A Fundie Dog

This guy has some deep unresolved issues wiht sexuality. Overheated or overexcited? The link may or may not be Not Safe For Work, but it is most definitely Not Safe With Breakfast. Don’t complain I didn’t warn you!

Rock Around The Clock

Carl Feagans made this for my blog:
vrg45.jpg
Make your own at the Vinyl Record Generator.

More on cannibalism in mantises

If you are interested in the pros and cons of cannibalism in praying mantises, you should check out the latest Carl’s post and article on the topic.

The Essence

“Once you have the testes, you really don’t need the rest of the male… I feel really bad about that… it’s been my protocol to euthanize the males and take their testes.”
…spoken by Jenna’s Dev-Bio prof.

Obligatory Readings of the Day – Authoritarians III

Sterotypes, Sellouts, and Winning the Meme Wars by Sara Robinson
The Beltway Freemen by David Neiwert
Dr. Bob Has The Map by Sara Robinson

Rhetorical Strategies of the Right Wing

They are certainly familiar to anyone who has ever had a Creationist troll, a global-warming denialist troll, AIDS-HIV connection denialist troll, AR troll, DDT-is-banned troll, etc….
(Hat-tip: Bitch PhD)

Psychology of an Airplane Crash

This article looks into the possible causes of the recent crash in Lexington.

Neurons on a Ferris Wheel

Synapse #6 is up on The Mouse Trap.

More on Dolphin Intelligence

Chris Chatham of Developing Intelligence blog wrote an excellent summary of the controversy over dolphin intelligence and adds his own thoughts on the matter, with which I agree:

In conclusion, there are countless reasons to doubt that dolphins are “dumber than goldfish,” or indeed that popular musings about dolphin intelligence have been inaccurate. Of course, as Cognitive Daily points out, it is clear that they don’t have human-level intelligence – whatever that may mean. On the other hand, Manger has developed a new theory about the evolution of the dolphin brain; unfortunately, any extrapolation from neuroanatomy to cognition is still highly theoretical, particularly in the case of dolphins, whose brains are so drastically different from our own. Therefore, given the state of neuroscience, judgments of dolphin intellectual powers must more heavily weigh behavioral work (however flawed) than arguments from evolutionary data and cellular neuroscience such as Manger’s.

Read the whole thing.

Long Tail of your blog?

Lance, Matt and Tom write on MSM misunderstaning of blogs, and on old posts that keep on giving. What are your old posts that keep getting links and comments months and years after they disappeared into the depths of archives? For me it is definitely this one.

Philosophers are back in school

Philosopher’s Carnival #35 is up on Philosopher’s Playground.

Good science-related causes

If you need ideas how to help various science-related causes, Nick has collected a lot of information you can use.

More about SciBlings

Learn more about Seed’s ScienceBloggers in the latest part of the periodic system series.

Social cohesion through consensus about hierarchy

Power Emerges From Consensus In Monkey Social Networks:

Research on communication typically focuses on how individuals use signals to influence the behavior of receivers, thus primarily focusing on pairs of individuals. However, the role communication plays in the emergence of social structures is rarely studied.
In a new paper from The American Naturalist, Santa Fe Institute researchers Jessica Flack and David Krakauer study how power structures arise from a status communication network in a monkey society. Power structure is important because it can influence the complexity of interactions among group members.
“When building a society, it is of utemost importance that signals be informative and any sources of ambiguity minimized,” says Krakauer. “This requirement is reflected in the structure and function of communication networks. A goal of this research has been to study communication at a group level rather than the more traditional communication we associate with pairs.”
Using information theory, the researchers show that power emerges through consensus. There is a high degree of consensus among group members that an individual is powerful if that individual has received multiple subordination signals from many individuals — in the case of pigtailed macaque monkeys, a silent bared-teeth display. On the other hand, there is little consensus if signals come from just a few individuals.
“Consensus about power is an important organizing principle in societies in which conflicts are complicated, often involving many group members at once,” explains Krakauer. “In such cases, only individuals widely perceived as powerful will be able to terminate or reduce the severity of these conflicts. Power structure is critical to conflict management, which is in turn critical to social cohesion.”

I hope there are snakes and crocs in heaven

Steve Irwin, the Crocodile Hunter, died yesterday after a freak accident while filming a documentary. He was impaled by a stingray through the chest. RIP.

Genetics carnival

Mendel’s Garden #5 is up on Evolgen.

Dr.Love-of-Strange, or How I Learned To Love The Malaria…

Dr.Love-of-Strange, or How I Learned To Love The Malaria...From November 28, 2005, a post about teaching…

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Circadian Clocks in Microorganisms

Circadian Clocks in MicroorganismsThe first in a series of posts on circadian clocks in microorganisms (from February 23, 2006)…

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100,000!

Wow! It’s been less than three months since my move to Seed ScienceBlogs and my Sitemeter already hit 100,000.
The round-number visitor came from Oslo, Norway, a Firefox user, from Stumbleupon to see Did A Virus Make You Smart?, made three pageviews and remained 4 minutes and 13 seconds total on the last two pages.
In comparison, it took almost 16 months for Science And Politics to reach 100,000 and it has still not hit 200,000 after more than two years (the traffic there has dropped considerably but it still gets about 180 per day, mostly through Google searches).
So, I am self-congratulating myself today. Thank you all for coming and I hope to see you again tomorrow, and the day after, and the day after…

My picks from ScienceDaily

Study Finds How Organs Monitor Themselves During Early Development:

Scientists at NYU School of Medicine have unraveled the signals in a feedback loop governing ovarian development. This work has been several years in the making and is being published on August 27 in the advance online issue of the journal Nature.

This is a big, complicated and exciting study in Drosophila.
Scientists Discover Memory Molecule :

Scientists have succeeded in erasing memory in animal models. These findings may be useful for the treatment of disorders characterized by the pathological over-strengthening of synaptic connections, such as neuropathic pain, phantom limb syndrome, dystonia and post-traumatic stress.

Beware of the title! “Gene for X” and “Molecule for Y” are automatic red flags! The study is interesting, though.
NASA Study Solves Ocean Plant Mystery:

A NASA-sponsored study shows that by using a new technique, scientists can determine what limits the growth of ocean algae, or phytoplankton, and how this affects Earth’s climate.

Er, not plants…protists. Seeding the oceans with iron in order to get the dinoflaggelates to take-up CO2 is an old idea.
Evolution Of Old World Fruit Flies On Three Continents Mirrors Climate Change:

Fast-warming climate appears to be triggering genetic changes in a species of fruit fly that is native to Europe and was introduced into North and South America about 25 years ago.
—————snip—————–
In the paper, the researchers note that “the genetic shift is remarkably rapid and is detectable even for samples separated by fewer than two decades.” They add that such rapid genetic changes are likely to occur much more quickly in organisms with short life spans, such as a fruit fly, which can produce several generations in a single year.
“In the long term, this suggests that climate warming is already having genetic effects, at least on these organisms,” Huey said. “The good news is that these flies may be able to adapt, at least to some extent, to a warming climate. However, organisms with longer intervals between new generations, humans or sequoia trees for example, probably can’t adapt nearly as readily.

This is a very intreresting study. The article (I do not have the paper itself) does not seem to state if the researchers think the heat allows/triggers chromosomal inversions, or if the inversions are adaptations to higher temperature in the way some nucleotide repeats aid in temperature compensation of the fruitfly circadian clock and are thus found along a latitudinal gradient.
Crows Targeted In War Against West Nile Virus:

They’ve seen the aerial assaults; they’ve studied the weapons of mass destruction; they know the method of operation. Now, equipped with “body bags,” they’re on a “hunt-and-gather” mission to pick up the victims of the serial killer. The feathered victims. They are soldiers in a war against the West Nile virus. The battleground is Davis, zip code 95616, county of Yolo, one of the nation’s hot spots.
———-snip—————–
“Corvids serve as the primary reservoirs or incubators for the virus,” said Reisen. “Corvid surveillance is crucial to stopping the transmission of the virus.” Crows are good hosts for mosquitoes, Reisen said. “There’s an amazing amount of virus in the bloodstream of infected crows, sometimes as much as 10 billion virus particles in one millimeter of blood. They’re like a big sack of virus.”

Video Cameras Learn From Insect Eyes:

The bane of all wedding videos — that picture of the bride in front of the window where her face is so dark that you can’t see the features — may soon be a thing of the past. By mimicking how insects see, a University of Adelaide researcher can now produce digital videos in which you can see every detail. The technique solves a critical problem for surveillance cameras, where the clarity of images is everything.

Hydrogen Peroxide Sensor Could Aid Security:

A new family of molecules used to detect hydrogen peroxide and other reactive chemicals in living cells could be a useful addition to anti-terrorist arsenals, says the University of California, Berkeley, chemist who developed these substances last year.

Model Of Internal Clocks Reveals How Jet Lag Disrupts The System:

Symptoms of extreme jet lag may result from the body overshooting as it tries to adjust to particularly large leaps forward in time, suggests new research from the University of Massachusetts Amherst that models circadian rhythms in rats. To transition smoothly to a different time zone, the researchers recommend advancing in chunks of not more than four hours, thus allowing the body’s clocks to remain coordinated.

New Growth In Old Eyes:

Nerve cells in the retinas of elderly mice show an unexpected and purposeful burst of growth late in life, according to researchers at UC Davis.

Genome Info From ‘Plant Destroyers’ Could Save Trees, Beans And Chocolate:

An international team of scientists has published the first two genome sequences from a destructive group of plant pathogens called Phytophthora — a name that literally means “plant destroyer.” The more than 80 species of fungus-like Phytophthora attack a broad range of plants and together cost the agriculture, forestry and nursery industries hundreds of billions of dollars each year.

Global Text Project Aims To Create Free, Wiki-based Textbooks For Developing Nations:

Education can play a fundamental role in reducing poverty, but high-quality and up-to-date textbooks are often too expensive for most people in developing countries.
To make education more accessible, a professor in the University of Georgia Terry College of Business is spearheading an effort to produce free online textbooks using a modified version of the Wiki software that powers the Web site Wikipedia.
“The textbook model doesn’t work for developing nations,” said Rick Watson, J. Rex Fuqua Distinguished Chair for Internet Strategy and director of the UGA Center for Information Systems Leadership. “They can’t get the books down to a price that people in the developing world can afford. You essentially have to give the books away.”

Very interesting! Any thoughts (read the whole thing)?

Godless…in North Carolina?!

Carnival of the Godless #48 is up on Deep Thoughts.
Tar Heel Tavern #80 is up on 2sides2Ron.

Another thematic week

This week (Monday to Friday), at least in terms of reposting stuff from my old blogs (but hopefully also a couple of new posts), the theme will be Microorganisms.
In preparation for this, you may want to check my recent posts on biological clocks in Protista, sex life of Paramecium, a virus that made you smart and the ecology of Lyme Disease (oh, I forgot – I also hosted Animalcules #4). I hope you enjoy the series.

Friday Weird Sex Blogging – Cooling The Balls

What?….

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Higher Ed

Teaching Carnival is back from summer break and the edition #11 is up on WorkBook.

Biological Effects of the Moon

I rarely write about biological rhythms outside of circadian range (e.g., circannual, circalunar, circatidal rhythms etc.), but if you liked this post on lunar rhythms in antlions, you will probably also like this little review of lunar rhythms in today’s Nature:
Pull of the Moon:

——————-
Studies of fiddler crabs, for example, have shown that even when kept in the lab under constant light and temperature, the animals are still most active at the times that the tide would be out. A similar internal ‘circalunar’ clock is thought to tick inside many animals, running in synchrony with the Moon and tides, and working in conjunction with the animal’s 24-hour circadian clock. This is thought to help animals anticipate tide movements; a skill that might give some creatures an edge. Ecologist Martin Wikelski of Princeton University, New Jersey, has found for example, that Galapagos marine iguanas with the most accurate circalunar clock are more likely to survive tough times, presumably because they are best at reaching feeding spots first.
———————
Moonlight can also change animal behaviour. Many marine organisms move up and down in the sea depending on the level of moonlight in order to keep their light levels constant. On land, some nocturnal animals come out on a well-lit night to hunt, others stay hidden to avoid predators.
And African dung beetles, oddly, can walk in a straighter line when the Moon is out: Eric Warrant at the University at the University of Lund, Sweden, and his colleagues reported in 2003 that Scarabaeus zambesianus can detect the pattern of polarized moonlight in the night sky and use it to navigate2. This means they can roll their dung balls in a straight line on a moonlit night.
———————–

And yeah, for the anthropocentric readers, the article has a bunch on humans as well….

On This Day In History: Martha

Ectopistes_migratoriusFCN2P29CA.jpg
The last Passenger Pigeon, named Martha, died in the Cincinnati Zoo on September 1, 1914.

Computational Bio-history (sic!)

Bio::Blogs #3 is up on business|bytes|genes|molecules.
History Carnival #38 is up on Frog In A Well – Japan

Politics of Animal Protection

There has been a lot of commentary online about the Inside Higher Ed article about an UCLA primate researcher who quit his research due to being terrorised by the Animal Liberation Front (ALF), and the follow up article about the steps UCLA and other Universities are taking to ensure the safety of their faculty and staff:

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Jesus on an MRI image!

The old guy is keeping up with the times, I see, going all high-tech on us.

Aliens Found in Roswell!

And even better – they were discovered to be working illegally.
Steve says: “Extraterrestrials gotta eat, too”
Lex noticed that (if you hover your cursor over the “illegal aliens” in the text), you can find Roswell aliens on eBay!

Friday creepy-crawlies

Zygote Games has started a regular Friday feature – the Friday Parasite. Waaaaaaay cool! Which reminds me that, after a week’s break, I owe you some Friday Weird Sex Blogging…coming tonight….

Some Thoughts On Use Of Animals In Research And Teaching

Some Thoughts On Use Of Animals In Research And Teaching In light of the recent cases of researchers quitting animal research under the duress of threats and attacks by Animal Rights groups, e.g., Dr. Ringach at UCLA, this may be a good time to repost this old rant from May 23, 2005 (originally here, then reposted here on January 16, 2006):

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How products increasingly control and restrict your behaviour

Interesting economics take on the discovery that tobacco companies have been upping nicotine in cigarettes: as a parasitic lock-in business model:

A product is designed with a feature which intentionally locks customers into that product, through making it difficult to switch (for cost reasons, by ingraining habits, or by actual chemical or mental addiction). In the cases of, say, printer cartridges or razor blades, the original products (the printer or razor) require frequent refills/replacement parts. In the case of cigarette addiction, the initial use of the product (the cigarettes) modifies the behaviour of the host (the smoker) so that continued purchases of the products are required.

Other interesting links within the post.

An Erratic Rock

Go see a rock with a cool story to tell.

Trees and Animals

Festival of the Trees #3 is up on Burning Silo.
Friday Ark #102 is up on, where else, The Modulator.

The Official Seal of this blog

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First seen on Thought From Kansas
Make your own

TalkOrigins.org FAQs at my fingertips

You know that I am excited about my kids’ great start of school this year. Today when I picked them up from school, Coturnix Jr. informed me that he needed a piece of posterboard and some glue for his debate class. Ah, he is going to be so good at that, the family he is growing in… It makes him a tough kid to raise but great fun to converse with. I bet he can get PZ to join Southern Baptists!
Anyway, that was a tangent. After depositing kids at home I went to the local drugstore to get his supplies. I go there all the time, but today there was a new cashier there, a guy of about 50, I reckon. He rang my stuff and while I was paying he asked:
C(ashier): Who’s that?
M(e): Who?
C: That on you t-shirt? (I was wearing my AMNH Darwin shirt) Darwin?
M: A-ha.
C: I heard that, before his death, he recanted…
M: No. That is a lie pushed by Creationists. And even if he did, it does not matter. It’s not about the man but the idea. He got it right and it does not matter if he changed his mind fifteen times, it will still remain true.
C: Weeeellll, that is one of those things that there is no proof for or proof against…
M: No. Science is not about proofs. Math is about proofs. Science is about evidence. And since there is a mountain of evidence for evolution and none whatsoever against it, we’d be smart to stick with the best explanation we have.
Then I stood there waiting for question No.3, the one about why there are still monkeys, but, not being DaveScot, he had reached the limit of his familiarity with the topic by then so there was nothing else to say but Good Bye.
I doubt I changed his mind, but I also doubt he ever heard the answers put that way, so perhaps I planted a worm in his head. What I found interesting is the way I behaved. A few years ago, in a similar situation, I’d be stumped at first, then I would start on a long angry tirade. But, after a couple of years of reading science blogs and hundreds of threads on Pharyngula, even though I rarely bash Creationists on my blog, I internalized, almost by osmosis, all the right answers to all the classical Creationist claims.
Thus, today I was able to respond quickly, with brief, easy-to-grasp statements, without ever losing my temper and the neighborly smile, yet with an air of confidence and authority on the topic. Even if I did not change his mind, the whole encounter made me feel better about myself.

What kind of meal should we serve him when he comes?

Michael Pollan, author of “Omnivore’s Dilemma” and other good, thought-provoking books, will be on a speaking tour this Fall. Click on the link for details of your place. He will be in my neck of the woods in October:
October 11, 2006, 7 pm: Chapel Hill, NC; Morehead Planetarium at the University of North Carolina
October 10, 2006, 6 pm: Durham, NC; SEEDS Harvest Dinner
You bet I’ll be there.

Monkey see, monkey do

Chimpanzees Can Transmit Cultural Behavior To Multiple ‘Generations’:

Transferring knowledge through a chain of generations is a behavior not exclusive to humans, according to new findings by researchers at the Yerkes National Primate Research Center of Emory University and the University of St. Andrews, Scotland. For the first time, researchers have shown chimpanzees exhibit generational learning behavior similar to that in humans. Unlike previous findings that indicated chimpanzees simply conform to the social norms of the group, this study shows behavior and traditions can be passed along a chain of individual chimpanzees. These findings, based upon behavioral data gathered at the Yerkes Field Station in Lawrenceville, Ga., will publish online in the August 28 early edition of the Proceedings of the National Academy of Sciences.
—————————-snip———————————-
“The chimpanzees in this study continued using only the technique they observed rather than an alternative method,” said Horner. “This finding is particularly remarkable considering the chimpanzees in the control group were able to discover both methods through individual exploration. Clearly, observing one exclusive technique from a previous chimpanzee was sufficient for transmission of behavior along multiple cultural generations.”

“Scream” recovered

scream.jpgIt appears that the Norwegian police found the stolen Munch’s “Scream” and “Madonna”.

PIG, PhD

Richard Hoppe further dissects Jonathan Wells’ ideas about Ohio State University mentioned in Chapter 16.

My hair-stylist had to buy sheep-shearing clippers for me

Now, this is the gene that was meant to be named “hairy” instead of this one:
Hirsute-s You, Sir! Could Super Furry Animals Provide Clues For Baldness?:

The team found that cells given the genetic command to become hair follicles will send out signals to neighbouring cells to prevent them from doing likewise, so producing a specific hair pattern.
They also demonstrated that by hyperactivating the ‘hair protein’ in embryonic mice, young with considerably more fur than normal were produced.

How animals lose legs

What’s with manatees in the news lately? First intelligence, and now this:
Manatee Bones Lead To New Insight On Evolution:

“Most research professors spend their days writing grants, teaching and managing graduate students, so when Stanford’s David Kingsley, PhD, ventured from his office to his lab, pulled out a scale and started weighing 114 pairs of manatee pelvic bones, it was a sign that something was afoot.
The results of Kingsley’s efforts make his departure from the routine worthwhile. He found that in almost every case, the left pelvic bone outweighed the right. Although seemingly trivial in difference–the average left pelvic bone is a mere 10 percent larger than its right-side partner–that difference carries big weight in evolutionary significance. It suggests that mutations in the same gene may be responsible for the evolution of leglessness in animals as distantly related as 1,000-pound manatees in Florida and fish smaller than an index finger living in lakes and streams around the world.”

You have to read the whole thing to get the details, but the work suggests that the same genetic mutation is responsible for evolution of leglessness in a vast array of vertebrates – from fish, through snakes, to mammals. A surprisingly general occurence if correct. Or is it really surprising in light of everything we learned from evo-devo over the past couple of decades?

Did Joe Camel’s nose get longer?

Nicotine Up Sharply In Many Cigarettes:

The amount of nicotine in most cigarettes rose an average of almost 10 percent from 1998 to 2004, with brands most popular with young people and minorities registering the biggest increases and highest nicotine content, according to a new study. Nicotine is highly addictive, and while no one has studied the effect of the increases on smokers, the higher levels theoretically could make new smokers more easily addicted and make it harder for established smokers to quit.

Spineless for a year

Circus of the Spineless #12 is up on Sunbeam from Cucumbers. I can’t believe it’s already been a year since this fine carnival started!

Lefty and Righty excesses of pseudo-science

Lefty and Righty excesses of pseudo-scienceSince Chris Mooney’s book has just come out in paperback and the critics often invoke false equivalence between abuses of science on the Right and the Left, I thought this would be a good time to repost this August 05, 2005 post (reposted here on January 16, 2006):

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Bloggers Struggle With What to Do About Vacation

It does not really apply to everyone, but mostly to A-list political/news bloggers:
No Day at the Beach
I am an obsesssive/compulsive blogger. But on those rare occasions that I get to go out of town for a few days, I decide to enjoy myself in a computer-free zone. Let the traffic drop. It’s summer and the traffic is in the doldrums anyway. And here on SB, I can even schedule a few posts (or re-posts of old stuff) in advance to keep the blog running if I want to. Traffic will come back up once I’m back, but I also need some rest and restoration of sanity every now and then. I am not planning a vacation any time soon, but when I do, I’ll just let the blog sit and it will be just fine.
(Hat-tip: Ed)

Heat and Flow

Panta Rei is a new science carnival:

The theme is on thermal sciences related topics, from the purely technical to the academic trivia and gossip. Contributions from science and engineering bloggers with a post that is even remotely related to the above topics and at times, not at all related to but nevertheless a good science post, is also welcome. Self nominations are fine.

Check out the 1st edition on Nonoscience and the 2nd edition on Prashant Mullik’s Kyun.

I may be a Mad Scientist, but at least I am a scientist!

You Are Dr. Bunsen Honeydew

You take the title “mad scientist” to the extreme -with very scary things coming out of your lab.
And you’ve invented some pretty cool things, from a banana sharpener to a robot politician.
But while you’re busy turning gold into cottage cheese, you need to watch out for poor little Beaker!
“Oh, that’s very naughty, Beaker! Now you eat these paper clips this minute.”

(Hat-tip: Grrrrlscientist)

The First Doctor….

Frist might face fine on M.D. license renewal

The senator, a surgeon, failed to complete continuing education required by Tennessee.

And he lied about it.