ScienceOnline’09 – Saturday blogging

Too tired (and it’s too late) to write anything myself….but others have done it:
Sciencewomen: Overwhelmed at ScienceOnline 2009
Sciencewomen: Open Access publishing at ScienceOnline 2009
Sciencewomen: Alice’s gender and science session: How can we be allies?
Sciencewomen: ScienceOnline09: The day wends on
Highly Allochthonous: Liveblogging from ScienceOnline…
Living the Scientific Life (Scientist, Interrupted): What Happened to Tangled Bank?
Adventures in Ethics and Science: ScienceOnline’09: Managing your online persona through transitions.
Culture Dish: Documents for my ScienceOnline 09 Getting Published Talk
The End Of The Pier Show:
Thoughts from Kansas: Synchronicity
The Intersection: Weekend At ScienceOnline’09
Endless Possibilities v2.0: ScienceOnline’09
Charles Darwin’s blog: A glass of sherry in the direction of those
The End Of The Pier Show: Lines on the First Morning of ScienceOnline09
Deep Thoughts and Silliness: Semi-live Blogging Scienceonline09: Day 1
10000birds: Talking Blog Carnivals at ScienceOnline09
bjoern.brembs.net: ScienceOnline09: Open Notebook Science
bjoern.brembs.net: ScienceOnline09: Midway in the first day
bjoern.brembs.net: ScienceOnline09: Social Networks for Scientists
Crowded Head, Cozy Bed: Science Online Notes
Physics for girls?: ScienceOnline ’09
HASTAC blogs: Liveblogging ScienceOnline ’09: Coffee Cupping Event
HASTAC blogs: Liveblogging ScienceOnline ’09: Race in Science Online and Offline
HASTAC blogs: Liveblogging ScienceOnline ’09: Anonymity and Pseudonymity – Building Reputation Online
HASTAC blogs: Liveblogging Science Online ’09: Social networks for scientists
UDreamOfJanie: Lounging About
Pondering Pikaia: ScienceOnline09 Conference Update
Lots more on Twitter and Friendfeed. Continuing tomorrow….

Clock Quotes

What a phenomenon it has been – science fiction, space fiction – exploding out of nowhere, unexpectedly of course, as always happens when the human mind is being forced to expand; this time starwards, galaxy-wise, and who knows where next.
– Doris Lessing

ScienceOnline09 – Thursday and Friday

scienceonline09.jpg
ScienceOnline09 is in full swing. I don’t have much time and opportunity to go online, as you may have noticed – so many old friends to hug! Already a full day behind us – a lovely dinner at Town Hall Grill last night, Coffee Cupping this morning, Lab Tours in the afternoon (I went to the North Carolina Museum of Natural Sciences), then a quick run home to see Mrs.Coturnix and walk the dog, then back to Sigma Xi, the Friday Fermentable, the Women’s Networking Event and the amazing talk by Rebecca Skloot. An hour at the bar listening to ocean-bloggers singing shanties, then, exhausted, time to go back home and see what people have blogged about it all so far. Check it out:
Thursday, January 15th, 2009:
Thoughts from Kansas: Deep ScienceOnline ’09 Thoughts
Laelaps: Almost time for Science Online ’09!
Deep Sea News: Out of the Depths, We are Reborn! (again)
Adventures in Ethics and Science: On my way to ScienceOnline’09
The Beagle Project Blog: ScienceOnline09 on my mind
Biology in Science Fiction: I’m Sorry I’ll Be Missing ScienceOnline09
The Oyster’s Garter: Off to Science Online 2009
Urban Science Adventures!: ScienceOnline09 Conference Begins
Lecturer Notes: SO’09 I’ve Arrived
Greg Laden: Live Blogging the NC ScienceOnline 09 Conference
Deep Thoughts and Silliness: Arrived in NC
Cephalopodcast: The Invertebrate Wars Redux
Malaria, Bedbugs, Sea Lice, and Sunsets: Science Online 09: A Field Guide
Highly Allochthonous: Coming to America
Skulls in the Stars: Off to ScienceOnline ’09!
Friday, January 16th, 2009:
Etherized: ScienceOnline09 Conference in Raleigh, NC
Adventures in Ethics and Science: ScienceOnline’09: Liveblogging Coffee Cupping at Counter Culture Coffee
Gobbledygook: ScienceOnline09: Providing public health and medical information to all
Greg Laden: Live Blogging the NC ScienceOnline 09 Conference
The End Of The Pier Show: Lines Written Over Breakfast, Friday 16 January
Greg Laden: Janie Belle has Entered the Building
Laelaps: Made it!
Expression Patterns: Friday Fermentable Liveblog
Deep Thoughts and Silliness: ScienceOnline09: live-blogging the wine tasting
Bioephemera: ScienceOnline09!
Adventures in Ethics and Science: ScienceOnline’09: Liveblogging Coffee Cupping at Counter Culture Coffee.
Adventures in Ethics and Science: ScienceOnline’09: Liveblogging a Friday Fermentable wine-tasting.
Sciencewomen: Friday Night at ScienceOnline
Pharyngula: Heat wave!
Science After Sunclipse: ScienceOnline’09: The Conference That Rhymes
Thesis – with Children: ScienceOnline’09
Urban Science Adventures!: ScienceOnline09 Conference Begins
Thesis – with Children: Liveblogging – with Wine
Malaria, Bedbugs, Sea Lice, and Sunsets: Science Online 09: The Limitations Of Iconography
bjoern.brembs.blog: ScienceOnline09: FridayFermentable liveblogging wine tasting
The Flying Trilobite: Arrival at ScienceOnline ’09
FairerScience Weblog: Waiting for the wine tasting
Mistersugar: ScienceOnline’09 is on
Pondering Pikaia: In Which I Venture North for Blog Fun
Endless Forms: In Which I Venture North for Blog Fun
Check the rest here.
Follow the conversations also on FriendFeed, Facebook and Twitter and check out the pictures on Flickr.

My picks from ScienceDaily

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Clock Quotes

True science investigates and brings to human perception such truths and such knowledge as the people of a given time and society consider most important. Art transmits these truths from the region of perception.
– Leo Nikolaevich Tolstoy

Praxis Blog Carnival – Your Graduate Guide To Succeeding In 2009

Praxis #6 is up on Podblack Cat

My picks from ScienceDaily

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Darwin and Evolution talks in North Carolina

I get e-mails about such events, so I thought I’d share, so you can attend some of these talks if you want:

NCSE’s executive director Eugenie C. Scott will be speaking twice in North Carolina shortly.
First, at 7:00 p.m. on January 27, she will be speaking on “Darwin’s Legacy in Science and Society” in the Wright Auditorium on the East Carolina University campus in Greenville. “Charles Darwin’s publication of On the Origin of Species in 1859 was an extraordinary milestone for science, but it also had profound effects on theology, philosophy, literature, and society in general. Nowhere is this more true than in the United States, where the teaching of evolution has been contentious since the early part of the 20th century. Why have Darwin’s ideas been so valuable — and yet so controversial? The answers lie not in science, but in history and culture.” Admission is $10; free to ECU faculty, staff, and students. For further details, visit:
http://www.ecu.edu/voyages/
Second, at 7:30 p.m. on January 29, she will be speaking on “Why Evolution Is Taught in North Carolina Schools” in the Burney Center on the University of North Carolina, Wilmington campus. “The North Carolina science education standards have received high marks from national evaluators. They require the teaching of what scientists and teachers consider important for students to learn, including evolution. Why do scientists and teachers feel so strongly that evolution should be part of the curriculum? And why do some parents object to their children learning it?” Admission is free and open to the public. For further details, visit:
http://library.uncw.edu/web/outreach/evolution/events.html

Edward J. Larson will be speaking on “The Scopes Trial in History and the Theatre” at 8:00 p.m. on January 22, 2009, in the Farthing Auditorium on the Appalachian State University campus Boone; the event is free and open to the public, so please spread the word!
A professor of law at Pepperdine University, Lawson wrote Summer for the Gods, a Pulitzer-Prize-winning history of the Scopes trial and its impact, as well as Trial and Error, the definitive legal history of the creationism/evolution controversy.
Larson’s talk is part of Appalachian State’s extensive lecture series in honor of Darwin’s bicentennial. Among the other speakers in the series are NCSE’s executive director Eugenie C. Scott (who spoke in September) and NCSE Supporters Michael Ruse, Kenneth R. Miller, Sean Carroll, and Niles Eldredge.
For a press release about the lecture series, visit:
http://www.news.appstate.edu/2008/09/02/darwin-bicentennial-series-features-lectures-films-and-theatre-presentations/
For a poster advertising the series, visit:
http://universityforum.appstate.edu/

Carl Zimmer
“Darwin and Beyond: How Evolution Is Evolving”
February 12, 2009
6:30 pm – 7:30 pm
Talk Overview: Charles Darwin launched the modern science of evolution, but he hardly had the last word. In fact, today scientists are discovering that evolution works in ways Darwin himself could not have imagined. In my talk I will celebrate Darwin’s achievements by looking at the newest discoveries about evolution, from the emergence of life to the dawn of humanity.
Please join us for a Darwin Day presentation by Carl Zimmer. Mr. Zimmer is well known for his popular science writing, particularly his work on evolution. He has published several books including Soul Made Flesh, a history of the brain, Evolution: The Triumph of an Idea, At the Water’s Edge, a book about major transitions in the history of life, The Smithsonian Intimate Guide to Human Origins; and his latest book Microcosm: E. coli and the New Science of Life. Mr. Zimmer contributes to the New York Times, National Geographic, Discover, Scientific American, Science, and Popular Science. He also maintains an award winning blog The Loom.
Location:
North Carolina Museum of Natural Sciences
11 W. Jones St.
Raleigh, NC 27601-1029

Today’s carnivals

Four Stone Hearth (58th Edition) is up on Moneduloides
Skeptics’ Circle #103 is up on Bug Girl’s Blog

Clock Quotes

Dullard, n. A member of the reigning dynasty in letters and life. The Dullards came in with Adam, and being both numerous and sturdy, have overrun the habitable world. The secret of their power is their insensibility to blows; tickle them with a bludgeon and they laugh with a platitude. The Dullards came originally from Boeotia, whence they were driven by stress of starvation, their dulness having blighted the crops. For some centuries, they infested Philistia, and many of them are called Philistines to this day. In the turbulent times of the Crusades they withdrew thence and gradually overspread all Europe, occupying most of the high places in politics, art, literature, science, and theology. Since a detachment of Dullards came over with the Pilgrims in the Mayflower and made a favorable report of the country, their increase by birth, immigration, and conversion has been rapid and steady. According to the most trustworthy statistics the number of adult Dullards in the United States is but little short of thirty millions, including the statisticians. The intellectual centre of the race is somewhere about Peoria, Illinois, but the New England Dullard is the most shockingly moral.
– Ambrose Bierce

New scienceblogs.com blog – White Coat Underground

Can’t say “welcome a new SciBling” because he’s not new! PalMD is now flying solo! He moved out of the fraternity house and rented his own house: White Coat Underground. Go say Hello, bookmark, susbcribe, update your feeds, whatever you like to do, but keep reading Pal.

ScienceOnline’09 – introducing the participants 10

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The interest in the conference was overwhelming this year. When we opened the registration back in September we did not expect that we would have to close it in less than three weeks, already over our maximal number of 200. As a result, our waitlist got bigger and bigger and, occasionally, as someone would cancel, we could invite someone from the waitlist to register.
About a dozen people held off until the end, hoping they would still be able to make it, but had to cancel over the last week or two. In their place, we invited several people from the waitlist (and yes, we are still over capacity, and hope everyone will take the crowding with good humor). Let me introduce them today:
Arikia Millikan is everybody’s favourite intern here at scienceblogs.com and she blogs on Page 3.14. She will join Erin Johnson in presenting Scienceblogs.com at the conference.
Clark Boyd is the Technology Correspondent for PRI’s The World.
Joshua Rosenau is my SciBling, over at Thoughts from Kansas, as well as the Public Information Project Director at NCSE.
Christopher Conklin works for Blogads, the Chapel Hill based pioneering online advertising company.
Jason Smith is the Associate Editor and webmaster at UNC’s Endeavors magazine.
Nathan Swick blogs on The Drinking Bird and is a Scholarship Coordinator at the UNC-Morehead Planetarium & Science Center.
Benjamin Schell, Christopher Perrien and Tessa Perrien write for Science in the Triangle, an evolving experiment in community science journalism and scientific-community organizing.
Catherine Clabby is an Associate Editor and Katie Lord is the Associate Publisher at American Scientist magazine.
Karen Ventii is a science writer and a (former, but nobody is really “former”) SciBling (at Science To Life).
acmegirl is a blogger on Thesis – with Children.
KT Vaughan is the Pharmacy Librarian, a blogger on Pharmacy Librarian and Clinical Assistant Professor in the School of Pharmacy at UNC.
Harvey Krasny is the Founder of CaroTech, LLC.
Caroline McMillan is a journalism student at UNC, the Co-Editor-in-Chief of Carrboro Commons and Editor-in-Chief of ‘Rivals’ magazine (yes, UNC and Duke students can work together!).
Leah Gordon is the Knowledge Management Specialist at MEASURE Evaluation Carolina Population Center at the University of North Carolina at Chapel Hill.
Allison Gruber is a science writing student at Duke University.
Angela Czahor is a science writing student at Duke University.
Alexandra Levitt is a science writing student at Duke University.
Grace Baranowski is a science writing student at Duke University.
Diane Bosnjak is an AIBS/COPUS organizer of Year of Science 2008.
Nancy Shepherd, MBA PhD is the President and CEO at Shepherd Research, LLC
Soumya Vemuganti is a graduate student at UNC in the Departnent of Cell and Developmental Biology, she is starting to write for an online health website and interested in pursuing a career in medical/science writing.
Elie Dolgin is associate editor at The Scientist
Chris Nicolini is the Web Producer and Editor for the American Institute of Physics
Pamela Reynolds is a Graduate Student in the Biology Department at UNC.

ScienceOnline09 – virtual participation

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It’s here. The first traveling participants are arriving tomorrow! Anywhere between 200 and 240 people are expected at any given time during the three days of the conference, with another 60+ people, regrettably, remaining on the waitlist even after some last-minute cancellations allowed us to invite a couple of dozen waitlisted folks. The waitlisted locals are welcome to add their names to extra events, e.g., meals or lab tours if there are empty slots remaining, just to meet the participants face-to-face if they want to.
Those who will be here in person will get to meet each other in Real Life. But others can also participate and follow from the distance in various ways. The Demos will be screencast and most of the sessions will be either live-streamed or recorded and all the videos will be deposited or linked to somewhere on the wiki. More details about this later.
Throughout the conference, your best starting point will be the Live Coverage page which will be enriched over the next day or two to provide more content.
There will be ongoing discussions on Facebook, on FriendFeed and Twitter (use the scio09 hashtag).
Tag your Flickr images with scio09 as well.
If you blog about it, made sure that there is a term or link to scienceonline09.com somewhere in your post, so I can find it and, whenever I can, add it to the Blog and Media Coverage page.
And finally, don’t forget that each session has its own wiki page where discussion is supposed to take place.

My picks from ScienceDaily

Continue reading

Today’s carnivals

Carnival of the Liberals # 82 is up on Accidental Blogger
The 159th Carnival of Homeschooling is up on Alasandra’s Homeschool Blog

Clock Quotes

Don’t be dismayed at goodbyes. A farewell is necessary before you can meet again. And meeting again, after moments or lifetimes, is certain for those who are friends.
– Richard David Bach

New and Exciting in PLoS ONE

There are 17 new articles in PLoS ONE today. As always, you should rate the articles, post notes and comments and send trackbacks when you blog about the papers. You can now also easily place articles on various social services (CiteULike, Connotea, Stumbleupon, Facebook and Digg) with just one click. Here are my own picks for the week – you go and look for your own favourites:
Mitochondrial Phylogeography Illuminates the Origin of the Extinct Caspian Tiger and Its Relationship to the Amur Tiger:

The Caspian tiger (Panthera tigris virgata) flourished in Central Asian riverine forest systems in a range disjunct from that of other tigers, but was driven to extinction in 1970 prior to a modern molecular evaluation. For over a century naturalists puzzled over the taxonomic validity, placement, and biogeographic origin of this enigmatic animal. Using ancient-DNA (aDNA) methodology, we generated composite mtDNA haplotypes from twenty wild Caspian tigers from throughout their historic range sampled from museum collections. We found that Caspian tigers carry a major mtDNA haplotype differing by only a single nucleotide from the monomorphic haplotype found across all contemporary Amur tigers (P. t. altaica). Phylogeographic analysis with extant tiger subspecies suggests that less than 10,000 years ago the Caspian/Amur tiger ancestor colonized Central Asia via the Gansu Corridor (Silk Road) from eastern China then subsequently traversed Siberia eastward to establish the Amur tiger in the Russian Far East. The conservation implications of these findings are far reaching, as the observed genetic depletion characteristic of modern Amur tigers likely reflects these founder migrations and therefore predates human influence. Also, due to their evolutionary propinquity, living Amur tigers offer an appropriate genetic source should reintroductions to the former range of the Caspian tiger be implemented.

A Trivers-Willard Effect in Contemporary Humans: Male-Biased Sex Ratios among Billionaires:

Natural selection should favour the ability of mothers to adjust the sex ratio of offspring in relation to the offspring’s potential reproductive success. In polygynous species, mothers in good condition would be advantaged by giving birth to more sons. While studies on mammals in general provide support for the hypothesis, studies on humans provide particularly inconsistent results, possibly because the assumptions of the model do not apply. Here, we take a subset of humans in very good condition: the Forbe’s billionaire list. First, we test if the assumptions of the model apply, and show that mothers leave more grandchildren through their sons than through their daughters. We then show that billionaires have 60% sons, which is significantly different from the general population, consistent with our hypothesis. However, women who themselves are billionaires have fewer sons than women having children with billionaires, suggesting that maternal testosterone does not explain the observed variation. Furthermore, paternal masculinity as indexed by achievement, could not explain the variation, since there was no variation in sex ratio between self-made or inherited billionaires. Humans in the highest economic bracket leave more grandchildren through sons than through daughters. Therefore, adaptive variation in sex ratios is expected, and human mothers in the highest economic bracket do give birth to more sons, suggesting similar sex ratio manipulation as seen in other mammals.

Reappraising Social Insect Behavior through Aversive Responsiveness and Learning:

The success of social insects can be in part attributed to their division of labor, which has been explained by a response threshold model. This model posits that individuals differ in their response thresholds to task-associated stimuli, so that individuals with lower thresholds specialize in this task. This model is at odds with findings on honeybee behavior as nectar and pollen foragers exhibit different responsiveness to sucrose, with nectar foragers having higher response thresholds to sucrose concentration. Moreover, it has been suggested that sucrose responsiveness correlates with responsiveness to most if not all other stimuli. If this is the case, explaining task specialization and the origins of division of labor on the basis of differences in response thresholds is difficult. To compare responsiveness to stimuli presenting clear-cut differences in hedonic value and behavioral contexts, we measured appetitive and aversive responsiveness in the same bees in the laboratory. We quantified proboscis extension responses to increasing sucrose concentrations and sting extension responses to electric shocks of increasing voltage. We analyzed the relationship between aversive responsiveness and aversive olfactory conditioning of the sting extension reflex, and determined how this relationship relates to division of labor. Sucrose and shock responsiveness measured in the same bees did not correlate, thus suggesting that they correspond to independent behavioral syndromes, a foraging and a defensive one. Bees which were more responsive to shock learned and memorized better aversive associations. Finally, guards were less responsive than nectar foragers to electric shocks, exhibiting higher tolerance to low voltage shocks. Consequently, foragers, which are more sensitive, were the ones learning and memorizing better in aversive conditioning.

Versatile Aggressive Mimicry of Cicadas by an Australian Predatory Katydid:

In aggressive mimicry, a predator or parasite imitates a signal of another species in order to exploit the recipient of the signal. Some of the most remarkable examples of aggressive mimicry involve exploitation of a complex signal-response system by an unrelated predator species. We have found that predatory Chlorobalius leucoviridis katydids (Orthoptera: Tettigoniidae) can attract male cicadas (Hemiptera: Cicadidae) by imitating the species-specific wing-flick replies of sexually receptive female cicadas. This aggressive mimicry is accomplished both acoustically, with tegminal clicks, and visually, with synchronized body jerks. Remarkably, the katydids respond effectively to a variety of complex, species-specific Cicadettini songs, including songs of many cicada species that the predator has never encountered. We propose that the versatility of aggressive mimicry in C. leucoviridis is accomplished by exploiting general design elements common to the songs of many acoustically signaling insects that use duets in pair-formation. Consideration of the mechanism of versatile mimicry in C. leucoviridis may illuminate processes driving the evolution of insect acoustic signals, which play a central role in reproductive isolation of populations and the formation of species.

Serotonin Transporter Genotype Modulates Social Reward and Punishment in Rhesus Macaques:

Serotonin signaling influences social behavior in both human and nonhuman primates. In humans, variation upstream of the promoter region of the serotonin transporter gene (5-HTTLPR) has recently been shown to influence both behavioral measures of social anxiety and amygdala response to social threats. Here we show that length polymorphisms in 5-HTTLPR predict social reward and punishment in rhesus macaques, a species in which 5-HTTLPR variation is analogous to that of humans. In contrast to monkeys with two copies of the long allele (L/L), monkeys with one copy of the short allele of this gene (S/L) spent less time gazing at face than non-face images, less time looking in the eye region of faces, and had larger pupil diameters when gazing at photos of a high versus low status male macaques. Moreover, in a novel primed gambling task, presentation of photos of high status male macaques promoted risk-aversion in S/L monkeys but promoted risk-seeking in L/L monkeys. Finally, as measured by a “pay-per-view” task, S/L monkeys required juice payment to view photos of high status males, whereas L/L monkeys sacrificed fluid to see the same photos. These data indicate that genetic variation in serotonin function contributes to social reward and punishment in rhesus macaques, and thus shapes social behavior in humans and rhesus macaques alike.

Molecular Implications of Repeated Aggression: Th, Dat1, Snca and Bdnf Gene Expression in the VTA of Victorious Male Mice:

It is generally recognized that recurrent aggression can be the result of various psychiatric disorders. The aim of our study was to analyze the mRNA levels, in the ventral tegmental area (VTA) of the midbrain, of the genes that may possibly be associated with aggression consistently shown by male mice in special experimental settings. The genes were Th, Dat1, Snca and Bdnf; the male mice were a group of animals that had each won 20 daily encounters in succession and a group of animals that had the same winning track record followed by a no-fight period for 14 days. Increased Th, Dat1 and Snca mRNA levels were in the fresh-from-the-fight group as compared to the controls. Increased Th and Dat1 mRNA levels were in the no-fight winners as compared to the controls. Significant positive correlations were found between the level of aggression and Th and Snca mRNA levels. Repeated positive fighting experience enhances the expression of the Th, Dat1 and Snca genes, which are associated with brain dopaminergic systems. The expression of the Th and Dat1 genes stays enhanced for a long time.

Today’s carnivals (and calls for submissions)

The next edition of Praxis will be on January 15th 2009, at the Pod Black Cat.
There are only 2 days left until the deadline for the 7th edition of The Giant’s Shoulders, to be held at The Questionable Authority.
Next Carnival of the Liberals will be on Accidental Blogger tomorrow, but you still have a couple of hours left until the submission deadline.
And in the meantime, check out Carnival of the Green #162 now up on Teensy Green and the latest Grand Rounds Vol. 5 No. 17 up on In Sickness & In Health.

Carnival of the Arid – call for submissions

Did you know that the largest desert on Earth is Antarctica? And the second largest is Arctic? And only then comes Sahara!
Well, I knew that because Hal Heathwole taught a Desert Ecology course that many of my buddies in grad school took. But if you don’t believe me, check out the Wikipedia page about deserts.
And then, don’t stop at that. Do you have a blog? If not, start one. If yes, sit down and write a post about a desert. Then send it to the very first edition of the Carnival of the Arid:

Submissions should have something to do with a desert somewhere in the world. (If you’re not sure whether your work is desert-related, check out this definition at Wikipedia, and if you’re still not sure, send it in anyway.) Submissions can be scientific in nature, or history, or travelog. Images are welcome, photographic or otherwise. Discussions of culture and politics are welcome if they’re desert-related. The one restriction, other than geographical, is that — at least when I’m compiling it — paeans to destroying the desert probably won’t make it. (Developers and ORVers take note.) Paeans to preserving or protecting the desert are fine, as are alerts of current pressing issues.

If you are not sure about participating in a carnival, read this first. Then tune in on Saturday for the session Blog carnivals: why you should participate at ScienceOnline’09 and you may change your mind.

Evolution in PLoS ONE

Evolution is the theme of the month for January at PLoS ONE, so we have picked , for your pleasure, some of our papers for the Top picks in Evolutionary Biology. In conjuction with this, I have also conducted an interview with our Evolution Section Editor Dr.Tom Tregenza.
Dr.Tom Tregenza studies sexual selection and sexual conflict in crickets, both in the lab and in the field, and we discuss some of his research in the interview. He is also involved in a collaborative study of the amazing mimic octopus – see the movie below – so I hope you go and check out the interview:

Science 2.0 article quotes four ScienceOnline’09 participants

Science 2.0: New online tools may revolutionize research quotes Michael Nielsen, Eva Amsen, Corie Lok and Jean-Claude Bradley. Article is good but short. If you come to ScienceOnline’09 or participate virtually, you can get the longer story straight from them.

Clock News

Chemotherapy Most Effective At Time Of Day When Particular Enzyme At Lowest Level:

For years, research has hinted that the time of day that cancer patients receive chemotherapy can impact their chances of survival. But the lack of a clear scientific explanation for this finding has kept clinicians from considering timing as a factor in treatment. Now, a new study from the University of North Carolina at Chapel Hill has suggested that treatment is most effective at certain times of day because that is when a particular enzyme system – one that can reverse the actions of chemotherapeutic drugs – is at its lowest levels in the body.

When It Comes To Sleep Research, Fruit Flies And People Make Unlikely Bedfellows:

You may never hear fruit flies snore, but rest assured that when you’re asleep they are too. According to research published in the January 2009 issue of the journal Genetics scientists from the University of Missouri-Kansas City have shown that the circadian rhythms (sleep/wake cycles) of fruit flies and vertebrates are regulated by some of the same “cellular machinery” as that of humans. This study is significant because the sleep-regulating enzyme analyzed in this research is one of only a few possible drug targets for circadian problems that can lead to seasonal affective disorder (SAD), insomnia, and possibly some cancers.

Getting Less Sleep Associated With Lower Resistance To Colds:

Individuals who get less than seven hours of sleep per night appear about three times as likely to develop respiratory illness following exposure to a cold virus as those who sleep eight hours or more, according to a report in the January 12 issue of Archives of Internal Medicine, one of the JAMA/Archives journals.

My picks from ScienceDaily

Continue reading

Clock Quotes

Children are the living messages we send to a time we will not see.
– John W Whitehead

ScienceOnline’09 – the Weather

The weather prediction for this week is cold and clear to partly cloudy. If you are coming from Canada, you’ll probably think that’s warm, but for us here, this is very cold. At least, it appears at the moment, we will avoid snow unlike last year:
NCweather.JPG

Dinosaurs under the microscope: New ways to look at old bones

From SCONC:

The next Sigma Xi Pizza Lunch is noon, THURSDAY. Jan. 22. The title: “Dinosaurs under the microscope: New ways to look at old bones.”
Come hear NC State University paleontologist Mary Schweitzer explain why she rocked science not long ago with evidence that soft tissue survived in a 68-million-year-old dinosaur fossil. Not all fossil experts accept it, but many do. If Schweitzer is correct, she’s found a whole new route to explore the biology and evolutionary lineage of extinct life.
Pizza Lunch is free and open to science journalists and science communicators of all stripes. Feel free to forward this invitation to anyone you would like to see included. RSVPs are required (for a reliable slice count) to cclabby@amsci.org.
Directions to Sigma XI:
http://www.sigmaxi.org/about/center/directions.shtml

My picks from ScienceDaily

Continue reading

Clock Quotes

To say the right thing at the right time, keep still most of the time.
– John W. Roper

Science/Nature things to do in the Triangle, NC

If you live around here or if you are coming early or staying after ScienceOnline’09, you may be interested in science/nature stuff you can see around here. I know, it’s January and some of those facilities are not at their rose-blooming peak, but they are worth a look:
Take a look at the awesome North Carolina Museum of Natural Sciences in Raleigh, Museum of Life and Science in Durham, Hemlock Bluffs Nature Preserve and Stevens Science Center in Cary, Morehead Planetarium and Science Center in Chapel Hill and JC Raulston Arboretum in Raleigh.
I’d also add NC Botanical Garden in Chapel Hill, Sarah P. Duke Gardens in Durham, The Science House at North Carolina State University in Raleigh, Carnivore Preservation Trust in Pittsboro and the fantastic NC Zoo in Asheboro.
Not just for kids – adults will love all of this as well.

Science Saturday: Doctors’ Obligations – ethics by SciBlings

Listen to my SciBlings Janet and Pal,MD discuss scientific and medical ethics:

ScienceOnline09 – Meals

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The Conference is pretty long this year, yet people need to eat!
There will be free food and coffee at Sigma Xi on Saturday and Sunday for breakfast and lunch, as well as a wine-tasting and a cocktail party at the Friday Wise event (though, it is not a full meal – “The networking reception will consist primarily of desserts, wine, coffee, and some non-alcoholic beverages. So unless you want to have dessert for dinner, please make plans accordingly.”).
But, it is a free conference with limited funds, so for other meals you need to pay for yourself. That does not mean you are on your own, wondering around the Traingle trying to find a restaurant. We have organized this for you:
On Thursday afternoon at 6pm, there will be an Early Bird Dinner for which we have a few open slots, so sign up if you can make it. If you are local, offer to give rides to and from Radisson. If you are arriving too late for this, look out for other conference participants at the Radisson bar.
We will all gather for dinner on Saturday night at Radisson. But, we need to know ASAP if you will be joining us (heck, even if you are not registered for the conference and are just a groupie or a fan, you can sign up for this) so we can give the estimated number to the hotel tomorrow. So, please sing up here now!
And feel free to organize smaller group meals or meetups on your own, on the Friday or the Travel and Lodging pages.
The conference is in a few days. You can check the weather here, familiarize yourself with the Program (and add questions and comments to the individual session pages) and with other participants so you can make the best use of your time.

Testing, testing, 1-2-3-

OK, the system is up and running. Let’s see how this new software works!

Clock Quotes

That so few now dare to be eccentric, marks the chief danger of our time.
– John Stuart Mill

Clock Quotes

The exploration and ultimate colonization of the solar system is the only future worthy of truly great nations at this time in history. The Soviets, who cannot even feed themselves, seem to understand this.
– John S. Powers

Note on commenting

If you really, really want to comment on my posts during the upgrade, you can do that on my FriendFeed as all my posts are exported there and you can comment there as well.

Iran swiftly sentences two HIV scientists – perhaps we can exert pressure.

Like we did with the Tripoli Six….
From Declan Butler, reproduced here in its entirety, as it is important:

Iran has summarily tried two of the nation’s HIV researchers with communicating with an “enemy government,” in a half-day trial that started and ended on 31 December in Tehran’s Revolutionary Court. There will be no further court hearings, and a verdict is expected within days.
The brothers, Arash and Kamiar Alaei, who have achieved international acclaim for their progressive HIV-prevention programme, have been held in Tehran’s notorious Evin prison since their arrest last June (see Nature story, subscription required). Kamiar, the younger of the brothers, holds a master’s degree from the Harvard School of Public Health and was to have resumed doctoral studies at the University of Albany’s School of Public Health in New York. Arash, former head of international education and research cooperation at the Iranian National Research Institute of Tuberculosis and Lung Disease, runs a clinic in Tehran. The brothers are not thought to have been politically active.
Jonathan Hutson, a spokesman for the Washington-based Physicians for Human Rights (PHR), points out that the six-month detention itself breached human rights, as it was “largely incommunicado.” Moreover, whereas Iranian law forbids anyone to be held in detention for longer than four months without charges being brought, it only filed the charge of communicating with an “enemy government” in early December.
At the trial, the prosecution also indicted the men on new secret charges. The trial denied the men the right to defend themselves against the new accusations and the right to due process, says Hutson. “The trial was unfair even by the draconian standards of Iran’s penal code,” he says.
In August, the prosecutor publicly accused the men of fomenting a velvet revolution, arguing that they had collaborated with other scientists around the world, including some in the United States, attended international AIDS conferences, and met frequently with AIDS NGOs. “Those are not crimes, that’s good medicine,” says Hutson, adding that it has casts a chilling effect on academic collaboration between Iran and the rest of the world. IIn December, the US National Academies suspended visits to Iran after the temporary detention of one of its officials in Tehran (Nature).
Several human-rights organizations, including PHR and Amnesty International, have called on Iran to allow the men access to lawyers and the right to contest their detention before a judge. The call has been taken up by several scientific bodies, including the International AIDS Society, the Foundation for AIDS Research and the American Association for the Advancement of Science, and thousands of scientists and physicians have signed an online petition.

Yes, sign the petition.
Also see what Revere, Sandy and Greg added to this.

Department of Justice poised to ban all non-dog Service Animals

This is your weekend reading – lots of it, some fascinating, some enraging, but perhaps if enough people are aware and scream loudly enough, something can be done:
Assistance Monkeys, Ducks, Parrots, Pigs and Ducks … Should the law protect them?
More Follow Up on NYT Story About Assistance Creatures
More Assistance Creature Follow Up – The History of Service Monkeys, Plus Monkey Waiters
Newsflash! DOJ ADA Changes Leaked — All Animals Set to Be Banned Except Dogs
DoJ’s Rationale Behind Banning Non-Canine Service Animals
DOJ’s Proposal and Rationale for Allowing Psychiatric Service Animals (dogs only)
Service Animals on the Radio, a Horse Fetching a Beer, Plus Blog Maintenance Downtime

ScienceOnline’09 – Transportation!

scienceonline09.jpg
Well, ScienceOnline’09 is next week!!!
Most of the stuff on the organizational side is now set and we only have a few last-minute things to take care of. But this is a free, community conference – try to get in touch with each other and organize additional meetups, or to help each other in various ways as much as you can.
The most important thing for the guests out of town is to have reliable transportation. Sigma Xi and Radisson are in the middle of the Triangle and public transportation is, well, not so great. So we would like the locals to offer to give rides as much as possible.
First – Radisson provides free shuttle between the hotel and the airport and between the hotel and Sigma Xi. Whe you land at RDU, give the hotel a call and the van will be there in 5 minutes. If you can co-ordinate this with others arriving at the same time, this will make the whole thing more efficient. Then reserve the shuttle back to the airport at the reception desk.
Try to organize large-ish groups to use the shuttle to go to Sigma Xi (and back) so they don’t drive people around one at a time.
I want to ask the motorized locals to visit various pages on the wiki to see who is asking for rides where and when and to offer to give rides.
Rides are especially needed for the Thursday night Early Bird dinner, the Friday morning Science Of Coffee event and for Friday afternoon Lab Tours. All of those events are pretty far away from the hotel and Sigma Xi so I hope the locals offer to help.

Great Experiments as a teaching tool

Chad is musing about teaching a class based on classical experiments in physics:

The idea would be to have students pick one of the classic experiments in science from, say, before WWII, track down the original papers, and read them to work out how things were done (tracing back other references as needed). Then they would look into how the experiment could be updated using more modern technology, and what the pros and cons of the different versions are. Ideally, they would do some version of the experiment themselves, and write up the results as well.

However….

I have very little idea what would count as classic experiments in chemistry or biology, or how you would go about replicating them.

So, let’s help Chad with biology experiments – classical experiments that students can do (so nothing requiring experimentation on vertebrates, for instance). What would those be? Think of different areas of biology: evolution, ecology, behavior, physiology, microbiology, botany….

Today’s carnivals

The Best of Anthro 2008 Prizes, a kind of an annual carnival, is up on Neuroanthropology
Friday Ark #225 is up on Modulator

My picks from ScienceDaily

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Clock Quotes

In every person who comes near you look for what is good and strong, honor that; try to imitate it, and your faults will drop off like dead leaves when their time comes.
– John Ruskin

On Peer-Review

Michael Nielsen posted today the first part of his look at peer-review: Three myths about scientific peer review:

What’s the future of scientific peer review? The way science is communicated is currently changing rapidly, leading to speculation that the peer review system itself might change. For example, the wildly successful physics preprint arXiv is only very lightly moderated, which has led many people to wonder if the peer review process might perhaps die out, or otherwise change beyond recognition.
I’m currently finishing up a post on the future of peer review, which I’ll post in the near future. Before I get to that, though, I want to debunk three widely-believed myths about peer review, myths which can derail sensible discussion of the future of peer review.
A brief terminological note before I get to the myths: the term “peer review” can mean many different things in science. In this post, I restrict my focus to the anonymous peer review system scientific journals use to decide whether to accept or reject scientific papers.

The article immediately sparked a fiery debate, which also yielded some good links, e.g., The purpose of peer review and Peer Review: The View from Social Studies of Science (pdf).
What do you think?

Careful! Your honey may not be what it looks like

Honey Laundering: A sticky trail of intrigue and crime:

“………He was suspected of trafficking in counterfeit merchandise — a honey smuggler.
A far cry from the innocent image of Winnie the Pooh with a paw stuck in the honey pot, the international honey trade has become increasingly rife with crime and intrigue.
In the U.S., where bee colonies are dying off and demand for imported honey is soaring, traders of the thick amber liquid are resorting to elaborate schemes to dodge tariffs and health safeguards in order to dump cheap honey on the market, a five-month Seattle P-I investigation has found.
The business is plagued by foreign hucksters and shady importers who rip off conscientious U.S. packers with honey diluted with sugar water or corn syrup — or worse, tainted with pesticides or antibiotics……….”

Wow! I never thought of that! I had no idea that there was a shortage of honey due to the hive collapse. Read the whole thing.
From….

Today’s carnivals

I and the Bird #91 is up on From the Faraway, Nearby

‘Flies and Projectors and Bears, Oh My!’

Steve Mirsky in Scientific American fisks McCain and Palin campaign anti-science statements (not that the remaining Republicans are any better, but these two were in the spotlight):

You’re not supposed to kick a guy when he’s down.
Of course, in reality, when he’s down is the perfect time to kick him. He’s closer to your feet, for one thing. But the particular kicking I have in mind should be thought of as tough love. These kicks at the freshly defeated McCain-Palin ticket, as I write in early November, are an attempt to knock some sense back into the group of my fellow Americans who seem determined to ignore or even denigrate valuable scientific research because it’s something outside the realm of Joe the Plumber’s daily activities….

And then it gets into the meat of things….

‘Origin of Species’ read-along

Three chapters a week.
First edition (if you know what is good for you).
Here.
With John Whitfield.
First, read this and this as mental preparation.

Hmmm, this blog may be interesting….

My year of flossing:

I flossed again last night.
I’m still waiting for that sense of ambient smugness (my loose translation here of arete, at least as it relates to the Artistotelian aspects of oral hygiene) that usually accompanies my occasional forays into a life of virtue. I think back here to my days spent as a jogger of sorts in the early 1990’s, days well remembered by some friends of mine if only for the gaily-colored yellow tights I would don before pounding up and down the streets of Sunnyvale, Calif. (In fact to this day the cognomen “Bananaman” is still thrown up in my face by some whenever I undertake a new exercise regimen.)
But at least the entwined senses of virtuous persecution and moral superiority were a wonderful relish to the less tangible benefits of sore knees and clownish apparel, all of which raises of course the question of whether a life lived in accordance with the dictates of smugness may be led in any way other than in relationship to the perceived failings of others. But persecution for my flossing has been so far minimal, and I am loathe to inquire too closely into the state of my neighbors’ gums.
(“Neighbors” is here used broadly in the whole Luke 10:25-37 sense, lest folks on the block feel the need to spend their time in my presence with their jaws clamped shut.)

Now THAT’S a niche blog if I ever saw one! Yet fun so far anyway.

A Programming Note

Starting tomorrow at 1pm EST and lasting through most of Saturday (or until it’s done), scienceblogs.com will be undergoing an upgrade to MoveableType4, specially fitted by SixApart for the gigantic network we have here.
What does it mean to you, the readers, and to us, the bloggers?
We will not be able to post any new content during this period.
You will not be able to post comments.

I am sure some bloggers will “front-load” the weekend by posting a bunch of stuff tomorrow morning, so there will be plenty of stuff for you to read.
Some bloggers may post temporarily on their old blogs (check each of your favourite bloggers for notices like this one to see their plans).
Several bloggers will guest-post on Comrade PhysioProf’s blog, letting their inner sailor free – as that is the “F-word obligatory zone”.
Posts scheduled to appear automatically will only show up after the new system is set up, so you’ll have to go back in time to look for those (probably not many).
Once the upgrade is done, posting will be easier and more fun for us, with some additional functionalities.
The look of the blog will stay the same, except that the right-hand margin will get a little narrower (actually reverting to it’s width of several months ago), thus the posts themselves will be a little wider.
Me? I’ll take a break. Have other things to do anyway….

New and Exciting in PLoS this week

Let’s see what’s new in PLoS Genetics, PLoS Computational Biology, PLoS Pathogens and PLoS ONE this week. As always, you should rate the articles, post notes and comments and send trackbacks when you blog about the papers. Here are my own picks for the week – you go and look for your own favourites:

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