New and Exciting in PLoS ONE

60 new articles just got published in PLoS ONE a few minutes ago. Here are some of the greatest hits (IMHO):
LOL-Federer.jpg
Enhanced Temporal but Not Attentional Processing in Expert Tennis Players:

In tennis, as in many disciplines of sport, fine spatio-temporal resolution is required to reach optimal performance. While many studies on tennis have focused on anticipatory skills or decision making, fewer have investigated the underlying visual perception abilities. In this study, we used a battery of seven visual tests that allowed us to assess which kind of visual information processing is performed better by tennis players than other athletes (triathletes) and non-athletes. We found that certain time-related skills, such as speed discrimination, are superior in tennis players compared to non-athletes and triathletes. Such tasks might be used to improve tennis performance in the future.

Effects of Experimental Brood Size Manipulation and Gender on Carotenoid Levels of Eurasian Kestrels Falco tinnunculus:

Animals use carotenoid-pigments for coloration, as antioxidants and as enhancers of the immune system. Carotenoid-dependent colours can thus signal individual quality and carotenoids have also been suggested to mediate life-history trade-offs. To examine trade-offs in carotenoid allocation between parents and the young, or between skin coloration and plasma of the parents at different levels of brood demand, we manipulated brood sizes of Eurasian kestrels (Falco tinnunculus). Brood size manipulation had no overall effect on plasma carotenoid levels or skin hue of parents, but female parents had twice the plasma carotenoid levels of males. Males work physically harder than females and they might thus also use more carotenoids against oxidative stress than females. Alternatively, females could be gaining back the carotenoid stores they depleted during egg-laying by eating primarily carotenoid-rich food items during the early nestling stage. Fledglings in enlarged broods had higher plasma carotenoid concentrations than those in reduced broods. This difference was not explained by diet. In light of recent evidence from other species, we suggest it might instead be due to fledglings in enlarged broods having higher testosterone levels, which in turn increased plasma carotenoid levels. The partial cross-foster design of our experiment revealed evidence for origin effects (genetic or maternal) on carotenoid levels of fledglings, but no origin-environment interaction. These results from wild birds differ from studies in captivity, and thus offer new insights into carotenoid physiology in relation to division of parental care and demands of the brood.

Tune Deafness: Processing Melodic Errors Outside of Conscious Awareness as Reflected by Components of the Auditory ERP:

Tune deafness (TD) is a central auditory processing disorder characterized by the inability to discriminate pitch, reproduce melodies or to recognize deviations in melodic structure, in spite of normal hearing. The cause of the disorder is unknown. To identify a pathophysiological marker, we ascertained a group of severely affected TD patients using the Distorted Tunes Test, an ecologically valid task with a longstanding history, and used electrophysiological methods to characterize the brain’s responses to correct and incorrect melodic sequences. As expected, we identified a neural correlate of patients’ unawareness of melodic distortions: deviant notes modulated long-latency auditory evoked potentials and elicited a mismatch negativity in controls but not in affected subjects. However a robust P300 was elicited by deviant notes, suggesting that, as in blindsight, TD subjects process stimuli that they cannot consciously perceive. Given the high heritability of TD, these patients may make it possible to use genetic methods to study cellular and molecular mechanisms underlying conscious awareness.

Pattern of the Divergence of Olfactory Receptor Genes during Tetrapod Evolution:

The olfactory receptor (OR) multigene family is responsible for the sense of smell in vertebrate species. OR genes are scattered widely in our chromosomes and constitute one of the largest gene families in eutherian genomes. Some previous studies revealed that eutherian OR genes diverged mainly during early mammalian evolution. However, the exact period when, and the ecological reason why eutherian ORs strongly diverged has remained unclear. In this study, I performed a strict data mining effort for marsupial opossum OR sequences and bootstrap analyses to estimate the periods of chromosomal migrations and gene duplications of OR genes during tetrapod evolution. The results indicate that chromosomal migrations occurred mainly during early vertebrate evolution before the monotreme-placental split, and that gene duplications occurred mainly during early mammalian evolution between the bird-mammal split and marsupial-placental split, coinciding with the reduction of opsin genes in primitive mammals. It could be thought that the previous chromosomal dispersal allowed the OR genes to subsequently expand easily, and the nocturnal adaptation of early mammals might have triggered the OR gene expansion.

LOL%20baby.jpgYoung Infants’ Neural Processing of Objects Is Affected by Eye Gaze Direction and Emotional Expression:

Eye gaze is an important social cue which is used to determine another person’s focus of attention and intention to communicate. In combination with a fearful facial expression eye gaze can also signal threat in the environment. The ability to detect and understand others’ social signals is essential in order to avoid danger and enable social evaluation. It has been a matter of debate when infants are able to use gaze cues and emotional facial expressions in reference to external objects. Here we demonstrate that by 3 months of age the infant brain differentially responds to objects as a function of how other people are reacting to them. Using event-related electrical brain potentials (ERPs), we show that an indicator of infants’ attention is enhanced by an adult’s expression of fear toward an unfamiliar object. The infant brain showed an increased Negative central (Nc) component toward objects that had been previously cued by an adult’s eye gaze and frightened facial expression. Our results further suggest that infants’ sensitivity cannot be due to a general arousal elicited by a frightened face with eye gaze directed at an object. The neural attention system of 3 month old infants is sensitive to an adult’s eye gaze direction in combination with a fearful expression. This early capacity may lay the foundation for the development of more sophisticated social skills such as social referencing, language, and theory of mind.

Meta-Analysis of the Effects of Predation on Animal Prey Abundance: Evidence from UK Vertebrates:

Controlling vertebrate predators is one of the most widespread forms of wildlife management and it continues to cause conflict between stakeholders worldwide. It is important for managers and policy-makers to make decisions on this issue that are based on the best available scientific evidence. Therefore, it is first important to understand if there is indeed an impact of vertebrate predators on prey, and then to quantify this impact. Using the UK as a case study, we use a meta-analytical approach to review the available evidence to assess the effect of vertebrate predation on animal prey abundance. We find a significant effect of predators on prey abundance across our studies. On average, there is a 1.6 fold increase in prey abundance in the absence of predation. However, we show significant heterogeneity in effect sizes, and discuss how the method of predator control, whether the predator is native or non-native, and aspects of study design, may be potential causes. Our results allow some cautious policy recommendations to be made regarding the management of predator and prey populations. Meta-analysis is an important tool for understanding general patterns in the effect of predators on prey abundance across studies. Such an approach is especially valuable where management decisions need to be made in the absence of site-specific information.

An Analysis of News Media Coverage of Complementary and Alternative Medicine:

To examine the accuracy and adequacy of lay media news stories about complementary and alternative medicines and therapies. A descriptive analysis of news stories about complementary and alternative medicine (CAM) in the Australian media using a national medical news monitoring website, mediadoctor.org.au. Each story was rated against 10 criteria by two individuals. Consensus scores of 222 news articles reporting therapeutic claims about complementary medicines posted on mediadoctor.org.au between 1 January 2004 and 1 September 2007 were calculated. The overall rating score for 222 CAM articles was 50% (95% CI 47% to 53%). There was a statistically significant (F = 3.68, p = 0.006) difference in cumulative mean scores according to type of therapy: biologically based practices (54%, 95% CI 50% to 58%); manipulative body based practices (46%, 95% CI 39% to 54%), whole medical systems (45%, 95% CI 32% to 58%), mind body medicine (41%, 95% CI 31% to 50%) and energy medicine (33%, 95% CI 11% to 55%). There was a statistically significant difference in cumulative mean scores (F = 3.72, p = 0.0001) according to the clinical outcome of interest with stories about cancer treatments (62%, 95% CI 54% to 70%) scoring highest and stories about treatments for children’s behavioural and mental health concerns scoring lowest (31%, 95% CI 19% to 43%). Significant differences were also found in scores between media outlets. There is substantial variability in news reporting practices about CAM. Overall, although they may be improving, the scores remain generally low. It appears that much of the information the public receives about CAM is inaccurate or incomplete.

Inducible Ablation of Melanopsin-Expressing Retinal Ganglion Cells Reveals Their Central Role in Non-Image Forming Visual Responses:

Rod/cone photoreceptors of the outer retina and the melanopsin-expressing retinal ganglion cells (mRGCs) of the inner retina mediate non-image forming visual responses including entrainment of the circadian clock to the ambient light, the pupillary light reflex (PLR), and light modulation of activity. Targeted deletion of the melanopsin gene attenuates these adaptive responses with no apparent change in the development and morphology of the mRGCs. Comprehensive identification of mRGCs and knowledge of their specific roles in image-forming and non-image forming photoresponses are currently lacking. We used a Cre-dependent GFP expression strategy in mice to genetically label the mRGCs. This revealed that only a subset of mRGCs express enough immunocytochemically detectable levels of melanopsin. We also used a Cre-inducible diphtheria toxin receptor (iDTR) expression approach to express the DTR in mRGCs. mRGCs develop normally, but can be acutely ablated upon diphtheria toxin administration. The mRGC-ablated mice exhibited normal outer retinal function. However, they completely lacked non-image forming visual responses such as circadian photoentrainment, light modulation of activity, and PLR. These results point to the mRGCs as the site of functional integration of the rod/cone and melanopsin phototransduction pathways and as the primary anatomical site for the divergence of image-forming and non-image forming photoresponses in mammals.

LOl%20capuchin.jpgPreference Transitivity and Symbolic Representation in Capuchin Monkeys (Cebus apella):

Can non-human animals comprehend and employ symbols? The most convincing empirical evidence comes from language-trained apes, but little is known about this ability in monkeys. Tokens can be regarded as symbols since they are inherently non-valuable objects that acquire an arbitrarily assigned value upon exchange with an experimenter. Recent evidence suggested that capuchin monkeys, which diverged from the human lineage 35 million years ago, can estimate, represent and combine token quantities. A fundamental and open question is whether monkeys can reason about symbols in ways similar to how they reason about real objects. Here we examined this broad question in the context of economic choice behavior. Specifically, we assessed whether, in a symbolic context, capuchins’ preferences satisfy transitivity – a fundamental trait of rational decision-making. Given three options A, B and C, transitivity holds true if A≥B, B≥C and A≥C (where ≥ indicates preference). In this study, we trained monkeys to exchange three types of tokens for three different foods. We then compared choices monkeys made between different types of tokens with choices monkeys made between the foods. Qualitatively, capuchins’ preferences revealed by the way of tokens were similar to those measured with the actual foods. In particular, when choosing between tokens, monkeys displayed strict economic preferences and their choices satisfied transitivity. Quantitatively, however, values measured by the way of tokens differed systematically from those measured with the actual foods. In particular, for any pair of foods, the relative value of the preferred food increased when monkeys chose between the corresponding tokens. These results indicate that indeed capuchins are capable of treating tokens as symbols. However, as they do so, capuchins experience the cognitive burdens imposed by symbolic representation.

Disturbance of Social Hierarchy by an Invasive Species: A Gene Transcription Study:

Ecological and evolutionary changes in native populations facing invasion by exotic species are increasingly reported. Recently, it has been shown that competition with exotic rainbow trout (Oncorhynchus mykiss) disrupts dominance hierarchies within groups of native Atlantic salmon (Salmo salar). The genetic and molecular actors underlying phenotypic plasticity are poorly understood. Here, we aimed at identifying the genetic and molecular actors contributing to this plastic loss of dominance hierarchies as well as at identifying genes implicated in behaviours related to social dominance. By using microarrays, we compared the genome-wide gene transcription profiles in brains of dominant versus subordinate juvenile Atlantic salmon in presence or absence of a competitive rainbow trout. Adding the trout competitor resulted in dominant and subordinate salmon being more similar, both behaviourally and at the level of brain gene transcription patterns. Genes for which transcription levels differed between dominant and subordinate salmon in the absence of exotic trout were mainly over-expressed in dominant salmon and included genes implicated in protein turnover, neuronal structural change and oxygen transport. Our study provides one of the few examples demonstrating a close interplay between behavioural plasticity and gene transcription, therefore contributing to the understanding of the molecular mechanisms underlying these processes in an ecologically relevant context.

Today’s carnivals

Grand Rounds (4) 38 are up on NHS Blog Doctor
The latest Homeschooling Carnival is up in The Common Room.

Birds In PLoS ONE!

If you are an astute watcher of the PLoS ONE homepage (or the PLoS Blog, or my blog for that matter), you may have noticed that PLoS ONE now has something like a ‘theme of the month’, i.e., a single, broad topic that we highlight in several different ways on the homepage, blog, in e-mails, etc. We check out the most viewed and downloaded papers on the topic and interview the authors and Academic Editors of those papers, etc. Last month, in May, the theme was Cell Signaling. This month, June ’08, the overarching theme is The Birds!
If you search PLoS ONE for bird + avian (keep clicking ‘Next’ at the bottom of the page again and again), you will see that PLoS ONE has published several dozen interesting articles on various aspects of bird biology. Those articles can be roughly classified into three categories:
– evolution/ecology/conservation
– physiology/neuroscience/behavior
– avian flu
Some papers span two or even all three of the topics (e.g., on the way ecology and behavior of migratory birds affects the epidemiology of bird flu). When we checked the stats to see which bird-related papers have been viewed the most, these articles emerged as our Top 5:
Coevolution of Male and Female Genital Morphology in Waterfowl. Interviews with the author and the Academic Editor of this paper can be found here.
A Visual Pathway Links Brain Structures Active during Magnetic Compass Orientation in Migratory Birds (there is also a brief blurb by the author at the above link).
Cross-Clade Protective Immune Responses to Influenza Viruses with H5N1 HA and NA Elicited by an Influenza Virus-Like Particle
Leg Disorders in Broiler Chickens: Prevalence, Risk Factors and Prevention
Cross-Protection against Lethal H5N1 Challenge in Ferrets with an Adjuvanted Pandemic Influenza Vaccine
There will be something new about Birds In PLoS every Tuesday night on the ONE homepage this month, as well as one or two Journal Clubs on bird-related papers (do you want to do one of these – call me). As I am a bird-man myself, this makes me happy. I hope you like what we have as well.

My picks from ScienceDaily – Sleep edition

Circadian Math: 1 Plus 1 Doesn’t Always Equal 2:

Like a wristwatch that needs to be wound daily for accurate time-telling, the human circadian system — the biological cycles that repeat approximately every 24 hours — requires daily light exposure to the eye’s retina to remain synchronized with the solar day. In a new study published in the June issue of Neuroscience Letters, researchers have demonstrated that when it comes to the circadian system, not all light exposure is created equal.

Morningness Is A Predictor Of Better Grades In College:

Morningness is a predictor of better grades in college, according to a research abstract that will be presented on June 9 at SLEEP 2008, the 22nd Annual Meeting of the Associated Professional Sleep Societies (APSS). The study, authored by Kendry Clay, of the University of North Texas, focused on 824 undergraduate students who were enrolled in psychology classes. The subjects completed a health survey which included questions regarding sleep habits and aspects of daytime functioning.

Evening-type College Students On Early Daytime Class Schedules At A Disadvantage:

Eveningness is associated with not only later phases of a person’s sleep-wake cycle, but also with sleep irregularities, more pronounced sleep restriction during the week, and higher sleep compensation on weekends. Evening type college students may, therefore, need a sleep education that helps them adjust to imposed morning schedules, and would probably benefit from later class schedules, according to a research abstract that will be presented on June 10 at SLEEP 2008, the 22nd Annual Meeting of the Associated Professional Sleep Societies (APSS).

Excessive Mobile Phone Use Affects Sleep In Teens, Study Finds:

Teenagers who excessively use their cell phone are more prone to disrupted sleep, restlessness, stress and fatigue, according to a research abstract that will be presented on June 9 at SLEEP 2008, the 22nd Annual Meeting of the Associated Professional Sleep Societies (APSS).

Is ADHD An Advantage For Nomadic Tribesmen?:

A propensity for attention deficit hyperactivity disorder (ADHD) might be beneficial to a group of Kenyan nomads, according to new research. Scientists have shown that an ADHD-associated version of the gene DRD4 is associated with better health in nomadic tribesmen, and yet may cause malnourishment in their settled cousins.

Poor Sleep May Increase Odds Of Emotional, Behavioral Disturbances Including ADHD:

Insufficient sleep among adolescents may not only contribute to lower grades and a lack of motivation, but may also increase the odds of serious levels of emotional and behavioral disturbances, including ADHD, according to a research abstract that will be presented on June 9 at SLEEP 2008, the 22nd Annual Meeting of the Associated Professional Sleep Societies (APSS).

Bright Light Therapy May Improve Nocturnal Sleep In Mothers:

Bright light therapy may improve a mother’s nocturnal sleep, decrease daytime sleepiness and be beneficial to her well-being, according to a research abstract that will be presented on June 9 at SLEEP 2008, the 22nd Annual Meeting of the Associated Professional Sleep Societies (APSS).

Extra Sleep Improves Athletic Performance:

Getting extra sleep over an extended period of time improves athletic performance, mood and alertness, according to a research abstract that will be presented on June 9 at the SLEEP 2008 22nd Annual Meeting of the Associated Professional Sleep Societies (APSS) in Baltimore, Md.

Fat Intake Negatively Influences The Sleep Pattern In Healthy Adults:

Total fat intake and dinner fat intake seem to influence negatively the sleep pattern in healthy adults, according to a research abstract that will be presented on June 10 at SLEEP 2008, the 22nd Annual Meeting of the Associated Professional Sleep Societies (APSS).

Ethical Implications Of Modifying Lethal Injection Protocols:

A team of medical, ethical, and legal scholars argues in PLoS Medicine that in some US states the modification of lethal injection protocols is tantamount to experimentation upon prisoners without the prisoners’ consent and without any ethical safeguards.

Major League Baseball Teams With Greater Circadian Advantage Are More Likely To Succeed:

The magnitude of circadian advantage influences the outcome of Major League Baseball (MLB) games in that teams with greater circadian advantage are more likely to win, according to a research abstract that will be presented on June 10 at SLEEP 2008, the 22nd Annual Meeting of the Associated Professional Sleep Societies (APSS).

Sleepy Driving Highly Prevalent Among College Students:

A high prevalence of sleepy driving is reported among college students, according to a research abstract that will be presented on June 9 at SLEEP 2008, the 22nd Annual Meeting of the Associated Professional Sleep Societies (APSS).

Poor Sleep Quality And Insomnia Associated With Suicidal Symptoms Among College Students:

Poor sleep quality and insomnia are significantly associated with suicidal symptoms among college undergraduates, according to a research abstract that will be presented on June 9 at SLEEP 2008, the 22nd Annual Meeting of the Associated Professional Sleep Societies (APSS).

Decreased Total Sleep Time Associated With Increased REM Sleep During Subsequent Naps:

Decreased nightly total sleep time, even within the normal range, is associated with an increased percentage of REM sleep during subsequent naps, according to a research abstract that will be presented on June 10 at SLEEP 2008, the 22nd Annual Meeting of the Associated Professional Sleep Societies (APSS).

Insomnia Among Returning War Vets Is As Severe As Patients With Chronic Insomnia:

Insomnia together with post-deployment adjustment disorders among returning war veterans is as severe as patients suffering from chronic insomnia, according to a research abstract that will be presented on June 10 at SLEEP 2008, the 22nd Annual Meeting of the Associated Professional Sleep Societies (APSS).

Prenatal Drug Exposure Linked To Sleep Problems In Children:

In the first study across time into late childhood of the effects of prenatal drug exposure on sleep, prenatal drug exposure is associated with greater sleep problems in children. In addition, nicotine has a unique effect, and early sleep problems predict later sleep problems, according to a research abstract that will be presented on June 10 at SLEEP 2008, the 22nd Annual Meeting of the Associated Professional Sleep Societies (APSS).

Sleep Problems Linked To Obesity, Lower Quality Of Life In School-aged Children:

A research abstract that will be presented on June 10 at SLEEP 2008, the 22nd Annual Meeting of the Associated Professional Sleep Societies (APSS), finds an increased prevalence of sleep problems among school-aged children who are obese and an association between increased weight and lower quality of life.

Link Between Migranes And Sleep Disorders In Children:

Children with a migraine headache are more likely to have sleep disorders, such as obstructive sleep apnea (OSA) and lack of sleep, than children without a migraine, according to a research abstract on the effects of headaches on children’s sleep patterns that will be presented on June 10 at SLEEP 2008, the 22nd Annual Meeting of the Associated Professional Sleep Societies (APSS).

ClockQuotes

Change is no modern invention. It is as old as time and as unlikely to disappear. It has always to be counted on as of the essence of human experience.
– James Rowland Angell

New Media vs. Old Media Redux (with Survey)

Remember Chez Sapienza? The guy who was fired from CNN for having the gall to write a blog?
Well, a lot of people with brains got upset about this. And Simon Owens decided to investigate further, to see what is the general attitude about blogging among the Corporate Media control freaks. So he did a survey, and has just posted the results. Check them out.

Why Toll Access has no legs?

For the same reason snakes have no legs. Or perhaps not. It is difficult to find out.

Punishment that fits the crime

Some teens pulled a nasty prank and posted a video of it on YouTube. As a part of their sentence, the judge ordered them to make another video, with the apology and to post that on YouTube. There are several similar prank videos on YouTube so I do not know which one is this one, but the apology video is here.

On Coworking

Brian Russell interviewed for Matt Frye’s Triangle Stories. Go and listen….

Obama is brilliant!

Earlier today, here in Raleigh (and yes, he will contest North Carolina, and perhaps all 50 states!) at an “invitation-only” event (so no liveblogging from me, sorry), Obama killed at least three birds with one stone. In one sentence, at the very end, he got himself endeared to the three key groups of voters who are still suspicious of him: women/Hillary fans, Edwards fans, and people who do not like Obama’s health-care plan (which is obviously going to change now….).

New and Exciting in PLoS Biology and PLoS Medicine

A Roadmap for Migrating Neurons:

Politicians, pundits, and even your best friends occasionally do things that make you wonder how their brains are wired. The next time you have that thought, consider consulting a developmental neuroscientist: they work every day to understand the processes that wire up everyone’sbrains. It’s a mind-boggling job, because as an embryo develops, the connections within its brain ramify, becoming ever more complex. For example, consider the neural connections in the mammalian cerebellum. This distinctive structure is responsible for coordinating sensory and motor signals to produce fine motor control. This must be a complicated job–the cerebellum contains about half of the brain’s neurons.

Ethical Implications of Modifying Lethal Injection Protocols:

Lethal injection for execution has largely replaced other execution methods, in part due to the appearance of a peaceful death; however, available evidence indicates that some inmates actually suffer extreme pain. This has triggered legal challenges against lethal injection on the grounds that it violates the United States’ constitutional prohibition against cruel and unusual punishment. Some jurisdictions collect comprehensive data on executions and outcomes, and some have modified their lethal injection protocols. Recently, jurists and lethal injection advisory panels have recommended specific changes to be instituted for future executions. Such use of biomedical inquiry to evaluate, modify, and “improve” protocols resembles human experimentation and should be scrutinized against accepted norms for ethical conduct of research, particularly given the vulnerable nature of the prisoner population. Although the regulations governing prisoner research vary by jurisdiction, the ethical framework for the modification of lethal injection protocols should be made clear prior to further investigation into how to “improve the process.”

Gene Banks Pay Big Dividends to Agriculture, the Environment, and Human Welfare:

Nearly a century after the pioneering American apple tree purveyor Johnny Appleseed traveled from town to town planting nurseries in the Midwestern United States, Frans Nicholas Meijer left his Netherlands home to pursue a similar vocation as an “agricultural explorer” for the US Department of Agriculture. Over the course of his career, Meijer, who changed his name to Frank Meyer after reaching the New World, helped introduce over 2,500 foreign plants from Europe, Russia, and China, including the lemon that would bear his name. Starting with his first expedition for Asian plants in 1905, Meyer would encounter isolation, physical discomfort, disease, robbers, and revolutionaries in his quest to collect useful plants.

How Might Cocaine Interfere with Brain Development?:

Women addicted to cocaine often continue drug use through pregnancy, despite risks to the fetuses they are carrying. Multiple studies have attempted to identify the effects of cocaine and other commonly abused drugs on fetal brain development and behavior in clinical populations. The attribution of risk to specific drugs remains challenging, however, because women addicted to cocaine often use other illegal drugs as well as alcohol and tobacco. Moreover, they tend to have poor nutrition, low levels of prenatal care, and other problems that confound analysis.

My Picks From ScienceDaily

Sheep’s Sex Determined By Diet Prior To Pregnancy:

Maternal diet influences the chances of having male or female offspring. New research has demonstrated that ewes fed a diet enriched with polyunsaturated fats for one month prior to conception have a significantly higher chance of giving birth to male offspring.

Fossilized Burrows 245 Million Years Old Suggest Lizard-like Creatures In Antarctica:

For the first time paleontologists have found fossilized burrows of tetrapods — any land vertebrates with four legs or leglike appendages — in Antarctica dating from the Early Triassic epoch, about 245 million years ago.

Caribbean Monk Seal Gone Extinct From Human Causes, NOAA Confirms:

After a five year review, NOAA’s Fisheries Service has determined that the Caribbean monk seal, which has not been seen for more than 50 years, has gone extinct — the first type of seal to go extinct from human causes.

Complex Synapses Drove Brain Evolution:

One of the great scientific challenges is to understand the design principles and origins of the human brain. New research has shed light on the evolutionary origins of the brain and how it evolved into the remarkably complex structure found in humans.

Scientific Information Largely Ignored When Forming Opinions About Stem Cell Research:

When forming attitudes about embryonic stem cell research, people are influenced by a number of things. But understanding science plays a negligible role for many people.

Plastic Brain Outsmarts Experts: Training Can Increase Fluid Intelligence, Once Thought To Be Fixed At Birth:

Can human beings rev up their intelligence quotients, or are they stuck with IQs set by their genes at birth? Until recently, nature seemed to be the clear winner over nurture.

Film Content, Editing, And Directing Style Affect Brain Activity, Neuroscientists Show:

Using advanced functional imaging methods, New York University neuroscientists have found that certain motion pictures can exert considerable control over brain activity. Moreover, the impact of films varies according to movie content, editing, and directing style. Because the study, which appears in Projections: The Journal for Movies and Mind, offers a quantitative neuroscientific assessment of the impact of different styles of filmmaking on viewers’ brains, it may serve as a valuable method for the film industry to better assess its products and offer a new method for exploring how the brain works.

Maternal Depression, Breastfeeding And A Lower Socioeconomic Status Can Affect Infants’ Sleep:

Maternal depression during pregnancy, breastfeeding and a lower socioeconomic status are all associated with less infant sleep duration in the first six months of life, according to a research abstract that will be presented on June 9 at SLEEP 2008, the 22nd Annual Meeting of the Associated Professional Sleep Societies (APSS).

Scientists Decipher The Neurological Basis Of Timely Movement:

Contrary to what one might imagine, the way in which each of us interacts with the world is not a simple matter of seeing (or touching, or smelling) and then reacting. Even the best baseball hitter eyeing a fastball does not swing at what he sees. The neurons and neural connections that make up our sensory systems are far too slow for this to work. “Everything we sense is a little bit in the past,” says Richard A. Andersen of the California Institute of Technology, who has now uncovered the trick the brain uses to get around this puzzling problem.

Persistent Man-made Chemical Pollutants Found In Deep-sea Octopods And Squids:

New evidence that chemical contaminants are finding their way into the deep-sea food web has been found in deep-sea squids and octopods, including the strange-looking “vampire squid”. These species are food for deep-diving toothed whales and other predators.

The Cormorant: ‘Black Plague’ Or An Example Of Successful Species Conservation?:

Europe requires a common management strategy for cormorants in order to reconcile nature conservation and fishing interests. An effective regulation of cormorant populations can only work at the European level, researchers from the Helmholtz Centre for Environmental Research (UFZ) write in the scientific journal Environmental Conservation. Furthermore, they suggest a five-step action plan, which would start with a consensus on the real numbers of animals and end in an international management plan.

New Catfish Species Named For Museum Mail Supervisor:

He’s not well known like President Bush and musician Neil Young, but Philadelphian Frank Gallagher now has something in common with them: He has a new species named after him.

Climate Change Hastens Extinction In Madagascar’s Reptiles And Amphibians:

New research from the American Museum of Natural History provides the first detailed study showing that global warming forces species to move up tropical mountains as their habitats shift upward. Christopher Raxworthy, Associate Curator in the Department of Herpetology, predicts that at least three species of amphibians and reptiles found in Madagascar’s mountainous north could go extinct between 2050 and 2100 because of habitat loss associated with rising global temperatures. These species, currently moving upslope to compensate for habitat loss at lower and warmer altitudes, will eventually have no place to move to.

Toxic Algal Blooms May Cause Seizures In California Sea Lions:

Scientists, reporting in the current issue of the online journal Marine Drugs, state that an increase of epileptic seizures and behavioral abnormalities in California sea lions can result from low-dose exposure to domoic acid as a fetus. The findings follow an analysis earlier this year led by Frances Gulland of the California Marine Mammal Center that showed this brain disturbance to be a newly recognized chronic disease.

Today’s carnivals

Gene Genie #33 is up on Neurophilosophy
Encephalon #47 is up on Channel N
Carnival of the green #131 is up on Blogfish

ClockQuotes

The perils of ambulatory reading. If you have never said Excuse me to a parking meter or bashed your shins on a fireplug, you are probably wasting too much valuable reading time.
– Sherri Chasin Calvo

Kung Fu Panda

After reading this thread I was really nervous about going to see Kung Fu Panda, but my daughter insisted (ever since the first posters and trailers came out months ago), so we went last night. And…..
…the movie is really not what Melissa expected. If anything, it is the opposite – in one moment it uses a fat joke to make you laugh (which sometimes you manage to supress, sometimes not), but then in the next moment it shames you for laughing at the previous joke. What the movie parodies the best are old martial arts movie, from Bruce Lee movies, through Karate Kid, to Crouching tiger…, and even Tampopo! As I have seen loads of such movies in my life, I could recognize the way they poked fun at the genre cliches, but some others in the audience may have missed those references.
The movie is packed with action and humor at all times and was really fun to watch. Poe, the panda, is made fun more for his lack of ability coming from lack of training, than for his shape ands size. He is chosen to save the valley from a particularly nasty character not because of his prowess, but because an old, wise turtle said so (which is making fun of the Chinese movie cliches). There is no time for years of classical training, and he is really not suited for it anyway. But he is willing – he has been dreaming all his life of becoming a kung-fu master yet facing the reality that his upbringing could never make that dream come true. And his master has to do something – and quickly!
So, the master thought and realized that, just like with his other students, he needs NOT to train Poe in kung-fu but to adopt kung-fu to fit Poe. He realized that the kid is easily distracted and that he fares worst when he thinks too much about fighting (paralysis by analysis), but can fight just fine when motivated by something else. Poe, a son of a soup chef, is motivated by food, and the ‘catch the dumpling’ scene in the middle of the movie is absolutely awesome as, over a span of several minutes, Poe transforms from a clumsy fat panda into a nimble, fast, fighting machine. Sorta like Taiji Kase (I got my brown belt at a Kase seminar and my black at a Shirai seminar, so I have seen them both in action: Kase is amazingly strong and fast even after a huge meal and lots of beer!). His natural body shape becomes a part of his fighting style, which he uses to defeat the enemy at the end. And remains humble. And loses his self-consciousness about his body size in the process.
So, the movie uses fat jokes in order to shame us for laughing. It is a fat-acceptance movie throughout, not just at the end. Two of the five awesome fighters are women, one of which, the tigress, is the best of them all, and two of them chastize the others whenever they mention something about Poe’s weight. My daugher loved it and wants to see it again.

ClockQuotes

The experience of democracy is like the experience of life itself – always changing, infinite in its variety, sometimes turbulent and all the more valuable for having been tested by adversity.
– James Earl Carter, Jr

Today’s carnivals

June edition of Scientiae is up on Thus Spake Zuska
The 21st edition of The Boneyard is up on The Flying Trilobite

Ponto Proudneck of Tuckborough

That’s me. My Hobbit name. Generated with the The Hobbit Name Generator, provided by Graham Steel in the comments of this poetically frustulous post. And my elvish name is Inglor Tinuviel.

ClockQuotes

Sometimes I find that in my happy moments I could not believe that I had ever been miserable.
– Joanna Field

My Picks From ScienceDaily

Keeping Beer Fresher:

Scientists in Venezuela are reporting an advance in the centuries-old effort to preserve the fresh taste that beer drinkers value more than any other characteristic of that popular beverage.

Futuristic Linkage Of Animals And Electronics:

The same Global Positioning System (GPS) technology used to track vehicles is now being used to track cows.

Brown Argus Butterfly Sees Positive Effects Of Climate Change:

Global warming is generally thought to have a negative affect on the habitats of many animals and plants. Not for the Brown Argus butterfly, however. This insect seems to be bucking the trend and expanding its numbers quicker and more effectively, according to new research.

How To Construct A ‘Firefly’ Worm: Measuring Metabolism Of Entire Organism In Real Time:

For the first time, research describing a new modified luminescent worm allows scientists to measure – in real time – the metabolism of an entire living organism. The key behind this capacity relies in the fact that the luminescence is produced using the animal’s available energy, which reflects its metabolism that, as such, can be extrapolated from measuring the emitted light.

Fish 380 Million Years Old Found With Unborn Embryo:

In 2005, Museum Victoria’s expedition to the Gogo fossil sites in north Western Australia, led by Dr John Long, made a swag of spectacular fossil discoveries, including that of a complete fish, Gogonasus, showing unexpected features similar to early land animals.

Admiring Celebrities Can Help Improve Self-esteem:

A new study appearing in Personal Relationships shows how “connections” to celebrities, i.e. parasocial relationships, can allow people with low-self esteem to view themselves more positively.

Teenagers Attending College Less Likely To Engage In Risky Sexual Behavior:

Adolescents attending college six months after completing high school are significantly less likely to engage in risky sexual behavior than those who do not go to college, according to the first study to directly compare the two groups.

Facebook update

As it grew too big, and the functionality was lacking, the PLoS Facebook group has been closed and moved to a PLoS Facebook page instead. Join in.

This is why I telecommute….

….so I never get to the point at which I am driven to behave like this:

One day soon, people will look back at videos like this one and wonder in astonishment that people in the past had to go to a place to work! That there used to be such a thing as the office! And that people wasted time, energy and polluting materials in order to get there! And that there was such a thing as a mental division between ‘Work’ and ‘Life’! And that people traveled short distances every day instead of long trips every now and then, just to see the world… Increased mobility (in physical and cyber space) allows us to control our movement better – and decrease it by eliminating unnecessary driving around.

History of science carnival in the making

But what should it be called? In the wake of the great success of the Classic Papers Chellenge, Skulls In The Stars will turn it into a regular carnival. And this is where you come in – suggest a good catchy name for the carnival in the comments of this post (these names are taken, but can give you ideas….).

A really, truly bad article about Open Access

If you are looking for a short, easy-to-understand statement that gets absolutely everything about Open Access completely wrong, you can’t do much better than this: Hidden cost of open access in Times Higher Education. Luckily, the commenters set it straight. So does Peter Suber, who also adds an important point:

The success of the OA movement means that every day newcomers hear about it for the first time. One of the burdens of that success is that many newcomers pick up and spread old myths about it. If Altbach isn’t new to OA issues, then he’s inexcusably careless with them, and his claim about peer review is one of the classic myths that newcomers have been picking up and spreading for years.

Evolutionary Medicine

Bjoern Brembs alerts me to a cool new paper (OA so you can read the whole thing) – The great opportunity: Evolutionary applications to medicine and public health by Randolph M. Nesse and Stephen C. Stearns:

Evolutionary biology is an essential basic science for medicine, but few doctors and medical researchers are familiar with its most relevant principles. Most medical schools have geneticists who understand evolution, but few have even one evolutionary biologist to suggest other possible applications. The canyon between evolutionary biology and medicine is wide. The question is whether they offer each other enough to make bridge building worthwhile. What benefits could be expected if evolution were brought fully to bear on the problems of medicine? How would studying medical problems advance evolutionary research? Do doctors need to learn evolution, or is it valuable mainly for researchers? What practical steps will promote the application of evolutionary biology in the areas of medicine where it offers the most? To address these questions, we review current and potential applications of evolutionary biology to medicine and public health. Some evolutionary technologies, such as population genetics, serial transfer production of live vaccines, and phylogenetic analysis, have been widely applied. Other areas, such as infectious disease and aging research, illustrate the dramatic recent progress made possible by evolutionary insights. In still other areas, such as epidemiology, psychiatry, and understanding the regulation of bodily defenses, applying evolutionary principles remains an open opportunity. In addition to the utility of specific applications, an evolutionary perspective fundamentally challenges the prevalent but fundamentally incorrect metaphor of the body as a machine designed by an engineer. Bodies are vulnerable to disease – and remarkably resilient – precisely because they are not machines built from a plan. They are, instead, bundles of compromises shaped by natural selection in small increments to maximize reproduction, not health. Understanding the body as a product of natural selection, not design, offers new research questions and a framework for making medical education more coherent. We conclude with recommendations for actions that would better connect evolutionary biology and medicine in ways that will benefit public health. It is our hope that faculty and students will send this article to their undergraduate and medical school Deans, and that this will initiate discussions about the gap, the great opportunity, and action plans to bring the full power of evolutionary biology to bear on human health problems.

Today’s carnivals

Linnaeus’ Legacy #7 is up on When Pigs Fly Returns
Four Stone Hearth #42 is up on Neuroanthropology
The 88th Skeptic’s Circle is up on Jyunri Kankei
Carnival of Space #57 is up on Out of the Cradle
Friday Ark #194 is up on Modulator

Primaries are over….

M. LeBlanc: Playing Cards
Melissa McEwan: For the Record
Echidne: Why Vote For Obama? and Well Worth Reading
Neil Sinhababu: TEN GOOD REASONS FOR AN OBAMA/EDWARDS TICKET….
Amanda Marcotte: Feminists: Not really stupid
Pam Spaulding: Mike Signorile tries to bore into the ‘if not Hillary, I’m voting McCain’ logic
I understand. I followed and supported Edwards for 10 years (his 1998 Senate race, 2004 and 2008 Presidential races). I had plenty of time to come to terms with things I did not like, e.g., votes I disagreed with, etc. I also spent a lot of time and effort on oppo research – I know better than most what Obama or Clinton did or said that I did not like. And it takes time to shift – when Edwards bowed out of the race, many Edwardsians suggested he go all the way to the convention and be a “kingmaker” and stuff like that. Weeks later, we all supported either Obama or Clinton (without the emotional zeal of their early supporters) and voted appropriately in the primaries. After a few more weeks, Hillary’s supporters will come around as well. Obama is our nominee, and doing anything to help usher in the third Bush term is foolish, and Clinton supporters know it, or will understand it by November once they take a better look at the monster running on the GOP ticket.

ClockQuotes

Bureaucracy defends the status quo long past the time when the quo has lost its status.
– Laurence J. Peter

Blogrolling for today

Sciencegeekgirl


The Plummet Onions


Scholarly Communication News@BC


Twisted Physics


Freeresearcher.net

Radiation-eating fungi beat vacuum-cleaner dinos and Steve’s crocs

Recent discussions about potential use of downloads in place of other bibliometric measures (including Impact Factor) made us think. So, we took a look at PLoS ONE stats to see which papers are the most visited to date. The results are here – the most visited ONE paper is Ionizing Radiation Changes the Electronic Properties of Melanin and Enhances the Growth of Melanized Fungi, which got quite a lot of coverage in the media and on blogs (including BoingBoing, Slashdot, Rhosgobel, to point to just a few) when it first came out a year ago.
In second place is Paul Sereno’s Structural Extremes in a Cretaceous Dinosaur (you can get the taste for the media and blog coverage at the bottom of this post), as you may have expected.
The Top 5 also include: Resistance Exercise Reverses Aging in Human Skeletal Muscle by Melov et al., Intense Sweetness Surpasses Cocaine Reward by Lenoir et al., and the late Steve Irwin’s last paper, Satellite Tracking Reveals Long Distance Coastal Travel and Homing by Translocated Estuarine Crocodiles, Crocodylus porosus.
This was not downloads but traffic, but still, it is an interesting result to ponder….Perhaps those papers that have cool pictures can skew the numbers!

My Picks From ScienceDaily

Spider Silk Can Be Stretchy Like Springs Or Like Rubber:

Spider silks are incredibly stretchy, but are they stretchy like elastic or springs? The answer lies in their amino acid content. Spider silks are made from proteins, and biologists have just discovered that the secret lies in the silk protein’s amino acid content. Spider silks with high proline contents behave like elastic rubber bands, while spider silks with low proline content behave like stretchy springs.

Scientists Uncover How Plant Roots Respond To Physical Forces Such As Gravity, Pressure, Or Touch:

Researchers at Washington University in St. Louis are the first to identify two proteins responsible for mechanosensitive ion channel activities in plant roots. Scientists have long known that plant cells respond to physical forces. Until now, however, the proteins controlling the ion channel response remained a mystery.

Human Viruses Appear To Be Making Wild Chimpanzees Sick:

After studying chimpanzees in the wilds of Tanzania’s Mahale Mountains National Park for the past year as part of a National Science Foundation (NSF) grant, Virginia Tech researcher Dr. Taranjit Kaur and her team have produced powerful scientific evidence that chimpanzees are becoming sick from viral infectious diseases they have likely contracted from humans.

Humans Have Ten Times More Bacteria Than Human Cells: How Do Microbial Communities Affect Human Health?:

The number of bacteria living within the body of the average healthy adult human are estimated to outnumber human cells 10 to 1. Changes in these microbial communities may be responsible for digestive disorders, skin diseases, gum disease and even obesity. Despite their vital imporance in human health and disease, these communities residing within us remain largely unstudied and a concerted research effort needs to be made to better understand them, say researchers June 3 at the 108th General Meeting of the American Society for Microbiology in Boston.

Unravelling The Mystery Of The Kitty Litter Parasite In Marine Mammals:

Researchers at California Polytechnic State University have discovered what may be a clue to the mystery of why marine mammals around the world are succumbing to a parasite that is typically only associated with cats. The key may just be the lowly anchovy, according to research presented today at the 108th General Meeting of the American Society for Microbiology in Boston.

New Way To Think About Earth’s First Cells:

A team of researchers at Harvard University have modeled in the laboratory a primitive cell, or protocell, that is capable of building, copying and containing DNA.

Estrogen Applied To Human Penis Could Block Spread Of HIV, Study Suggests:

In a world first, a University of Melbourne study has shown that topical oestrogen could help prevent HIV infection by blocking entry of the virus into the human penis.

Today’s carnivals

The 174th edition of The Carnival of Education is up on The Education Wonks
Carnival of the Liberals #66 is up on The Otherwhirled

ClockQuotes

[One sometimes feels] a guest of one’s time and not a member of its household.
– George Frost Kennan

My Picks From ScienceDaily

This is funny – I start reading interesting stuff, really stuff that I find catchy regardless of where I work….and it’s all from PLoS ONE! We rock! The journal that some people regard as a repository for “boring, incremental stuff” is publishing all the most exciting papers around….just see these:
Transgenic Plants Don’t Hurt Beneficial Bugs, Entomologists Find:

Genetically modified (GM) plants that use Bt (Bacillus thuringiensis), a common soil bacterium, to kill pests won’t harm the pests’ natural enemies, according to new research by Cornell entomologists.

Honeybee Dance Breaks Down Cultural Barrier:

Asian and European honeybees can learn to understand one another’s dance languages despite having evolved different forms of communication, an international research team has shown for the first time.

Memory In Honeybees: What The Right And Left Antenna Tell The Left And Right Brain:

It is widely known that the right and left hemispheres of the brain perform different tasks. Lesions to the left hemisphere typically bring impairments in language production and comprehension, while lesions to the right hemisphere give rise to deficits in the visual-spatial perception, such as the inability to recognize familiar faces.

New Zealand Bird Outwits Alien Predators:

New research led by Dr Melanie Massaro and Dr Jim Briskie at the University of Canterbury, which found that the New Zealand bellbird is capable of changing its nesting behaviour to protect itself from predators, could be good news for island birds around the world at risk of extinction.

Parasitoid Turns Its Host Into A Bodyguard:

There are many examples of parasites that induce spectacular changes in the behaviour of their host. Flukes, for example, are thought to induce ants, their intermediate host, to move up onto blades of grass during the night and early morning. There, they firmly attach themselves to the substrate with their mandibles, and are thus consumed by grazing sheep, the fluke’s final host. In contrast, uninfected ants return to their nests during the night and the cooler parts of the day. As another example, terrestrial insects parasitized by hairworms commit suicide by jumping into water, where the adult worms reproduce.

Mammalian Neurogenesis Breaks Into The Most Static Brain Region:

Fifteen years ago, the discovery of adult neurogenesis (the production of new neurons) in the highly static, non-renewable mammalian brain was a breakthrough in neuroscience. Most emphasis was put on the possibility to figure out new strategies for brain repair against the threath of neurodegenerative diseases. Yet, unlike lower vetebrates, which are characterized by widespread postnatal neurogenesis, neurogenic sites in mammals are highly restricted within two very small regions. Hence, the fact that protracted neurogenesis in mammals is an exception rather than the rule slowes down hopes for generalized brain repair.

Substance In Red Wine, Resveratrol, Found To Keep Hearts Young:

How, scientists wonder, do the French get away with a clean bill of heart health despite a diet loaded with saturated fats? The answer to the so-called “French paradox” may be found in red wine. More specifically, it may reside in small doses of resveratrol, a natural constituent of grapes, pomegranates, red wine and other foods, according to a new study by an international team of researchers.

ClockQuotes

Life is not a matter of holding good cards, but sometimes, playing a poor hand well.
– Jack London

New and Exciting in PLoS ONE

There are 56 new articles published in PLoS ONE a few minutes ago. Please comment, rate and send trackbacks. Here are some of my personal favourites of the week:
East Learns from West: Asiatic Honeybees Can Understand Dance Language of European Honeybees:

The honeybee waggle dance, through which foragers advertise the existence and location of a food source to their hive mates, is acknowledged as the only known form of symbolic communication in an invertebrate. However, the suggestion, that different species of honeybee might possess distinct ‘dialects’ of the waggle dance, remains controversial. Furthermore, it remains unclear whether different species of honeybee can learn from and communicate with each other. This study reports experiments using a mixed-species colony that is composed of the Asiatic bee Apis cerana cerana (Acc), and the European bee Apis mellifera ligustica (Aml). Using video recordings made at an observation hive, we first confirm that Acc and Aml have significantly different dance dialects, even when made to forage in identical environments. When reared in the same colony, these two species are able to communicate with each other: Acc foragers could decode the dances of Aml to successfully locate an indicated food source. We believe that this is the first report of successful symbolic communication between two honeybee species; our study hints at the possibility of social learning between the two honeybee species, and at the existence of a learning component in the honeybee dance language.

From Antenna to Antenna: Lateral Shift of Olfactory Memory Recall by Honeybees:

Honeybees, Apis mellifera, readily learn to associate odours with sugar rewards and we show here that recall of the olfactory memory, as demonstrated by the bee extending its proboscis when presented with the trained odour, involves first the right and then the left antenna. At 1-2 hour after training using both antennae, recall is possible mainly when the bee uses its right antenna but by 6 hours after training a lateral shift has occurred and the memory can now be recalled mainly when the left antenna is in use. Long-term memory one day after training is also accessed mainly via the left antenna. This time-dependent shift from right to left antenna is also seen as side biases in responding to odour presented to the bee’s left or right side. Hence, not only are the cellular events of memory formation similar in bees and vertebrate species but also the lateralized networks involved may be similar. These findings therefore seem to call for remarkable parallel evolution and suggest that the proper functioning of memory formation in a bilateral animal, either vertebrate or invertebrate, requires lateralization of processing.

Introduced Mammalian Predators Induce Behavioural Changes in Parental Care in an Endemic New Zealand Bird:

The introduction of predatory mammals to oceanic islands has led to the extinction of many endemic birds. Although introduced predators should favour changes that reduce predation risk in surviving bird species, the ability of island birds to respond to such novel changes remains unstudied. We tested whether novel predation risk imposed by introduced mammalian predators has altered the parental behaviour of the endemic New Zealand bellbird (Anthornis melanura). We examined parental behaviour of bellbirds at three woodland sites in New Zealand that differed in predation risk: 1) a mainland site with exotic predators present (high predation risk), 2) a mainland site with exotic predators experimentally removed (low risk recently) and, 3) an off-shore island where exotic predators were never introduced (low risk always). We also compared parental behaviour of bellbirds with two closely related Tasmanian honeyeaters (Phylidonyris spp.) that evolved with native nest predators (high risk always). Increased nest predation risk has been postulated to favour reduced parental activity, and we tested whether island bellbirds responded to variation in predation risk. We found that females spent more time on the nest per incubating bout with increased risk of predation, a strategy that minimised activity at the nest during incubation. Parental activity during the nestling period, measured as number of feeding visits/hr, also decreased with increasing nest predation risk across sites, and was lowest among the honeyeaters in Tasmania that evolved with native predators. These results demonstrate that some island birds are able to respond to increased risk of predation by novel predators in ways that appear adaptive. We suggest that conservation efforts may be more effective if they take advantage of the ability of island birds to respond to novel predators, especially when the elimination of exotic predators is not possible.

Parasitoid Increases Survival of Its Pupae by Inducing Hosts to Fight Predators:

Many true parasites and parasitoids modify the behaviour of their host, and these changes are thought to be to the benefit of the parasites. However, field tests of this hypothesis are scarce, and it is often unclear whether the host or the parasite profits from the behavioural changes, or even if parasitism is a cause or consequence of the behaviour. We show that braconid parasitoids (Glyptapanteles sp.) induce their caterpillar host (Thyrinteina leucocerae) to behave as a bodyguard of the parasitoid pupae. After parasitoid larvae exit from the host to pupate, the host stops feeding, remains close to the pupae, knocks off predators with violent head-swings, and dies before reaching adulthood. Unparasitized caterpillars do not show these behaviours. In the field, the presence of bodyguard hosts resulted in a two-fold reduction in mortality of parasitoid pupae. Hence, the behaviour appears to be parasitoid-induced and confers benefits exclusively to the parasitoid.

Visiting Sick People: Is It Really Detrimental to Our Health?:

Intuitively, keeping ones distance from a source of infection would appear to be the best way to limit the occurrence of disease. However, this overlooks the importance of repeated infections in maintaining efficient immune defenses. When acquired immunity has partly waned, re-exposure to the pathogenic agent may lead to mild disease that boosts the immune system. This prevents the total loss of immunity that would lead to classical disease in cases of re-infection. Here, using a mathematical model, we show that avoiding the pathogenic agent is detrimental in some situations, e.g. for pathogens that are highly transmissible, are not excessively lethal and that induce rapidly waning immunity. Reducing exposure to pathogenic agents is among the objectives of most, if not all, public health measures. A better understanding of the factors influencing the severity of a disease is required before applying measures that reduce the circulation of pathogenic agents.

Continue reading

Carnivals

While the conference site is down and before the new one is built, I need, for myself, a list of blog carnivals I follow, so here I am putting it here for my own reference (let me know if I am missing a delightful and useful carnival – if you manage one of them, make sure I am on your mailing list so I can get updates as the new editions of carnivals get posted):
Tangled Bank
Grand Rounds
Carnival of the Green
Carnival of the Blue
Scientiae
Linnaeus’ Legacy
Circus of the Spineless
I And The Bird
Festival of the Trees
Berry Go Round
Encephalon
Molecular and Cell Biology Carnival
Oekologie
Change of Shift
Bio::Blogs
Philosophia Naturalis
Four Stone Hearth
The Accretionary Wedge
Skeptics’ Circle
Boneyard
Gene Genie
Mendel’s Garden
Cancer research blog carnival
International Carnival of Pozitivities
Carnival of Space
Carnival of Mathematics
Friday Ark
Cabinet of Curiosities
History Carnival
Philosophy Carnival
Carnival of Education
Carnival of the Liberals
Carnival of the Godless

Just like XO laptop, but made of canvas and leather

Have you ever heard of TOMS Shoes? Apparently, this has been going on for two years now. Blake Mycoskie is making these shoes and, whenever you buy a pair for yourself, he sends another pair to a poor child in the developing world.

Now that the primaries are over….

…the Veepstakes have begun. The first poll that includes potential Veeps for Obama and McCain is now out.

Today’s carnivals

Circus of the Spineless #33 is up on Seeds Aside
Grand Rounds Volume 4 Number 37 is up on The Happy Hospitalist
The 127th Carnival of Homeschooling is up on Tami’s Blog.

My Picks From ScienceDaily

Evolution Of An Imprinted Domain In Mammals:

The normal human genome contains 46 chromosomes: 23 from the mother and 23 from the father. Thus, you have two copies of every gene (excluding some irregularity in the pair of sex chromosomes). In general, which parent contributes a chromosome has no effect on the expression of the genes found on it. Exceptions to this rule are caused by “genomic imprinting”–modification of DNA, which means that gene expression is influenced by which parent the gene came from. A new paper investigates the evolution of genomic imprinting in a specific region of the mammalian genome. The work, by Anne Ferguson-Smith and colleagues in the UK and Australia, shows that different regions became imprinted at different times during mammalian evolution.

Sad Children Out-perform Happy Children In Attention-to-detail Tasks:

Psychologists at the University of Virginia and the University of Plymouth (United Kingdom) have conducted experimental research that contrasts with the belief that happy children are the best learners. The findings show that where attention to detail is required, happy children may be at a disadvantage.

Bilateral Cochlear Implants: A Case When Two Are Definitely Superior To One:

A study of cochlear implant patients seen by Indiana University School of Medicine physicians is the first research to show evidence that cochlear implants in both ears significantly improves quality of life in patients with profound hearing loss and that the cost of the second implant is offset by its benefits.

Bikini-clad Women Make Men Impatient:

Images of sexy women tend to whet men’s sexual appetite. But stimulating new research in the Journal of Consumer Research says there’s more than meets the eye. A recent study shows that men who watched sexy videos or handled lingerie sought immediate gratification–even when they were making decisions about money, soda, and candy.

Strong Evidence For A Genetic Marker For Nearsightedness:

Research by Gu Zhu, M.D., and colleagues supports the theory that the refractive errors known as nearsightedness and farsightedness are primarily inherited. The group also identified the probable location—on the long arm of chromosome 5—of genes that help determine axial length, a key factor in these refractive errors. Axial length is a specific measurement from the front to back of the eye; this distance is longer than normal when a person is nearsighted and shorter than normal in a farsighted person.

Reforestation Using Exotic Plants Can Disturb Fertility Of Tropical Soils:

In many regions of the world, the impact of human activity on the environment intensified considerably over the past century. The high world population growth rate and the expansion of areas given over to crop production associated with climatic changes (longer periods of drought, irregular rainfall patterns) induced by global warming, have contributed to the acceleration of desertification.

ClockQuotes

Perfection is a waste of time.
– Kim De Coite

Whither recess?

Whatever happened to recess? I can’t imagine a school day without one! This is a crime.

Search for PPT slideshows by keyword

Go to http://www.slideworld.org, type in a keyword, and it will do a search of slideshows that contain that word. I typed “circadian” and found a lot….
Hat-tip: Ana

Science reporting basically OK?

The media monitor:

“Timothy Caulfield has spent years listening to scientists complain that the media does a poor job of explaining science. As research director of the Health Law Institute at the University of Alberta, he has heard this so often, he says, that he started to believe it too. Finally, he decided to find out for himself.
Caulfield pored over the print media’s coverage of genetic discoveries from around the English-speaking world and compiled a list of 627 newspaper articles reporting on 111 different scientific journal articles. Together with a team of coders, all of whom had scientific backgrounds, he compared the newspaper articles with the original journal studies for signs of technical errors or exaggerated claims of the research findings.
Contrary to perceived opinions, he found that only 11% of the media stories could be categorized as inaccurate or exaggerated ( Can Med Assoc J, 170:1399-407, 2004). “I was genuinely surprised that the media does a fairly good job of reporting genetic discoveries,” says Caulfield. His results not only astonished him, they contradicted him: Years earlier, he had published an article in a law journal about how the inaccurate reporting of genetic research, a phenomenon he calls “genohype,” was hurting the public’s understanding of science. “You can tell I’m a law professor and not a scientist,” he says, “because I wrote a long essay about genohype and only later went to do the study.”

Read the rest. What do you think? Has anyone read the actual paper and the nitty-gritty details of methodology and results? As this is certainly counter-intuitive.
Perhaps the media reports are basically correct about any single new paper they cover, but, where they miss the boat, is in placing the new papers in a broader context, in history, perhaps in a way that reinforces some old incorrect dogmas?

Have you….

….registered for ConvergeSouth yet?
ConvergSouth.png

Blogrolling for today

Social Psychology Daily


Clashing Culture


Jessica Snyder Sachs, Science Writer


En Tequila Es Verdad


Thoughts from gut bacteria


Carnival of the Elitist Bastards

Congratulations!

Jarred aka The Urochordate is a PhD as of today.

Today’s carnivals

Festival of the Trees #24 is up on Wrenaissance Reflections
Carnival of the Green #130 is up on Green Ladywell

LOL PLoS

First LOL PLoS images are now on Flickr and Facebook. If you use the correct tag in Flickr, yours will be added to the set. Please link to the original paper when you do this.