindset, what research goals and questions. That is, actually, already a LOT of information about the paper. Then I read the abstract, look at the figures and figure legends and, if necessary, scan the text of the Results section to find relevant passages connected to the figure I am interested in. Then I dig deep through the Materials and Methods because that is where flaws, if any, will be discovered. Introduction can usually be skipped – that is mainly for the readers outside of the narrow field. Then I read the Discussion carefully in the very end, by which time I already have a very good idea what the data really say so I can spot if the authors overreach in their conclusions.
As a science blogger, I would not want to write a post about a paper I have not read as throughly as that. I may post a link to it and let you evaluate it for yourself, or point out if some other blogger wrote a good review, but I would not go into a critique of my own if my familiarity with the paper was only superficial, or if it is in a field I do not have a good background in – thus, no reviews of physics papers here!
As this process takes a lot of time and effort, it is not surprising that science bloggers do not post such in-depth reviews very often. I may do one a week if Real Life allows. It is easier, quicker and gets more comments and traffic to write posts that do not require as much expertise and as much time and effort.
But doing it once in a while is still worth the effort. See this latest post on Pharyngula. It is stunning, beautiful, exciting! Yet, this was probably the post that took PZ most time and work to write of all of his many posts this week. And it is likely to get less comments, links and traffic than any of the other posts. But, unlike the commentary about current issues or the daily anti-religion screed (which are all eloquent and lovely and useful and have to be done), this post will not dissappear into the depths of his archives forever. It will remain online (and likely high on Google searches) as a resource that will be linked again and again, for years to come, by other bloggers as well as people who want to use it when teaching biology in the real-world classrooms. The same goes for Revere’s series, or for that matter every serious science post that goes into detail of an area or a single paper and explains it (and perhaps criticizes it) in plain language. There has to be room for all kinds of science blog-posts, each serving a different purpose.
So, bookmark Revere’s series, read it, and save it somewhere handy for future reference.

Two Cultures

Scientists, as a whole, are very reluctant to write novel ideas, hypotheses or data on blogs, and are very slow to test the waters of Open, Source Publishing. Most of what one finds on science blogs is commentary on other peoples’ ideas, hypotheses and data found in journals and mass media.
On the other hand, people in the humanities/literature/art/liberal arts side of campus have long ago embraced blogging as a tool to get their rough drafts out, to refine them upon receiving feedback from commenters, and subsequently publish them in peer-reviewed journals. If you follow History Carnival, Carnivalesque or Philosopher’s Carnival, for example, you have seen many posts that are full-fledged (and full-length) scholarly articles, on their way to “real” publication.
Thus, I found it surprising that it appears the humanities side of the blogosphere is much more reluctant to experiment with some kind of peer-reviewed online publishing model, while the science side appears to be much more enthusiastic about the idea.
This is surprising as there has been gradual evolution – on both science and humanities side of the blogosphere – of the way blog carnivals are done. Besides a few general-interest or geographically limited carnivals, more and more of them are specializing in narrower topics and, thus, require a degree of expertise in the topic in order to participate. I guess that hosts of history and philosophy carnivals received – and promptly rejected – bad posts. I know I did it quite a few times when hosting various science-related carnivals. In several cases, not being really sure and not having relevant expertise on a particular topic mysef, I sent the link to another blogger (and sometimes two or three) for advice about admission into the carnival. That is, for all purposes, peer-review.
Having a peer-reviewed online blog/journal is just the next logical step (unless you have ambitions to start another thing like PLoS).
Putting such a collection together and then turning it into a hardcopy book is something that the science side of the blogosphere did a few months ago, when we put together, as a pretty collective effort, the Science Blogging Anthology. If you recall, the submissions were peer-reviewed. And the next years’ edition, besides having two editors instead of one, will also be peer-reviewed in some fashion (so please send in your entries so we have something to review).
I would love to see this become a more usual kind of thing to do. I’d love to see publication of blogging anthologies collecting the best annual output by medical, environmental, education and humanities bloggers. Will someone do it?
And, of course, making such efforts online, without of the added work of turning it into print, should be even easier, dontcha think?

The Scientist article on science blogs

The April issue of The Scientist contains a good article on science blogging, titled Scooped by a Blog by David Secko (Vol. 21, Issue 4, page 21) focusing on publishing data on blogs, running an Open Notebook lab online, and the way blogs are affecting the evolution of science publishing.
The main story of the article is the story about the way Reed Cartwright’s quick comment on a paper led to his co-autorship on the subsequent paper on the topic. But you can read all about it on his blog, including the article excerpt on the story.
Others interviewed for the story are Larry Moran and Jean-Claude Bradley who will, I assume, post something about it soon. The portion of the article about me is under the fold….

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Heureka!

Heureka is an online popular science magazine in Austria which you should check out, especially if you can read German. But some things are in English, including this interview with yours truly…
There also blurbs about it (in German) in derStandard online and hardcopy, as well as on their science blog Sciblog.